RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 UHRF2Q96PU4 802 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 OR5B12Q96R08 314 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 ERGIC2Q96RQ1 377 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 CDCA3Q99618 268 aaPredicted RBP2.81□□□□□ -1.96
CHD9-216ENST00000565803 SYT3Q9BQG1 590 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 PAAF1Q9BRP4 392 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 TMEM109Q9BVC6 243 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 PTDSS2Q9BVG9 487 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 DDX31Q9H8H2 851 aaKnown RBP2.81□□□□□ -1.96
CHD9-216ENST00000565803 SAP30LQ9HAJ7 183 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 DNAJC4Q9NNZ3 241 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 EXOSC4Q9NPD3 245 aaKnown RBP2.81□□□□□ -1.96
CHD9-216ENST00000565803 INPP5EQ9NRR6 644 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 RLIMQ9NVW2 624 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 SEMA5BQ9P283 1151 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 ABI3Q9P2A4 366 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 EPHA6Q9UF33 1036 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 SLC12A6Q9UHW9 1150 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 MUTYHQ9UIF7 546 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 NDRG2Q9UN36 371 aaKnown RBP2.81□□□□□ -1.96
CHD9-216ENST00000565803 ETV7Q9Y603 341 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 ALG6Q9Y672 507 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 CACNA1GO43497 2377 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 MUC22E2RYF6 1773 aaPredicted RBP2.81□□□□□ -1.96
CHD9-216ENST00000565803 CACNA1BQ00975 2339 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 SCN5AQ14524 2016 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 FAM95CA0A1B0GW59 222 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 ILVBLA1L0T0 632 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 LRP5LA4QPB2 252 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 NKX6-3A6NJ46 265 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 SAGE2PA6NJ88 616 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 H0YL77 283 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 ARPC5O15511 151 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 MSI1O43347 362 aaKnown RBP2.81□□□□□ -1.96
CHD9-216ENST00000565803 PCDH7O60245 1069 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 LDB3O75112 727 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 CTDNEP1O95476 244 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 TSPAN12O95859 305 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 GOT2P00505 430 aaKnown RBP2.81□□□□□ -1.96
CHD9-216ENST00000565803 GASTP01350 101 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 VTNP04004 478 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 TYMSP04818 313 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 SPATA31C1P0DKV0 1188 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 UQCRBP14927 111 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 PNLIPP16233 465 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 TEAD1P28347 426 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 RPL35P42766 123 aaKnown RBP2.81□□□□□ -1.96
CHD9-216ENST00000565803 TNFRSF4P43489 277 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 LHX1P48742 406 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 P2RY4P51582 365 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 OR4D2P58180 307 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 LOXL3P58215 753 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 ERVK-8P63133 956 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 CXADRP78310 365 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 DUSP8Q13202 625 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 SELENBP1Q13228 472 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 TPBGQ13641 420 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 QRICH1Q2TAL8 776 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 FNBP1LQ5T0N5 605 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 ABHD17BQ5VST6 288 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 RNF43Q68DV7 783 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 LINGO2Q7L985 606 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 SLC29A4Q7RTT9 530 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 CMTM1Q8IZ96 169 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 FITM2Q8N6M3 262 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.81□□□□□ -1.96
CHD9-216ENST00000565803 EME1Q96AY2 570 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 NSL1Q96IY1 281 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 CLCC1Q96S66 551 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 SLC35A5Q9BS91 424 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 ZNF717Q9BY31 904 aaPredicted RBP2.81□□□□□ -1.96
CHD9-216ENST00000565803 NMUR2Q9GZQ4 415 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 PORCNQ9H237 461 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 ENY2Q9NPA8 101 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 DUSP22Q9NRW4 184 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 NECAP2Q9NVZ3 263 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 IMPAD1Q9NX62 359 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 ZNHIT2Q9UHR6 403 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 NUP50Q9UKX7 468 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 POMT2Q9UKY4 750 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 B9D1Q9UPM9 204 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 SLC6A5Q9Y345 797 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 HCFC2Q9Y5Z7 792 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 ZBED9Q6R2W3 1325 aa2.81□□□□□ -1.96
CHD9-216ENST00000565803 PLXND1Q9Y4D7 1925 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 TRAV8-7A0A075B6U6 113 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 A0A1W2PRG6 482 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 CCT8L1PA6NM43 557 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 DISC1C4P0D8 188 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 GMDSO60547 372 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 PEX10O60683 326 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 C1RP00736 705 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 ERBB2P04626 1255 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 GSTA1P08263 222 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 FAM87AP0C7U9 286 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 SERPINB5P36952 375 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 RGRP47804 291 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 EPHA5P54756 1037 aa2.8□□□□□ -1.96
CHD9-216ENST00000565803 UCNP55089 124 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms