RNA–Protein interactions for RNA: ENST00000564815.5

COMMD4-211, Transcript of COMM domain containing 4, humanhuman

TSL 3 BASIC

Gene COMMD4, Length 639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-211ENST00000564815 GSTA3Q16772 222 aa12.45□□□□□ -0.42
COMMD4-211ENST00000564815 DPY19L1Q2PZI1 675 aa12.45□□□□□ -0.42
COMMD4-211ENST00000564815 IQCCQ4KMZ1 466 aa12.45□□□□□ -0.42
COMMD4-211ENST00000564815 C9orf135Q5VTT2 229 aa12.45□□□□□ -0.42
COMMD4-211ENST00000564815 TMEM225Q6GV28 225 aa12.45□□□□□ -0.42
COMMD4-211ENST00000564815 EMBQ6PCB8 327 aa12.45□□□□□ -0.42
COMMD4-211ENST00000564815 PAQR6Q6TCH4 344 aa12.45□□□□□ -0.42
COMMD4-211ENST00000564815 B3GLCTQ6Y288 498 aa12.45□□□□□ -0.42
COMMD4-211ENST00000564815 AAED1Q7RTV5 226 aa12.45□□□□□ -0.42
COMMD4-211ENST00000564815 TRIML2Q8N7C3 387 aa12.45□□□□□ -0.42
COMMD4-211ENST00000564815 NEURL3Q96EH8 262 aa12.45□□□□□ -0.42
COMMD4-211ENST00000564815 DNAJA3Q96EY1 480 aa12.45□□□□□ -0.42
COMMD4-211ENST00000564815 SF3B5Q9BWJ5 86 aaKnown RBP12.45□□□□□ -0.42
COMMD4-211ENST00000564815 ROPN1BQ9BZX4 212 aaPredicted RBP12.45□□□□□ -0.42
COMMD4-211ENST00000564815 ROPN1Q9HAT0 212 aaPredicted RBP12.45□□□□□ -0.42
COMMD4-211ENST00000564815 MOV10Q9HCE1 1003 aaKnown RBP12.45□□□□□ -0.42
COMMD4-211ENST00000564815 SLC7A10Q9NS82 523 aa12.45□□□□□ -0.42
COMMD4-211ENST00000564815 CENPVL1A0A0U1RR11 272 aa12.44□□□□□ -0.42
COMMD4-211ENST00000564815 LOC390937A0A1W2PQ73 354 aa12.44□□□□□ -0.42
COMMD4-211ENST00000564815 OR6C65A6NJZ3 312 aa12.44□□□□□ -0.42
COMMD4-211ENST00000564815 CRYAAP02489 173 aa12.44□□□□□ -0.42
COMMD4-211ENST00000564815 C8BP07358 591 aa12.44□□□□□ -0.42
COMMD4-211ENST00000564815 BPGMP07738 259 aa12.44□□□□□ -0.42
COMMD4-211ENST00000564815 ERCC1P07992 297 aaPredicted RBP12.44□□□□□ -0.42
COMMD4-211ENST00000564815 APEHP13798 732 aaKnown RBP12.44□□□□□ -0.42
COMMD4-211ENST00000564815 IL7RP16871 459 aa12.44□□□□□ -0.42
COMMD4-211ENST00000564815 CDH2P19022 906 aaPredicted RBP12.44□□□□□ -0.42
COMMD4-211ENST00000564815 CXCR1P25024 350 aa12.44□□□□□ -0.42
COMMD4-211ENST00000564815 S100A3P33764 101 aa12.44□□□□□ -0.42
COMMD4-211ENST00000564815 SERPINF1P36955 418 aa12.44□□□□□ -0.42
COMMD4-211ENST00000564815 UBE2NP61088 152 aaKnown RBP12.44□□□□□ -0.42
COMMD4-211ENST00000564815 SLC17A1Q14916 467 aa12.44□□□□□ -0.42
COMMD4-211ENST00000564815 CARTPTQ16568 116 aa12.44□□□□□ -0.42
COMMD4-211ENST00000564815 TSPO2Q5TGU0 170 aa12.44□□□□□ -0.42
COMMD4-211ENST00000564815 SAXO2Q658L1 398 aa12.44□□□□□ -0.42
COMMD4-211ENST00000564815 FRRS1Q6ZNA5 592 aa12.44□□□□□ -0.42
COMMD4-211ENST00000564815 OLIG3Q7RTU3 272 aa12.44□□□□□ -0.42
COMMD4-211ENST00000564815 ZNF440Q8IYI8 595 aa12.44□□□□□ -0.42
COMMD4-211ENST00000564815 TMEM45BQ96B21 275 aa12.44□□□□□ -0.42
COMMD4-211ENST00000564815 ZG16BQ96DA0 208 aa12.44□□□□□ -0.42
COMMD4-211ENST00000564815 TRNT1Q96Q11 434 aaKnown RBP12.44□□□□□ -0.42
COMMD4-211ENST00000564815 VRK1Q99986 396 aaPredicted RBP12.44□□□□□ -0.42
COMMD4-211ENST00000564815 SLC35A5Q9BS91 424 aa12.44□□□□□ -0.42
COMMD4-211ENST00000564815 TAPBPLQ9BX59 468 aa12.44□□□□□ -0.42
COMMD4-211ENST00000564815 AKTIPQ9H8T0 292 aa12.44□□□□□ -0.42
COMMD4-211ENST00000564815 OSGIN1Q9UJX0 560 aa12.44□□□□□ -0.42
COMMD4-211ENST00000564815 MOKQ9UQ07 419 aa12.44□□□□□ -0.42
COMMD4-211ENST00000564815 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.44□□□□□ -0.42
COMMD4-211ENST00000564815 CFAP73A6NFT4 308 aa12.43□□□□□ -0.42
COMMD4-211ENST00000564815 B9A039 149 aa12.43□□□□□ -0.42
COMMD4-211ENST00000564815 FAAHO00519 579 aa12.43□□□□□ -0.42
COMMD4-211ENST00000564815 SCN2BO60939 215 aa12.43□□□□□ -0.42
COMMD4-211ENST00000564815 VAMP5O95183 116 aa12.43□□□□□ -0.42
COMMD4-211ENST00000564815 ZNF16P17020 682 aaPredicted RBP12.43□□□□□ -0.42
COMMD4-211ENST00000564815 TACR3P29371 465 aa12.43□□□□□ -0.42
COMMD4-211ENST00000564815 NR4A2P43354 598 aa12.43□□□□□ -0.42
COMMD4-211ENST00000564815 FOXG1P55316 489 aaPredicted RBP12.43□□□□□ -0.42
COMMD4-211ENST00000564815 COPZ1P61923 177 aa12.43□□□□□ -0.42
COMMD4-211ENST00000564815 LRRC74AQ0VAA2 488 aa12.43□□□□□ -0.42
COMMD4-211ENST00000564815 SWI5Q1ZZU3 235 aa12.43□□□□□ -0.42
COMMD4-211ENST00000564815 OTUD3Q5T2D3 398 aaPredicted RBP12.43□□□□□ -0.42
COMMD4-211ENST00000564815 LRRC74BQ6ZQY2 392 aa12.43□□□□□ -0.42
COMMD4-211ENST00000564815 SLC46A3Q7Z3Q1 461 aa12.43□□□□□ -0.42
COMMD4-211ENST00000564815 ANKRD46Q86W74 232 aa12.43□□□□□ -0.42
COMMD4-211ENST00000564815 CNOT9Q92600 299 aaKnown RBP12.43□□□□□ -0.42
COMMD4-211ENST00000564815 TESCQ96BS2 214 aa12.43□□□□□ -0.42
COMMD4-211ENST00000564815 AURKBQ96GD4 344 aaPredicted RBP12.43□□□□□ -0.42
COMMD4-211ENST00000564815 RAB1BQ9H0U4 201 aa12.43□□□□□ -0.42
COMMD4-211ENST00000564815 CHODLQ9H9P2 273 aa12.43□□□□□ -0.42
COMMD4-211ENST00000564815 YLPM1P49750 1951 aaKnown RBP12.43□□□□□ -0.42
COMMD4-211ENST00000564815 TMEM72A0PK05 275 aa12.42□□□□□ -0.42
COMMD4-211ENST00000564815 AGAP5A6NIR3 686 aa12.42□□□□□ -0.42
COMMD4-211ENST00000564815 ZNF587BE7ETH6 402 aa12.42□□□□□ -0.42
COMMD4-211ENST00000564815 ATP6V1G2-DDX39BF2Z307 99 aa12.42□□□□□ -0.42
COMMD4-211ENST00000564815 TGFAP01135 160 aa12.42□□□□□ -0.42
COMMD4-211ENST00000564815 DBIP07108 87 aaKnown RBP12.42□□□□□ -0.42
COMMD4-211ENST00000564815 NR2F1P10589 423 aa12.42□□□□□ -0.42
COMMD4-211ENST00000564815 IMPDH2P12268 514 aa12.42□□□□□ -0.42
COMMD4-211ENST00000564815 HOXB1P14653 301 aaPredicted RBP12.42□□□□□ -0.42
COMMD4-211ENST00000564815 CEACAM7Q14002 265 aa12.42□□□□□ -0.42
COMMD4-211ENST00000564815 CASP8Q14790 479 aa12.42□□□□□ -0.42
COMMD4-211ENST00000564815 PDCD2Q16342 344 aaPredicted RBP12.42□□□□□ -0.42
COMMD4-211ENST00000564815 ZSWIM7Q19AV6 140 aa12.42□□□□□ -0.42
COMMD4-211ENST00000564815 KRTAP24-1Q3LI83 254 aa12.42□□□□□ -0.42
COMMD4-211ENST00000564815 FAM120AOSQ5T036 256 aa12.42□□□□□ -0.42
COMMD4-211ENST00000564815 PEX5LQ8IYB4 626 aa12.42□□□□□ -0.42
COMMD4-211ENST00000564815 OR9K2Q8NGE7 335 aa12.42□□□□□ -0.42
COMMD4-211ENST00000564815 WDR60Q8WVS4 1066 aa12.42□□□□□ -0.42
COMMD4-211ENST00000564815 BOD1Q96IK1 185 aa12.42□□□□□ -0.42
COMMD4-211ENST00000564815 PPP1R36Q96LQ0 422 aa12.42□□□□□ -0.42
COMMD4-211ENST00000564815 FOXN4Q96NZ1 517 aa12.42□□□□□ -0.42
COMMD4-211ENST00000564815 ZNF317Q96PQ6 595 aaPredicted RBP12.42□□□□□ -0.42
COMMD4-211ENST00000564815 C19orf24Q9BVV8 132 aa12.42□□□□□ -0.42
COMMD4-211ENST00000564815 CACYBPQ9HB71 228 aaKnown RBP12.42□□□□□ -0.42
COMMD4-211ENST00000564815 LGALS13Q9UHV8 139 aa12.42□□□□□ -0.42
COMMD4-211ENST00000564815 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.42□□□□□ -0.421e-8■■■■□ 24.7
COMMD4-211ENST00000564815 CLDN24A6NM45 220 aa12.41□□□□□ -0.42
COMMD4-211ENST00000564815 VWC2LB2RUY7 222 aa12.41□□□□□ -0.42
COMMD4-211ENST00000564815 HMGN4O00479 90 aa12.41□□□□□ -0.42
COMMD4-211ENST00000564815 KLF11O14901 512 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms