RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 SLC16A1P53985 500 aa11.9□□□□□ -0.5
CLK3-213ENST00000563842 PCBP3P57721 371 aaKnown RBP11.9□□□□□ -0.5
CLK3-213ENST00000563842 H3F3AP84243 136 aa11.9□□□□□ -0.5
CLK3-213ENST00000563842 SELPLGQ14242 412 aa11.9□□□□□ -0.5
CLK3-213ENST00000563842 P2RY6Q15077 328 aa11.9□□□□□ -0.5
CLK3-213ENST00000563842 ELOA3BQ3SY89 546 aa11.9□□□□□ -0.5
CLK3-213ENST00000563842 PRR14LQ5THK1 2151 aa11.9□□□□□ -0.5
CLK3-213ENST00000563842 FAM91A1Q658Y4 838 aa11.9□□□□□ -0.5
CLK3-213ENST00000563842 ERICH5Q6P6B1 374 aa11.9□□□□□ -0.5
CLK3-213ENST00000563842 PAQR6Q6TCH4 344 aa11.9□□□□□ -0.5
CLK3-213ENST00000563842 STAC2Q6ZMT1 411 aa11.9□□□□□ -0.5
CLK3-213ENST00000563842 ATG4DQ86TL0 474 aaPredicted RBP11.9□□□□□ -0.5
CLK3-213ENST00000563842 RANBP3LQ86VV4 465 aaPredicted RBP11.9□□□□□ -0.5
CLK3-213ENST00000563842 ZNF100Q8IYN0 542 aa11.9□□□□□ -0.5
CLK3-213ENST00000563842 ELOA3Q8NG57 546 aa11.9□□□□□ -0.5
CLK3-213ENST00000563842 OR52E4Q8NGH9 312 aa11.9□□□□□ -0.5
CLK3-213ENST00000563842 TMEM27Q9HBJ8 222 aa11.9□□□□□ -0.5
CLK3-213ENST00000563842 PARPBPQ9NWS1 579 aa11.9□□□□□ -0.5
CLK3-213ENST00000563842 ING1Q9UK53 422 aaPredicted RBP11.9□□□□□ -0.5
CLK3-213ENST00000563842 NOSIPQ9Y314 301 aaKnown RBP11.9□□□□□ -0.5
CLK3-213ENST00000563842 HEATR1Q9H583 2144 aaKnown RBP11.9□□□□□ -0.5
CLK3-213ENST00000563842 ZC3H12DA2A288 527 aaKnown RBP11.89□□□□□ -0.51
CLK3-213ENST00000563842 M0QX08 132 aa11.89□□□□□ -0.51
CLK3-213ENST00000563842 FRS3O43559 492 aa11.89□□□□□ -0.51
CLK3-213ENST00000563842 OR2T1O43869 369 aa11.89□□□□□ -0.51
CLK3-213ENST00000563842 VAMP5O95183 116 aa11.89□□□□□ -0.51
CLK3-213ENST00000563842 AHSA1O95433 338 aa11.89□□□□□ -0.51
CLK3-213ENST00000563842 IMPDH2P12268 514 aa11.89□□□□□ -0.51
CLK3-213ENST00000563842 CRYGSP22914 178 aa11.89□□□□□ -0.51
CLK3-213ENST00000563842 IL32P24001 234 aa11.89□□□□□ -0.51
CLK3-213ENST00000563842 CEACAM7Q14002 265 aa11.89□□□□□ -0.51
CLK3-213ENST00000563842 VMACQ2NL98 169 aa11.89□□□□□ -0.51
CLK3-213ENST00000563842 C1orf140Q5VVS0 124 aa11.89□□□□□ -0.51
CLK3-213ENST00000563842 ULK3Q6PHR2 472 aa11.89□□□□□ -0.51
CLK3-213ENST00000563842 C6orf89Q6UWU4 347 aa11.89□□□□□ -0.51
CLK3-213ENST00000563842 Q6ZT83 130 aa11.89□□□□□ -0.51
CLK3-213ENST00000563842 SPATA21Q7Z572 469 aa11.89□□□□□ -0.51
CLK3-213ENST00000563842 ARPINQ7Z6K5 226 aa11.89□□□□□ -0.51
CLK3-213ENST00000563842 CDC20BQ86Y33 519 aa11.89□□□□□ -0.51
CLK3-213ENST00000563842 GABRG1Q8N1C3 465 aa11.89□□□□□ -0.51
CLK3-213ENST00000563842 NINJ1Q92982 152 aa11.89□□□□□ -0.51
CLK3-213ENST00000563842 DNAJA3Q96EY1 480 aa11.89□□□□□ -0.51
CLK3-213ENST00000563842 SLC47A1Q96FL8 570 aa11.89□□□□□ -0.51
CLK3-213ENST00000563842 ZNF300Q96RE9 604 aaPredicted RBP11.89□□□□□ -0.51
CLK3-213ENST00000563842 ELAC2Q9BQ52 826 aaKnown RBP11.89□□□□□ -0.51
CLK3-213ENST00000563842 SF3B5Q9BWJ5 86 aaKnown RBP11.89□□□□□ -0.51
CLK3-213ENST00000563842 PIF1Q9H611 641 aa11.89□□□□□ -0.51
CLK3-213ENST00000563842 SLC9A8Q9Y2E8 581 aa11.89□□□□□ -0.51
CLK3-213ENST00000563842 DSCAMO60469 2012 aa11.88□□□□□ -0.51
CLK3-213ENST00000563842 LIPT2A6NK58 231 aa11.88□□□□□ -0.51
CLK3-213ENST00000563842 ZNF716A6NP11 495 aa11.88□□□□□ -0.51
CLK3-213ENST00000563842 TMEM229AB2RXF0 380 aa11.88□□□□□ -0.51
CLK3-213ENST00000563842 TPST1O60507 370 aa11.88□□□□□ -0.51
CLK3-213ENST00000563842 FMO6PO60774 539 aa11.88□□□□□ -0.51
CLK3-213ENST00000563842 MRPL33O75394 65 aaKnown RBP11.88□□□□□ -0.51
CLK3-213ENST00000563842 LGI1O95970 557 aa11.88□□□□□ -0.51
CLK3-213ENST00000563842 IFNA14P01570 189 aa11.88□□□□□ -0.51
CLK3-213ENST00000563842 HRGP04196 525 aa11.88□□□□□ -0.51
CLK3-213ENST00000563842 GTF2E2P29084 291 aaKnown RBP11.88□□□□□ -0.51
CLK3-213ENST00000563842 CCKARP32238 428 aa11.88□□□□□ -0.51
CLK3-213ENST00000563842 HOXC5Q00444 222 aa11.88□□□□□ -0.51
CLK3-213ENST00000563842 DMTNQ08495 405 aa11.88□□□□□ -0.51
CLK3-213ENST00000563842 BNIP2Q12982 314 aa11.88□□□□□ -0.51
CLK3-213ENST00000563842 ITGADQ13349 1161 aa11.88□□□□□ -0.51
CLK3-213ENST00000563842 VEZF1Q14119 521 aa11.88□□□□□ -0.51
CLK3-213ENST00000563842 OR7A5Q15622 319 aa11.88□□□□□ -0.51
CLK3-213ENST00000563842 GLIPR1L2Q4G1C9 344 aa11.88□□□□□ -0.51
CLK3-213ENST00000563842 RABL3Q5HYI8 236 aa11.88□□□□□ -0.51
CLK3-213ENST00000563842 ALG10BQ5I7T1 473 aa11.88□□□□□ -0.51
CLK3-213ENST00000563842 OTUD3Q5T2D3 398 aaPredicted RBP11.88□□□□□ -0.51
CLK3-213ENST00000563842 SFRP5Q5T4F7 317 aa11.88□□□□□ -0.51
CLK3-213ENST00000563842 ANKRD34AQ69YU3 496 aa11.88□□□□□ -0.51
CLK3-213ENST00000563842 TMEM225Q6GV28 225 aa11.88□□□□□ -0.51
CLK3-213ENST00000563842 CCDC80Q76M96 950 aa11.88□□□□□ -0.51
CLK3-213ENST00000563842 SSX8Q7RTT4 187 aa11.88□□□□□ -0.51
CLK3-213ENST00000563842 CPLX4Q7Z7G2 160 aa11.88□□□□□ -0.51
CLK3-213ENST00000563842 CXorf67Q86X51 503 aaPredicted RBP11.88□□□□□ -0.51
CLK3-213ENST00000563842 CCDC103Q8IW40 242 aa11.88□□□□□ -0.51
CLK3-213ENST00000563842 MFSD8Q8NHS3 518 aa11.88□□□□□ -0.51
CLK3-213ENST00000563842 KISS1RQ969F8 398 aaPredicted RBP11.88□□□□□ -0.51
CLK3-213ENST00000563842 SLC38A4Q969I6 547 aa11.88□□□□□ -0.51
CLK3-213ENST00000563842 APH1AQ96BI3 265 aa11.88□□□□□ -0.51
CLK3-213ENST00000563842 ZNF775Q96BV0 537 aaPredicted RBP11.88□□□□□ -0.51
CLK3-213ENST00000563842 ACTR6Q9GZN1 396 aa11.88□□□□□ -0.51
CLK3-213ENST00000563842 NGBQ9NPG2 151 aa11.88□□□□□ -0.51
CLK3-213ENST00000563842 ARMCX1Q9P291 453 aa11.88□□□□□ -0.51
CLK3-213ENST00000563842 A0A1B0GWA3 101 aa11.87□□□□□ -0.51
CLK3-213ENST00000563842 GMNCA6NCL1 334 aa11.87□□□□□ -0.51
CLK3-213ENST00000563842 AQP7P3A6NL99 342 aa11.87□□□□□ -0.51
CLK3-213ENST00000563842 FXYD1O00168 92 aa11.87□□□□□ -0.51
CLK3-213ENST00000563842 DYNC1I1O14576 645 aa11.87□□□□□ -0.51
CLK3-213ENST00000563842 NPIPB7O75200 414 aa11.87□□□□□ -0.51
CLK3-213ENST00000563842 GCM2O75603 506 aaPredicted RBP11.87□□□□□ -0.51
CLK3-213ENST00000563842 ADAP00813 363 aa11.87□□□□□ -0.51
CLK3-213ENST00000563842 COX4I1P13073 169 aa11.87□□□□□ -0.51
CLK3-213ENST00000563842 KLK2P20151 261 aa11.87□□□□□ -0.51
CLK3-213ENST00000563842 LSP1P33241 339 aa11.87□□□□□ -0.51
CLK3-213ENST00000563842 GZMMP51124 257 aa11.87□□□□□ -0.51
CLK3-213ENST00000563842 SLC17A1Q14916 467 aa11.87□□□□□ -0.51
CLK3-213ENST00000563842 MFSD13AQ14CX5 517 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms