RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 BEX5Q5H9J7 111 aa12.09□□□□□ -0.47
VPS9D1-204ENST00000565023 NET1Q7Z628 596 aaPredicted RBP12.09□□□□□ -0.47
VPS9D1-204ENST00000565023 PTOV1Q86YD1 416 aa12.09□□□□□ -0.47
VPS9D1-204ENST00000565023 CCDC103Q8IW40 242 aa12.09□□□□□ -0.47
VPS9D1-204ENST00000565023 CLIP4Q8N3C7 705 aa12.09□□□□□ -0.47
VPS9D1-204ENST00000565023 OR8J3Q8NGG0 315 aa12.09□□□□□ -0.47
VPS9D1-204ENST00000565023 NFKBIDQ8NI38 313 aa12.09□□□□□ -0.47
VPS9D1-204ENST00000565023 BBS10Q8TAM1 723 aa12.09□□□□□ -0.47
VPS9D1-204ENST00000565023 DDIT4LQ96D03 193 aa12.09□□□□□ -0.47
VPS9D1-204ENST00000565023 PLPPR2Q96GM1 343 aa12.09□□□□□ -0.47
VPS9D1-204ENST00000565023 POM121Q96HA1 1249 aa12.09□□□□□ -0.47
VPS9D1-204ENST00000565023 SH3GL1Q99961 368 aa12.09□□□□□ -0.47
VPS9D1-204ENST00000565023 BCO1Q9HAY6 547 aa12.09□□□□□ -0.47
VPS9D1-204ENST00000565023 GID8Q9NWU2 228 aa12.09□□□□□ -0.47
VPS9D1-204ENST00000565023 ZNF232Q9UNY5 417 aa12.09□□□□□ -0.47
VPS9D1-204ENST00000565023 ZNF814B7Z6K7 855 aa12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 KLF4O43474 513 aa12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 FAM107AO95990 144 aa12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 IMPDH2P12268 514 aa12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 CD99P14209 185 aa12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 PPP3CBP16298 524 aa12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 PSMB1P20618 241 aaKnown RBP12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 CXCR1P25024 350 aa12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 HTR3AP46098 478 aa12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 OR3A2P47893 321 aa12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 GZMMP51124 257 aa12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 COPZ1P61923 177 aa12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 HOXC5Q00444 222 aa12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 SCARB2Q14108 478 aa12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 ZSWIM7Q19AV6 140 aa12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 RABL3Q5HYI8 236 aa12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 ZNF311Q5JNZ3 666 aa12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 SFRP5Q5T4F7 317 aa12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 ABLIM2Q6H8Q1 611 aa12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 REEP3Q6NUK4 255 aa12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 GALNT5Q7Z7M9 940 aa12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 SERPINA11Q86U17 422 aa12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 ZNF440Q8IYI8 595 aa12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 GABRG1Q8N1C3 465 aa12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 UBE2J2Q8N2K1 259 aa12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 ANKS4BQ8N8V4 417 aa12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 STEAP2Q8NFT2 490 aa12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 KISS1RQ969F8 398 aaPredicted RBP12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 RCN3Q96D15 328 aa12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 CMTM5Q96DZ9 223 aa12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 ALPK1Q96QP1 1244 aa12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 TACO1Q9BSH4 297 aaKnown RBP12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 GP6Q9HCN6 339 aa12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 TMEM181Q9P2C4 612 aa12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 NOSIPQ9Y314 301 aaKnown RBP12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 IFT52Q9Y366 437 aa12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 HDGFL3Q9Y3E1 203 aa12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 CHST2Q9Y4C5 530 aa12.08□□□□□ -0.48
VPS9D1-204ENST00000565023 CDHR4A6H8M9 788 aa12.07□□□□□ -0.48
VPS9D1-204ENST00000565023 CLOCKO15516 846 aa12.07□□□□□ -0.48
VPS9D1-204ENST00000565023 PMS2P2O95744 297 aa12.07□□□□□ -0.48
VPS9D1-204ENST00000565023 ROS1P08922 2347 aa12.07□□□□□ -0.48
VPS9D1-204ENST00000565023 FPR1P21462 350 aa12.07□□□□□ -0.48
VPS9D1-204ENST00000565023 SLC6A2P23975 617 aa12.07□□□□□ -0.48
VPS9D1-204ENST00000565023 LOXP28300 417 aaPredicted RBP12.07□□□□□ -0.48
VPS9D1-204ENST00000565023 PRDX6P30041 224 aa12.07□□□□□ -0.48
VPS9D1-204ENST00000565023 ACAA2P42765 397 aaKnown RBP12.07□□□□□ -0.48
VPS9D1-204ENST00000565023 SLC1A3P43003 542 aa12.07□□□□□ -0.48
VPS9D1-204ENST00000565023 FOXD4Q12950 439 aaPredicted RBP12.07□□□□□ -0.48
VPS9D1-204ENST00000565023 OR7A5Q15622 319 aa12.07□□□□□ -0.48
VPS9D1-204ENST00000565023 TAB1Q15750 504 aa12.07□□□□□ -0.48
VPS9D1-204ENST00000565023 ACKR1Q16570 336 aa12.07□□□□□ -0.48
VPS9D1-204ENST00000565023 CYP51A1Q16850 503 aa12.07□□□□□ -0.48
VPS9D1-204ENST00000565023 RNF220Q5VTB9 566 aa12.07□□□□□ -0.48
VPS9D1-204ENST00000565023 ZNF704Q6ZNC4 412 aaPredicted RBP12.07□□□□□ -0.48
VPS9D1-204ENST00000565023 BHLHA15Q7RTS1 189 aaPredicted RBP12.07□□□□□ -0.48
VPS9D1-204ENST00000565023 CALHM3Q86XJ0 350 aa12.07□□□□□ -0.48
VPS9D1-204ENST00000565023 TGIF2LYQ8IUE0 185 aa12.07□□□□□ -0.48
VPS9D1-204ENST00000565023 C11orf65Q8NCR3 313 aa12.07□□□□□ -0.48
VPS9D1-204ENST00000565023 HIPK4Q8NE63 616 aa12.07□□□□□ -0.48
VPS9D1-204ENST00000565023 OR10A6Q8NH74 314 aa12.07□□□□□ -0.48
VPS9D1-204ENST00000565023 PIGXQ8TBF5 258 aa12.07□□□□□ -0.48
VPS9D1-204ENST00000565023 CCL19Q99731 98 aa12.07□□□□□ -0.48
VPS9D1-204ENST00000565023 SPATA9Q9BWV2 254 aa12.07□□□□□ -0.48
VPS9D1-204ENST00000565023 CXXC4Q9H2H0 198 aa12.07□□□□□ -0.48
VPS9D1-204ENST00000565023 EFCAB1Q9HAE3 211 aa12.07□□□□□ -0.48
VPS9D1-204ENST00000565023 EMC3Q9P0I2 261 aa12.07□□□□□ -0.48
VPS9D1-204ENST00000565023 RAI1Q7Z5J4 1906 aaPredicted RBP12.06□□□□□ -0.48
VPS9D1-204ENST00000565023 ZNF716A6NP11 495 aa12.06□□□□□ -0.48
VPS9D1-204ENST00000565023 ZNF724A8MTY0 619 aa12.06□□□□□ -0.48
VPS9D1-204ENST00000565023 FAAHO00519 579 aa12.06□□□□□ -0.48
VPS9D1-204ENST00000565023 AIM2O14862 343 aa12.06□□□□□ -0.48
VPS9D1-204ENST00000565023 DCTN3O75935 186 aa12.06□□□□□ -0.48
VPS9D1-204ENST00000565023 AQP1P29972 269 aa12.06□□□□□ -0.48
VPS9D1-204ENST00000565023 PCGF2P35227 344 aa12.06□□□□□ -0.48
VPS9D1-204ENST00000565023 CLK1P49759 484 aaKnown RBP12.06□□□□□ -0.48
VPS9D1-204ENST00000565023 PCBP3P57721 371 aaKnown RBP12.06□□□□□ -0.48
VPS9D1-204ENST00000565023 ADAM8P78325 824 aa12.06□□□□□ -0.48
VPS9D1-204ENST00000565023 SLC35A1P78382 337 aa12.06□□□□□ -0.48
VPS9D1-204ENST00000565023 ITGADQ13349 1161 aa12.06□□□□□ -0.48
VPS9D1-204ENST00000565023 CEACAM7Q14002 265 aa12.06□□□□□ -0.48
VPS9D1-204ENST00000565023 GKAP1Q5VSY0 366 aaPredicted RBP12.06□□□□□ -0.48
VPS9D1-204ENST00000565023 C9orf135Q5VTT2 229 aa12.06□□□□□ -0.48
VPS9D1-204ENST00000565023 WBP2NLQ6ICG8 309 aa12.06□□□□□ -0.48
VPS9D1-204ENST00000565023 C8orf82Q6P1X6 216 aaPredicted RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms