RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 SPIN1Q9Y657 262 aaPredicted RBP7.61□□□□□ -1.19
UBR1-204ENST00000563239 LIPT2A6NK58 231 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 A8MVM7 634 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 FTCDNL1E5RQL4 147 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 DNPH1O43598 174 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 FMO6PO60774 539 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 FZD7O75084 574 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 DCTN3O75935 186 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 YES1P07947 543 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 T-ENOLP0DO92 83 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 COX6B1P14854 86 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 TNFRSF1BP20333 461 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 FPR1P21462 350 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 UQCRC1P31930 480 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 P2RY4P51582 365 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 CDH12P55289 794 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 RGS8P57771 180 aaPredicted RBP7.6□□□□□ -1.19
UBR1-204ENST00000563239 OR2B6P58173 313 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 CSNK2A1P68400 391 aaPredicted RBP7.6□□□□□ -1.19
UBR1-204ENST00000563239 FAM27E3Q08E93 113 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 CEACAM7Q14002 265 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 KRT72Q14CN4 511 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 PDK3Q15120 406 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 RNPS1Q15287 305 aaKnown RBP7.6□□□□□ -1.19
UBR1-204ENST00000563239 CYBRD1Q53TN4 286 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 GKAP1Q5VSY0 366 aaPredicted RBP7.6□□□□□ -1.19
UBR1-204ENST00000563239 C1orf140Q5VVS0 124 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 LINC00114Q6XXX2 140 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 WDR88Q6ZMY6 472 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 SLC43A2Q8N370 569 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 OR6K3Q8NGY3 331 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 STK35Q8TDR2 534 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 SLC38A4Q969I6 547 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 DDIT4LQ96D03 193 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 KTI12Q96EK9 354 aaPredicted RBP7.6□□□□□ -1.19
UBR1-204ENST00000563239 ZNF300Q96RE9 604 aaPredicted RBP7.6□□□□□ -1.19
UBR1-204ENST00000563239 MCHR1Q99705 422 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 RBM24Q9BX46 236 aaKnown RBP7.6□□□□□ -1.19
UBR1-204ENST00000563239 PCDHAC1Q9H158 963 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 ALG2Q9H553 416 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 EVA1AQ9H8M9 152 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 BCO1Q9HAY6 547 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 GP6Q9HCN6 339 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 KLHL13Q9P2N7 655 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 TESQ9UGI8 421 aaKnown RBP7.6□□□□□ -1.19
UBR1-204ENST00000563239 TAGLN3Q9UI15 199 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 AP3M1Q9Y2T2 418 aa7.6□□□□□ -1.19
UBR1-204ENST00000563239 CSMD2Q7Z408 3487 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 ANKHD1Q8IWZ3 2542 aaKnown RBP7.59□□□□□ -1.19
UBR1-204ENST00000563239 PKDREJQ9NTG1 2253 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 IGKV3D-15A0A087WSY6 115 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 A0A087WUJ7 227 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 ZNF724A8MTY0 619 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 CXCR6O00574 342 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 SMNDC1O75940 238 aaKnown RBP eCLIP7.59□□□□□ -1.19
UBR1-204ENST00000563239 PLGP00747 810 aaPredicted RBP7.59□□□□□ -1.19
UBR1-204ENST00000563239 FUT4P22083 530 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 CCKARP32238 428 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 IDUAP35475 653 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 CPOXP36551 454 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 PCYT1AP49585 367 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 SLC16A1P53985 500 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 CTBP2P56545 445 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 SLC35A1P78382 337 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 SLC25A3Q00325 362 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 LTBQ06643 244 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 RASGEF1BQ0VAM2 473 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 FXNQ16595 210 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 ALG10BQ5I7T1 473 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 ENTPD8Q5MY95 495 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 GTF2IRD2BQ6EKJ0 949 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 ULK3Q6PHR2 472 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 TFAP2EQ6VUC0 442 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 C22orf34Q6ZV56 151 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 GTF2IRD2Q86UP8 949 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 CARM1Q86X55 608 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 P3H2Q8IVL5 708 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 MCEMP1Q8IX19 187 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 TMEM99Q8N816 258 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 ZIC4Q8N9L1 334 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 CCDC197Q8NCU1 140 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 VANGL1Q8TAA9 524 aaPredicted RBP7.59□□□□□ -1.19
UBR1-204ENST00000563239 DNAJA4Q8WW22 397 aaPredicted RBP7.59□□□□□ -1.19
UBR1-204ENST00000563239 TAAR8Q969N4 342 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 ZNF775Q96BV0 537 aaPredicted RBP7.59□□□□□ -1.19
UBR1-204ENST00000563239 TMEM27Q9HBJ8 222 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 KLHL28Q9NXS3 571 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 CRIM1Q9NZV1 1036 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 CD300AQ9UGN4 299 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 FOXD3Q9UJU5 478 aaPredicted RBP7.59□□□□□ -1.19
UBR1-204ENST00000563239 SLC13A4Q9UKG4 626 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 PROCRQ9UNN8 238 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 EMC9Q9Y3B6 208 aa7.59□□□□□ -1.19
UBR1-204ENST00000563239 CSMD1Q96PZ7 3565 aa7.58□□□□□ -1.2
UBR1-204ENST00000563239 AQP7P3A6NL99 342 aa7.58□□□□□ -1.2
UBR1-204ENST00000563239 ELOA3DA6NLF2 546 aaPredicted RBP7.58□□□□□ -1.2
UBR1-204ENST00000563239 CPSF4LA6NMK7 179 aaKnown RBP7.58□□□□□ -1.2
UBR1-204ENST00000563239 EIF1BO60739 113 aaKnown RBP7.58□□□□□ -1.2
UBR1-204ENST00000563239 AKR7A3O95154 331 aa7.58□□□□□ -1.2
UBR1-204ENST00000563239 GPIP06744 558 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms