RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 INSM2Q96T92 566 aaPredicted RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 ZFC3H1O60293 1989 aaKnown RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 GXYLT2A0PJZ3 443 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 E5RGE8 158 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 FZD6O60353 706 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 RAD1O60671 282 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 CRTAPO75718 401 aaPredicted RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 CSN2P05814 226 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 SSR2P43308 183 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 TAS2R41P59536 307 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 IL5RAQ01344 420 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 PIN1Q13526 163 aaPredicted RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 UGT8Q16880 541 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 ALKBH2Q6NS38 261 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 FAM111BQ6SJ93 734 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 TMIGD1Q6UXZ0 262 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 TPRG1Q6ZUI0 275 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 ZNF283Q8N7M2 679 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 FBXO15Q8NCQ5 510 aaPredicted RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 NAXEQ8NCW5 288 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 TMEM52Q8NDY8 209 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 ZNF417Q8TAU3 575 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 ZNF583Q96ND8 569 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 ZNF416Q9BWM5 594 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 NKX6-2Q9C056 277 aaPredicted RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 TMEM185BQ9H7F4 350 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 ACOT13Q9NPJ3 140 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 ZNF275Q9NSD4 429 aaPredicted RBP3.12□□□□□ -1.91
CHD9-213ENST00000564845 AIG1Q9NVV5 245 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 ANKRD10Q9NXR5 420 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 RIMS3Q9UJD0 308 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 MAB21L2Q9Y586 359 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 TTC28Q96AY4 2481 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 AGAP5A6NIR3 686 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 DSCR3O14972 297 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 SULT1B1O43704 296 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 B4GALT2O60909 372 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 CXCL10P02778 98 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 CSF1P09603 554 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 MAKP20794 623 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 LIPAP38571 399 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 SKP2Q13309 424 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 SQSTM1Q13501 440 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 DEFB134Q4QY38 66 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 LIN52Q52LA3 116 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 CCNYL2Q5T2Q4 361 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 ATG9BQ674R7 924 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 FIBINQ8TAL6 211 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 FER1L6-AS2Q96M78 137 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 RBP7Q96R05 134 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 TRIB1Q96RU8 372 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 CRISPLD2Q9H0B8 497 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 SPTBP11277 2137 aa3.12□□□□□ -1.91
CHD9-213ENST00000564845 TNFRSF10AO00220 468 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 RAB5CP51148 216 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 DLEU7Q6UYE1 221 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 SSX9Q7RTT3 188 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 SERPINA12Q8IW75 414 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 MSRB3Q8IXL7 192 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 OR13H1Q8NG92 308 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 SGCZQ96LD1 299 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 CTRCQ99895 268 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 OR2B2Q9GZK3 357 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 SRMSQ9H3Y6 488 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 MCTS1Q9ULC4 181 aaKnown RBP3.11□□□□□ -1.91
CHD9-213ENST00000564845 RPH3AQ9Y2J0 694 aaPredicted RBP3.11□□□□□ -1.91
CHD9-213ENST00000564845 A0A1W2PP18 115 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 A0A1W2PQU0 124 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 SHISA8B8ZZ34 492 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 M0R233 179 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 SLC2A10O95528 541 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 TBX6O95947 436 aaPredicted RBP3.11□□□□□ -1.91
CHD9-213ENST00000564845 STAG3L2P0CL84 134 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 HOXB2P14652 356 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 GSK3AP49840 483 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 CRYBA2P53672 197 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 TRA2AQ13595 282 aaKnown RBP eCLIP3.11□□□□□ -1.91
CHD9-213ENST00000564845 GRM7Q14831 915 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 SLC5A12Q1EHB4 618 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 PRRT3Q5FWE3 981 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 PERM1Q5SV97 790 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 SLC27A4Q6P1M0 643 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 OPN5Q6U736 354 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 GRAMD2AQ8IUY3 354 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 ZNF595Q8IYB9 648 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 ESX1Q8N693 406 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 OR4D11Q8NGI4 311 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 NUS1Q96E22 293 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 SLC46A1Q96NT5 459 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 KCNJ15Q99712 375 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 EXO1Q9UQ84 846 aaKnown RBP3.11□□□□□ -1.91
CHD9-213ENST00000564845 C2orf16Q68DN1 1984 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 KIR2DS1A0A191URI9 304 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 PRAMEF25A6NGN4 478 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 FBLL1A6NHQ2 334 aaKnown RBP3.11□□□□□ -1.91
CHD9-213ENST00000564845 SSX4O60224 188 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 MRPL3P09001 348 aaKnown RBP3.11□□□□□ -1.91
CHD9-213ENST00000564845 OR12D1P0DN82 309 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 NPPBP16860 134 aa3.11□□□□□ -1.91
CHD9-213ENST00000564845 KIR2DS4P43632 304 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms