RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 GINS1Q14691 196 aa16.94■□□□□ 0.3
COMMD4-213ENST00000565834 GLYR1Q49A26 553 aaPredicted RBP16.94■□□□□ 0.3
COMMD4-213ENST00000565834 ZBED5Q49AG3 693 aa16.94■□□□□ 0.3
COMMD4-213ENST00000565834 C1QL3Q5VWW1 255 aa16.94■□□□□ 0.3
COMMD4-213ENST00000565834 SLX4IPQ5VYV7 408 aa16.94■□□□□ 0.3
COMMD4-213ENST00000565834 INO80CQ6PI98 192 aaPredicted RBP16.94■□□□□ 0.3
COMMD4-213ENST00000565834 SMARCD3Q6STE5 483 aa16.94■□□□□ 0.3
COMMD4-213ENST00000565834 LRRC17Q8N6Y2 441 aa16.94■□□□□ 0.3
COMMD4-213ENST00000565834 ATP6V1C2Q8NEY4 427 aa16.94■□□□□ 0.3
COMMD4-213ENST00000565834 OR52L1Q8NGH7 329 aa16.94■□□□□ 0.3
COMMD4-213ENST00000565834 FAM81AQ8TBF8 368 aa16.94■□□□□ 0.3
COMMD4-213ENST00000565834 LIPHQ8WWY8 451 aa16.94■□□□□ 0.3
COMMD4-213ENST00000565834 MOGAT1Q96PD6 335 aa16.94■□□□□ 0.3
COMMD4-213ENST00000565834 TSSK6Q9BXA6 273 aa16.94■□□□□ 0.3
COMMD4-213ENST00000565834 RAXQ9Y2V3 346 aa16.94■□□□□ 0.3
COMMD4-213ENST00000565834 PCDHGB5Q9Y5G0 923 aa16.94■□□□□ 0.3
COMMD4-213ENST00000565834 HSPE1-MOB4S4R3N1 261 aa16.94■□□□□ 0.3
COMMD4-213ENST00000565834 TNRC6AQ8NDV7 1962 aaKnown RBP16.93■□□□□ 0.3
COMMD4-213ENST00000565834 DMXL2Q8TDJ6 3036 aa16.93■□□□□ 0.3
COMMD4-213ENST00000565834 MED12Q93074 2177 aa16.93■□□□□ 0.3
COMMD4-213ENST00000565834 PTP4A3O75365 173 aa16.93■□□□□ 0.3
COMMD4-213ENST00000565834 BGLAPP02818 100 aa16.93■□□□□ 0.3
COMMD4-213ENST00000565834 TFPIP10646 304 aa16.93■□□□□ 0.3
COMMD4-213ENST00000565834 BMP7P18075 431 aa16.93■□□□□ 0.3
COMMD4-213ENST00000565834 IL11P20809 199 aa16.93■□□□□ 0.3
COMMD4-213ENST00000565834 ELK4P28324 431 aa16.93■□□□□ 0.3
COMMD4-213ENST00000565834 GIPRP48546 466 aa16.93■□□□□ 0.3
COMMD4-213ENST00000565834 MEOX1P50221 254 aa16.93■□□□□ 0.3
COMMD4-213ENST00000565834 SMSP52788 366 aa16.93■□□□□ 0.3
COMMD4-213ENST00000565834 UCNP55089 124 aa16.93■□□□□ 0.3
COMMD4-213ENST00000565834 CDC42P60953 191 aa16.93■□□□□ 0.3
COMMD4-213ENST00000565834 TMEM44Q2T9K0 475 aa16.93■□□□□ 0.3
COMMD4-213ENST00000565834 CLEC12AQ5QGZ9 265 aa16.93■□□□□ 0.3
COMMD4-213ENST00000565834 FAM69AQ5T7M9 428 aa16.93■□□□□ 0.3
COMMD4-213ENST00000565834 SLC27A4Q6P1M0 643 aa16.93■□□□□ 0.3
COMMD4-213ENST00000565834 CCDC71Q8IV32 467 aaPredicted RBP16.93■□□□□ 0.3
COMMD4-213ENST00000565834 IQCF1Q8N6M8 205 aa16.93■□□□□ 0.3
COMMD4-213ENST00000565834 OR14L1PQ8NHC6 308 aa16.93■□□□□ 0.3
COMMD4-213ENST00000565834 SLC25A43Q8WUT9 341 aaPredicted RBP16.93■□□□□ 0.3
COMMD4-213ENST00000565834 TM9SF4Q92544 642 aa16.93■□□□□ 0.3
COMMD4-213ENST00000565834 SAMD8Q96LT4 415 aa16.93■□□□□ 0.3
COMMD4-213ENST00000565834 NR1H4Q96RI1 486 aaPredicted RBP16.93■□□□□ 0.3
COMMD4-213ENST00000565834 TNFRSF13CQ96RJ3 184 aa16.93■□□□□ 0.3
COMMD4-213ENST00000565834 PIGQQ9BRB3 760 aa16.93■□□□□ 0.3
COMMD4-213ENST00000565834 PTDSS2Q9BVG9 487 aa16.93■□□□□ 0.3
COMMD4-213ENST00000565834 FKRPQ9H9S5 495 aa16.93■□□□□ 0.3
COMMD4-213ENST00000565834 SLC25A19Q9HC21 320 aa16.93■□□□□ 0.3
COMMD4-213ENST00000565834 PNPLA3Q9NST1 481 aa16.93■□□□□ 0.3
COMMD4-213ENST00000565834 IMPAD1Q9NX62 359 aa16.93■□□□□ 0.3
COMMD4-213ENST00000565834 MRPS18CQ9Y3D5 142 aaKnown RBP16.93■□□□□ 0.3
COMMD4-213ENST00000565834 PCDHGA9Q9Y5G4 932 aaKnown RBP16.93■□□□□ 0.3
COMMD4-213ENST00000565834 LOC400499M0QZD8 3231 aa16.93■□□□□ 0.3
COMMD4-213ENST00000565834 ANKRD11Q6UB99 2663 aaPredicted RBP16.93■□□□□ 0.3
COMMD4-213ENST00000565834 H3BML4 177 aa16.92■□□□□ 0.3
COMMD4-213ENST00000565834 OR2T1O43869 369 aa16.92■□□□□ 0.3
COMMD4-213ENST00000565834 TRAPPC6AO75865 159 aa16.92■□□□□ 0.3
COMMD4-213ENST00000565834 MT-ATP6P00846 226 aa16.92■□□□□ 0.3
COMMD4-213ENST00000565834 PEPDP12955 493 aa16.92■□□□□ 0.3
COMMD4-213ENST00000565834 FKBP2P26885 142 aaKnown RBP16.92■□□□□ 0.3
COMMD4-213ENST00000565834 TMPRSS3P57727 454 aa16.92■□□□□ 0.3
COMMD4-213ENST00000565834 FXYD6P3P58550 94 aa16.92■□□□□ 0.3
COMMD4-213ENST00000565834 ISL1P61371 349 aa16.92■□□□□ 0.3
COMMD4-213ENST00000565834 CDK5Q00535 292 aa16.92■□□□□ 0.3
COMMD4-213ENST00000565834 PLGLB1Q02325 96 aa16.92■□□□□ 0.3
COMMD4-213ENST00000565834 LTBQ06643 244 aa16.92■□□□□ 0.3
COMMD4-213ENST00000565834 SYT14P1Q58G82 188 aa16.92■□□□□ 0.3
COMMD4-213ENST00000565834 DEPDC4Q8N2C3 294 aa16.92■□□□□ 0.3
COMMD4-213ENST00000565834 FAM83FQ8NEG4 500 aaPredicted RBP16.92■□□□□ 0.3
COMMD4-213ENST00000565834 SLC39A7Q92504 469 aa16.92■□□□□ 0.3
COMMD4-213ENST00000565834 DNAJA3Q96EY1 480 aa16.92■□□□□ 0.3
COMMD4-213ENST00000565834 UBL7Q96S82 380 aaPredicted RBP16.92■□□□□ 0.3
COMMD4-213ENST00000565834 POTEKPQ9BYX7 375 aa16.92■□□□□ 0.3
COMMD4-213ENST00000565834 TTTY12Q9BZ98 90 aa16.92■□□□□ 0.3
COMMD4-213ENST00000565834 OR2B2Q9GZK3 357 aa16.92■□□□□ 0.3
COMMD4-213ENST00000565834 ZNF703Q9H7S9 590 aaPredicted RBP16.92■□□□□ 0.3
COMMD4-213ENST00000565834 MCCC2Q9HCC0 563 aa16.92■□□□□ 0.3
COMMD4-213ENST00000565834 IL20RAQ9UHF4 553 aa16.92■□□□□ 0.3
COMMD4-213ENST00000565834 ZNF229Q9UJW7 825 aa16.92■□□□□ 0.3
COMMD4-213ENST00000565834 CSAG2Q9Y5P2 127 aa16.92■□□□□ 0.3
COMMD4-213ENST00000565834 TRAV17A0A0B4J275 112 aa16.91■□□□□ 0.3
COMMD4-213ENST00000565834 OR2M5A3KFT3 312 aa16.91■□□□□ 0.3
COMMD4-213ENST00000565834 HIST1H2ABP04908 130 aa16.91■□□□□ 0.3
COMMD4-213ENST00000565834 RPSAP08865 295 aaKnown RBP16.91■□□□□ 0.3
COMMD4-213ENST00000565834 ASAH2BP0C7U1 165 aa16.91■□□□□ 0.3
COMMD4-213ENST00000565834 RFC3P40938 356 aa16.91■□□□□ 0.3
COMMD4-213ENST00000565834 CD47Q08722 323 aa16.91■□□□□ 0.3
COMMD4-213ENST00000565834 FHL1Q13642 323 aa16.91■□□□□ 0.3
COMMD4-213ENST00000565834 C12orf73Q69YU5 71 aa16.91■□□□□ 0.3
COMMD4-213ENST00000565834 BORAQ6PGQ7 559 aa16.91■□□□□ 0.3
COMMD4-213ENST00000565834 UGT2A3Q6UWM9 527 aa16.91■□□□□ 0.3
COMMD4-213ENST00000565834 CASP12Q6UXS9 341 aa16.91■□□□□ 0.3
COMMD4-213ENST00000565834 HIST3H2AQ7L7L0 130 aa16.91■□□□□ 0.3
COMMD4-213ENST00000565834 MAMDC2Q7Z304 686 aaPredicted RBP16.91■□□□□ 0.3
COMMD4-213ENST00000565834 YRDCQ86U90 279 aaKnown RBP16.91■□□□□ 0.3
COMMD4-213ENST00000565834 SLC43A2Q8N370 569 aa16.91■□□□□ 0.3
COMMD4-213ENST00000565834 OR2T33Q8NG76 320 aa16.91■□□□□ 0.3
COMMD4-213ENST00000565834 OR6S1Q8NH40 331 aa16.91■□□□□ 0.3
COMMD4-213ENST00000565834 HIST1H2ACQ93077 130 aa16.91■□□□□ 0.3
COMMD4-213ENST00000565834 RELTQ969Z4 430 aa16.91■□□□□ 0.3
COMMD4-213ENST00000565834 SLC25A36Q96CQ1 311 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms