RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 SLC6A19Q695T7 634 aa18.88■□□□□ 0.61
MAP1LC3B-206ENST00000564844 SLC48A1Q6P1K1 146 aa18.88■□□□□ 0.61
MAP1LC3B-206ENST00000564844 GLDNQ6ZMI3 551 aaPredicted RBP18.88■□□□□ 0.61
MAP1LC3B-206ENST00000564844 CDK20Q8IZL9 346 aa18.88■□□□□ 0.61
MAP1LC3B-206ENST00000564844 SLC39A11Q8N1S5 342 aa18.88■□□□□ 0.61
MAP1LC3B-206ENST00000564844 WASH6PQ9NQA3 447 aa18.88■□□□□ 0.61
MAP1LC3B-206ENST00000564844 PRRT4C9JH25 899 aa18.88■□□□□ 0.61
MAP1LC3B-206ENST00000564844 TBX19O60806 448 aa18.88■□□□□ 0.61
MAP1LC3B-206ENST00000564844 EFEMP2O95967 443 aa18.88■□□□□ 0.61
MAP1LC3B-206ENST00000564844 MAS1P04201 325 aa18.88■□□□□ 0.61
MAP1LC3B-206ENST00000564844 LIPCP11150 499 aa18.88■□□□□ 0.61
MAP1LC3B-206ENST00000564844 PRDX1Q06830 199 aaKnown RBP18.88■□□□□ 0.61
MAP1LC3B-206ENST00000564844 LGALS3BPQ08380 585 aa18.88■□□□□ 0.61
MAP1LC3B-206ENST00000564844 MLF2Q15773 248 aaPredicted RBP18.88■□□□□ 0.61
MAP1LC3B-206ENST00000564844 LNX2Q8N448 690 aa18.88■□□□□ 0.61
MAP1LC3B-206ENST00000564844 TNFAIP8L1Q8WVP5 186 aa18.88■□□□□ 0.61
MAP1LC3B-206ENST00000564844 CHST6Q9GZX3 395 aa18.88■□□□□ 0.61
MAP1LC3B-206ENST00000564844 ANKRD10Q9NXR5 420 aa18.88■□□□□ 0.61
MAP1LC3B-206ENST00000564844 ABRACLQ9P1F3 81 aa18.88■□□□□ 0.61
MAP1LC3B-206ENST00000564844 KCNE5Q9UJ90 142 aa18.88■□□□□ 0.61
MAP1LC3B-206ENST00000564844 NPTNQ9Y639 398 aa18.88■□□□□ 0.61
MAP1LC3B-206ENST00000564844 LRRK1Q38SD2 2015 aa18.88■□□□□ 0.61
MAP1LC3B-206ENST00000564844 LAMA1P25391 3075 aa18.88■□□□□ 0.61
MAP1LC3B-206ENST00000564844 IGLON5A6NGN9 336 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 HIDE1A8MVS5 230 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 LDB3O75112 727 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 RASGRP1O95267 797 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 ZNF3P17036 446 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 VIPR2P41587 438 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 RPS11P62280 158 aaKnown RBP eCLIP18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 ERVK-25P63136 954 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 MRM1Q6IN84 353 aaKnown RBP18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 THEM6Q8WUY1 208 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 ADAT1Q9BUB4 502 aaKnown RBP18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 EVA1AQ9H8M9 152 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 SLC6A20Q9NP91 592 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 SIGLEC7Q9Y286 467 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 TRAPPC13A5PLN9 417 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 RAD1O60671 282 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 ARL6IP5O75915 188 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 GAAP10253 952 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 ADRB3P13945 408 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 HIST1H1CP16403 213 aaKnown RBP18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 NDUFS1P28331 727 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 PRKAR1BP31321 381 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 DYRK1AQ13627 763 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 GSG1LQ6UXU4 331 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 NDUFAF7Q7L592 441 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 BVESQ8NE79 360 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 ZPLD1Q8TCW7 415 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 BRIX1Q8TDN6 353 aaKnown RBP18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 GIMAP5Q96F15 307 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 TSSK2Q96PF2 358 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 C2orf42Q9NWW7 574 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 PLXNA2O75051 1894 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 TGM6O95932 706 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 P2RX1P51575 399 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 CDK5R1Q15078 307 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 DEFB134Q4QY38 66 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 UBE2NLQ5JXB2 153 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 MTSS1LQ765P7 747 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 ZAR1Q86SH2 424 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 PAQR7Q86WK9 346 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 GJD3Q8N144 294 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 SLC25A28Q96A46 364 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 MENTQ9BUN1 341 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 ANKRD19PQ9H560 264 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 SLC35A3Q9Y2D2 325 aa18.87■□□□□ 0.61
MAP1LC3B-206ENST00000564844 SDC3O75056 442 aa18.86■□□□□ 0.61
MAP1LC3B-206ENST00000564844 GALP22466 123 aa18.86■□□□□ 0.61
MAP1LC3B-206ENST00000564844 RPL4P36578 427 aaKnown RBP18.86■□□□□ 0.61
MAP1LC3B-206ENST00000564844 EIF2B5Q13144 721 aaKnown RBP18.86■□□□□ 0.61
MAP1LC3B-206ENST00000564844 CBFBQ13951 182 aa18.86■□□□□ 0.61
MAP1LC3B-206ENST00000564844 EXOSC7Q15024 291 aaKnown RBP18.86■□□□□ 0.61
MAP1LC3B-206ENST00000564844 RANBP3LQ86VV4 465 aaPredicted RBP18.86■□□□□ 0.61
MAP1LC3B-206ENST00000564844 OR1S1Q8NH92 325 aa18.86■□□□□ 0.61
MAP1LC3B-206ENST00000564844 NMNAT3Q96T66 252 aa18.86■□□□□ 0.61
MAP1LC3B-206ENST00000564844 MICU1Q9BPX6 476 aa18.86■□□□□ 0.61
MAP1LC3B-206ENST00000564844 ZNF416Q9BWM5 594 aa18.86■□□□□ 0.61
MAP1LC3B-206ENST00000564844 ZNF230Q9UIE0 474 aaPredicted RBP18.86■□□□□ 0.61
MAP1LC3B-206ENST00000564844 ING1Q9UK53 422 aaPredicted RBP18.86■□□□□ 0.61
MAP1LC3B-206ENST00000564844 IER3IP1Q9Y5U9 82 aa18.86■□□□□ 0.61
MAP1LC3B-206ENST00000564844 ABHD14A-ACY1A0A1B0GW23 586 aa18.86■□□□□ 0.61
MAP1LC3B-206ENST00000564844 LRRC72A6NJI9 287 aa18.86■□□□□ 0.61
MAP1LC3B-206ENST00000564844 B3GALNT1O75752 331 aa18.86■□□□□ 0.61
MAP1LC3B-206ENST00000564844 IFNGR1P15260 489 aa18.86■□□□□ 0.61
MAP1LC3B-206ENST00000564844 MLC1Q15049 377 aa18.86■□□□□ 0.61
MAP1LC3B-206ENST00000564844 PCGF3Q3KNV8 242 aa18.86■□□□□ 0.61
MAP1LC3B-206ENST00000564844 MFSD12Q6NUT3 480 aa18.86■□□□□ 0.61
MAP1LC3B-206ENST00000564844 PDZD9Q8IXQ8 264 aa18.86■□□□□ 0.61
MAP1LC3B-206ENST00000564844 LRRC46Q96FV0 321 aa18.86■□□□□ 0.61
MAP1LC3B-206ENST00000564844 SDF2Q99470 211 aa18.86■□□□□ 0.61
MAP1LC3B-206ENST00000564844 EPHX3Q9H6B9 360 aa18.86■□□□□ 0.61
MAP1LC3B-206ENST00000564844 MTHFD2LQ9H903 347 aaPredicted RBP18.86■□□□□ 0.61
MAP1LC3B-206ENST00000564844 PCDHB16Q9NRJ7 776 aa18.86■□□□□ 0.61
MAP1LC3B-206ENST00000564844 MYEF2Q9P2K5 600 aaKnown RBP18.86■□□□□ 0.61
MAP1LC3B-206ENST00000564844 A0A1B0GUH1 482 aa18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 OR2W5A6NFC9 320 aa18.85■□□□□ 0.61
MAP1LC3B-206ENST00000564844 RCBTB2O95199 551 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms