RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 WDR74Q6RFH5 385 aaPredicted RBP1.95□□□□□ -2.1
CHD9-209ENST00000564255 SLC25A48Q6ZT89 311 aaKnown RBP1.95□□□□□ -2.1
CHD9-209ENST00000564255 UTS2BQ765I0 119 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 OR1L6Q8NGR2 347 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 BRSK1Q8TDC3 778 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 PLEKHA8Q96JA3 519 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 NOL4LQ96MY1 436 aaPredicted RBP1.95□□□□□ -2.1
CHD9-209ENST00000564255 MAPKAP1Q9BPZ7 522 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 ANKRA2Q9H9E1 313 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 DDX18Q9NVP1 670 aaKnown RBP1.95□□□□□ -2.1
CHD9-209ENST00000564255 KLHL28Q9NXS3 571 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 PAK5Q9P286 719 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 DCDC2Q9UHG0 476 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 WDR19Q8NEZ3 1342 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 SH3TC1Q8TE82 1336 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 A0A087WWV3 80 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 CCDC182A6NF36 153 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 DCTN6O00399 190 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 ABCD4O14678 606 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 CASC3O15234 703 aaKnown RBP1.95□□□□□ -2.1
CHD9-209ENST00000564255 LGI1O95970 557 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 TROVE2P10155 538 aaKnown RBP eCLIP1.95□□□□□ -2.1
CHD9-209ENST00000564255 HOXD10P28358 340 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 CALCRP30988 508 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 GCKP35557 465 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 PLK1P53350 603 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 RPS15P62841 145 aaKnown RBP1.95□□□□□ -2.1
CHD9-209ENST00000564255 SCRN3Q0VDG4 424 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 OR5I1Q13606 314 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 GNMTQ14749 295 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 PPP1R7Q15435 360 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 QRICH1Q2TAL8 776 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 TIMM50Q3ZCQ8 353 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 SLC22A6Q4U2R8 563 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 C11orf71Q6IPW1 123 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 ACOT7LQ6ZUV0 252 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 GDPD3Q7L5L3 318 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 BHLHA9Q7RTU4 235 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 MARCH9Q86YJ5 346 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 HPS6Q86YV9 775 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 CEP112Q8N8E3 955 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 OR4F6Q8NGB9 312 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 AGR3Q8TD06 166 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 CHCHD10Q8WYQ3 142 aaPredicted RBP1.95□□□□□ -2.1
CHD9-209ENST00000564255 UFD1Q92890 307 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 MS4A14Q96JA4 679 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 ZNF641Q96N77 438 aaPredicted RBP1.95□□□□□ -2.1
CHD9-209ENST00000564255 PPA2Q9H2U2 334 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 TMCO1Q9UM00 188 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 STARD10Q9Y365 291 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 CSAG2Q9Y5P2 127 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 GPR98Q8WXG9 6306 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 TTC41PQ6P2S7 1318 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 CNTNAP2Q9UHC6 1331 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 PLEKHH1Q9ULM0 1364 aa1.95□□□□□ -2.1
CHD9-209ENST00000564255 IGLV8-61A0A075B6I0 122 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 IGHV1OR15-1A0A075B7D0 117 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 A0A1W2PQ72 361 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 TBX6O95947 436 aaPredicted RBP1.94□□□□□ -2.1
CHD9-209ENST00000564255 FASP25445 335 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 IL12AP29459 219 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 HNRNPH3P31942 346 aaKnown RBP1.94□□□□□ -2.1
CHD9-209ENST00000564255 RFC4P35249 363 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 CDH6P55285 790 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 HIGD2BQ4VC39 106 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 LRRC74BQ6ZQY2 392 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 PRSS41Q7RTY9 318 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 SCD5Q86SK9 330 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 PPP1R27Q86WC6 154 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 MFSD6LQ8IWD5 586 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 GTPBP8Q8N3Z3 284 aaPredicted RBP1.94□□□□□ -2.1
CHD9-209ENST00000564255 TPRX1Q8N7U7 411 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 OR13F1Q8NGS4 319 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 GTSF1Q8WW33 167 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 VSIG2Q96IQ7 327 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 PGLYRP4Q96LB8 373 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 PANX1Q96RD7 426 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 ATOH8Q96SQ7 321 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 MBOAT4Q96T53 435 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 ZNF184Q99676 751 aaPredicted RBP1.94□□□□□ -2.1
CHD9-209ENST00000564255 PAXXQ9BUH6 204 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 FAIM2Q9BWQ8 316 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 RACGAP1Q9H0H5 632 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 TMEM185BQ9H7F4 350 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 BFARQ9NZS9 450 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 APOBEC3BQ9UH17 382 aaKnown RBP1.94□□□□□ -2.1
CHD9-209ENST00000564255 COPS3Q9UNS2 423 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 CACNA1FO60840 1977 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 IGKV3D-15A0A087WSY6 115 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 A0A0G2JRQ6 117 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 GOLGA6L7A0A1B0GV03 622 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 CASQ2O14958 399 aaPredicted RBP1.94□□□□□ -2.1
CHD9-209ENST00000564255 C1orf105O95561 183 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 OXSR1O95747 527 aaPredicted RBP1.94□□□□□ -2.1
CHD9-209ENST00000564255 IGHV3-23P01764 117 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 MMP1P03956 469 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 GIG44P09565 113 aaPredicted RBP1.94□□□□□ -2.1
CHD9-209ENST00000564255 CAPN2P17655 700 aa1.94□□□□□ -2.1
CHD9-209ENST00000564255 OTX1P32242 354 aaPredicted RBP1.94□□□□□ -2.1
CHD9-209ENST00000564255 PEX19P40855 299 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms