RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 POLR2HP52434 150 aaKnown RBP12.31□□□□□ -0.44
CDR2-204ENST00000564542 MAP2K6P52564 334 aa12.31□□□□□ -0.44
CDR2-204ENST00000564542 MST1LQ2TV78 715 aa12.31□□□□□ -0.44
CDR2-204ENST00000564542 SAXO2Q658L1 398 aa12.31□□□□□ -0.44
CDR2-204ENST00000564542 PAQR6Q6TCH4 344 aa12.31□□□□□ -0.44
CDR2-204ENST00000564542 IL17RELQ6ZVW7 336 aa12.31□□□□□ -0.44
CDR2-204ENST00000564542 HMGN2P46Q86SG4 172 aa12.31□□□□□ -0.44
CDR2-204ENST00000564542 ANKRD46Q86W74 232 aa12.31□□□□□ -0.44
CDR2-204ENST00000564542 CMIPQ8IY22 773 aa12.31□□□□□ -0.44
CDR2-204ENST00000564542 RIBC1Q8N443 379 aaPredicted RBP12.31□□□□□ -0.44
CDR2-204ENST00000564542 TCP10LQ8TDR4 215 aa12.31□□□□□ -0.44
CDR2-204ENST00000564542 PMM1Q92871 262 aa12.31□□□□□ -0.44
CDR2-204ENST00000564542 MSI2Q96DH6 328 aaKnown RBP12.31□□□□□ -0.44
CDR2-204ENST00000564542 NEURL3Q96EH8 262 aa12.31□□□□□ -0.44
CDR2-204ENST00000564542 BOD1Q96IK1 185 aa12.31□□□□□ -0.44
CDR2-204ENST00000564542 ZIM3Q96PE6 472 aa12.31□□□□□ -0.44
CDR2-204ENST00000564542 MYOZ1Q9NP98 299 aaPredicted RBP12.31□□□□□ -0.44
CDR2-204ENST00000564542 OSGIN1Q9UJX0 560 aa12.31□□□□□ -0.44
CDR2-204ENST00000564542 MOKQ9UQ07 419 aa12.31□□□□□ -0.44
CDR2-204ENST00000564542 PRSS51A0A1B0GVH4 220 aa12.3□□□□□ -0.44
CDR2-204ENST00000564542 LOC390937A0A1W2PQ73 354 aa12.3□□□□□ -0.44
CDR2-204ENST00000564542 FAAHO00519 579 aa12.3□□□□□ -0.44
CDR2-204ENST00000564542 SCN2BO60939 215 aa12.3□□□□□ -0.44
CDR2-204ENST00000564542 SPAG7O75391 227 aa12.3□□□□□ -0.44
CDR2-204ENST00000564542 APEHP13798 732 aaKnown RBP12.3□□□□□ -0.44
CDR2-204ENST00000564542 SRSF2Q01130 221 aaKnown RBP12.3□□□□□ -0.44
CDR2-204ENST00000564542 GPAT3Q53EU6 434 aa12.3□□□□□ -0.44
CDR2-204ENST00000564542 HIKESHIQ53FT3 197 aa12.3□□□□□ -0.44
CDR2-204ENST00000564542 ANXA8L1Q5VT79 327 aa12.3□□□□□ -0.44
CDR2-204ENST00000564542 POMGNT2Q8NAT1 580 aa12.3□□□□□ -0.44
CDR2-204ENST00000564542 VPS37AQ8NEZ2 397 aa12.3□□□□□ -0.44
CDR2-204ENST00000564542 CNOT9Q92600 299 aaKnown RBP12.3□□□□□ -0.44
CDR2-204ENST00000564542 SF3B5Q9BWJ5 86 aaKnown RBP12.3□□□□□ -0.44
CDR2-204ENST00000564542 DPY30Q9C005 99 aa12.3□□□□□ -0.44
CDR2-204ENST00000564542 OBP2BQ9NPH6 170 aa12.3□□□□□ -0.44
CDR2-204ENST00000564542 IGHV1-18A0A0C4DH31 117 aa12.29□□□□□ -0.44
CDR2-204ENST00000564542 IGHV4-61A0A0C4DH41 118 aa12.29□□□□□ -0.44
CDR2-204ENST00000564542 TLDC2A0PJX2 215 aa12.29□□□□□ -0.44
CDR2-204ENST00000564542 ZC3H12DA2A288 527 aaKnown RBP12.29□□□□□ -0.44
CDR2-204ENST00000564542 PRAMEF27A3QJZ7 478 aa12.29□□□□□ -0.44
CDR2-204ENST00000564542 BPGMP07738 259 aa12.29□□□□□ -0.44
CDR2-204ENST00000564542 UQCRBP14927 111 aa12.29□□□□□ -0.44
CDR2-204ENST00000564542 TACR3P29371 465 aa12.29□□□□□ -0.44
CDR2-204ENST00000564542 CHI3L1P36222 383 aaPredicted RBP12.29□□□□□ -0.44
CDR2-204ENST00000564542 SERPINF1P36955 418 aa12.29□□□□□ -0.44
CDR2-204ENST00000564542 SLC1A3P43003 542 aa12.29□□□□□ -0.44
CDR2-204ENST00000564542 OTUD3Q5T2D3 398 aaPredicted RBP12.29□□□□□ -0.44
CDR2-204ENST00000564542 AAED1Q7RTV5 226 aa12.29□□□□□ -0.44
CDR2-204ENST00000564542 SLC46A3Q7Z3Q1 461 aa12.29□□□□□ -0.44
CDR2-204ENST00000564542 ABHD12BQ7Z5M8 362 aaPredicted RBP12.29□□□□□ -0.44
CDR2-204ENST00000564542 ZIC4Q8N9L1 334 aa12.29□□□□□ -0.44
CDR2-204ENST00000564542 OR9K2Q8NGE7 335 aa12.29□□□□□ -0.44
CDR2-204ENST00000564542 TESCQ96BS2 214 aa12.29□□□□□ -0.44
CDR2-204ENST00000564542 C3orf49Q96BT1 292 aa12.29□□□□□ -0.44
CDR2-204ENST00000564542 TRNT1Q96Q11 434 aaKnown RBP12.29□□□□□ -0.44
CDR2-204ENST00000564542 SLC35A5Q9BS91 424 aa12.29□□□□□ -0.44
CDR2-204ENST00000564542 KATNB1Q9BVA0 655 aa12.29□□□□□ -0.44
CDR2-204ENST00000564542 PIF1Q9H611 641 aa12.29□□□□□ -0.44
CDR2-204ENST00000564542 CA10Q9NS85 328 aa12.29□□□□□ -0.44
CDR2-204ENST00000564542 MARCOQ9UEW3 520 aaPredicted RBP12.29□□□□□ -0.44
CDR2-204ENST00000564542 LGALS13Q9UHV8 139 aa12.29□□□□□ -0.44
CDR2-204ENST00000564542 AGAP5A6NIR3 686 aa12.28□□□□□ -0.44
CDR2-204ENST00000564542 B9A039 149 aa12.28□□□□□ -0.44
CDR2-204ENST00000564542 HMGN4O00479 90 aa12.28□□□□□ -0.44
CDR2-204ENST00000564542 KLF11O14901 512 aa12.28□□□□□ -0.44
CDR2-204ENST00000564542 PDE5AO76074 875 aa12.28□□□□□ -0.44
CDR2-204ENST00000564542 CPSF4O95639 269 aaKnown RBP12.28□□□□□ -0.44
CDR2-204ENST00000564542 GPIP06744 558 aa12.28□□□□□ -0.44
CDR2-204ENST00000564542 ZNF23P17027 643 aa12.28□□□□□ -0.44
CDR2-204ENST00000564542 CDH2P19022 906 aaPredicted RBP12.28□□□□□ -0.44
CDR2-204ENST00000564542 RPS4Y1P22090 263 aaKnown RBP12.28□□□□□ -0.44
CDR2-204ENST00000564542 PAX7P23759 505 aa12.28□□□□□ -0.44
CDR2-204ENST00000564542 SQLEQ14534 574 aa12.28□□□□□ -0.44
CDR2-204ENST00000564542 CASP8Q14790 479 aa12.28□□□□□ -0.44
CDR2-204ENST00000564542 PDCD2Q16342 344 aaPredicted RBP12.28□□□□□ -0.44
CDR2-204ENST00000564542 CARTPTQ16568 116 aa12.28□□□□□ -0.44
CDR2-204ENST00000564542 DPY19L1Q2PZI1 675 aa12.28□□□□□ -0.44
CDR2-204ENST00000564542 LSRQ86X29 649 aaPredicted RBP12.28□□□□□ -0.44
CDR2-204ENST00000564542 ZNF540Q8NDQ6 660 aa12.28□□□□□ -0.44
CDR2-204ENST00000564542 WDR60Q8WVS4 1066 aa12.28□□□□□ -0.44
CDR2-204ENST00000564542 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.28□□□□□ -0.44
CDR2-204ENST00000564542 PPP1R36Q96LQ0 422 aa12.28□□□□□ -0.44
CDR2-204ENST00000564542 FOXN4Q96NZ1 517 aa12.28□□□□□ -0.44
CDR2-204ENST00000564542 ZNF385AQ96PM9 386 aaKnown RBP12.28□□□□□ -0.44
CDR2-204ENST00000564542 SLC38A2Q96QD8 506 aa12.28□□□□□ -0.44
CDR2-204ENST00000564542 VRK1Q99986 396 aaPredicted RBP12.28□□□□□ -0.44
CDR2-204ENST00000564542 KCNS3Q9BQ31 491 aa12.28□□□□□ -0.44
CDR2-204ENST00000564542 SLC38A1Q9H2H9 487 aa12.28□□□□□ -0.44
CDR2-204ENST00000564542 AKTIPQ9H8T0 292 aa12.28□□□□□ -0.44
CDR2-204ENST00000564542 CFAP73A6NFT4 308 aa12.27□□□□□ -0.45
CDR2-204ENST00000564542 LIPT2A6NK58 231 aa12.27□□□□□ -0.45
CDR2-204ENST00000564542 AQP7P3A6NL99 342 aa12.27□□□□□ -0.45
CDR2-204ENST00000564542 AKR7A3O95154 331 aa12.27□□□□□ -0.45
CDR2-204ENST00000564542 TGFAP01135 160 aa12.27□□□□□ -0.45
CDR2-204ENST00000564542 CRYAAP02489 173 aa12.27□□□□□ -0.45
CDR2-204ENST00000564542 CHRM4P08173 479 aa12.27□□□□□ -0.45
CDR2-204ENST00000564542 PPOXP50336 477 aa12.27□□□□□ -0.45
CDR2-204ENST00000564542 CLNS1AP54105 237 aaKnown RBP12.27□□□□□ -0.45
CDR2-204ENST00000564542 TXNL4AP83876 142 aaKnown RBP12.27□□□□□ -0.45
CDR2-204ENST00000564542 EPS8Q12929 822 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms