RNA–Protein interactions for RNA: ENST00000563112.1

CLK3-210, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 665 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-210ENST00000563112 TAPBPLQ9BX59 468 aa14.89□□□□□ -0.03
CLK3-210ENST00000563112 RABEP2Q9H5N1 569 aa14.89□□□□□ -0.03
CLK3-210ENST00000563112 CXorf56Q9H5V9 222 aa14.89□□□□□ -0.03
CLK3-210ENST00000563112 ASB6Q9NWX5 421 aa14.89□□□□□ -0.03
CLK3-210ENST00000563112 SLC9A8Q9Y2E8 581 aa14.89□□□□□ -0.03
CLK3-210ENST00000563112 RAI1Q7Z5J4 1906 aaPredicted RBP14.89□□□□□ -0.03
CLK3-210ENST00000563112 ZC3H12DA2A288 527 aaKnown RBP14.88□□□□□ -0.03
CLK3-210ENST00000563112 CCT8L1PA6NM43 557 aa14.88□□□□□ -0.03
CLK3-210ENST00000563112 A8MVM7 634 aa14.88□□□□□ -0.03
CLK3-210ENST00000563112 EVPLLA8MZ36 301 aa14.88□□□□□ -0.03
CLK3-210ENST00000563112 IGHV3-9P01782 118 aa14.88□□□□□ -0.03
CLK3-210ENST00000563112 COX5AP20674 150 aa14.88□□□□□ -0.03
CLK3-210ENST00000563112 EDNRAP25101 427 aa14.88□□□□□ -0.03
CLK3-210ENST00000563112 CEACAM7Q14002 265 aa14.88□□□□□ -0.03
CLK3-210ENST00000563112 OTUD3Q5T2D3 398 aaPredicted RBP14.88□□□□□ -0.03
CLK3-210ENST00000563112 GCNT6Q5T4J0 391 aa14.88□□□□□ -0.03
CLK3-210ENST00000563112 ADAM5Q6NVV9 412 aa14.88□□□□□ -0.03
CLK3-210ENST00000563112 CASP12Q6UXS9 341 aa14.88□□□□□ -0.03
CLK3-210ENST00000563112 BIVMQ86UB2 503 aa14.88□□□□□ -0.03
CLK3-210ENST00000563112 ZNF433Q8N7K0 673 aaPredicted RBP14.88□□□□□ -0.03
CLK3-210ENST00000563112 CKAP2Q8WWK9 683 aa14.88□□□□□ -0.03
CLK3-210ENST00000563112 MAL2Q969L2 176 aa14.88□□□□□ -0.03
CLK3-210ENST00000563112 SLC35B4Q969S0 331 aa14.88□□□□□ -0.03
CLK3-210ENST00000563112 MAGEB18Q96M61 343 aa14.88□□□□□ -0.03
CLK3-210ENST00000563112 GSX2Q9BZM3 304 aa14.88□□□□□ -0.03
CLK3-210ENST00000563112 UPB1Q9UBR1 384 aa14.88□□□□□ -0.03
CLK3-210ENST00000563112 CORO2BQ9UQ03 480 aa14.88□□□□□ -0.03
CLK3-210ENST00000563112 ZFHX3Q15911 3703 aa14.88□□□□□ -0.03
CLK3-210ENST00000563112 RAMP1O60894 148 aa14.87□□□□□ -0.03
CLK3-210ENST00000563112 PGM3O95394 542 aa14.87□□□□□ -0.03
CLK3-210ENST00000563112 ETS2P15036 469 aa14.87□□□□□ -0.03
CLK3-210ENST00000563112 HOXB9P17482 250 aaPredicted RBP14.87□□□□□ -0.03
CLK3-210ENST00000563112 ADSLP30566 484 aaPredicted RBP14.87□□□□□ -0.03
CLK3-210ENST00000563112 PTH2RP49190 550 aa14.87□□□□□ -0.03
CLK3-210ENST00000563112 FAPQ12884 760 aa14.87□□□□□ -0.03
CLK3-210ENST00000563112 OR7A5Q15622 319 aa14.87□□□□□ -0.03
CLK3-210ENST00000563112 YTHDF3Q7Z739 585 aaKnown RBP14.87□□□□□ -0.03
CLK3-210ENST00000563112 SERPINA11Q86U17 422 aa14.87□□□□□ -0.03
CLK3-210ENST00000563112 KRT73Q86Y46 540 aa14.87□□□□□ -0.03
CLK3-210ENST00000563112 KRTAP1-3Q8IUG1 177 aa14.87□□□□□ -0.03
CLK3-210ENST00000563112 FBXW5Q969U6 566 aa14.87□□□□□ -0.03
CLK3-210ENST00000563112 SPATA5L1Q9BVQ7 753 aa14.87□□□□□ -0.03
CLK3-210ENST00000563112 SLC25A37Q9NYZ2 338 aa14.87□□□□□ -0.03
CLK3-210ENST00000563112 RPS6KB2Q9UBS0 482 aa14.87□□□□□ -0.03
CLK3-210ENST00000563112 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.87□□□□□ -0.03
CLK3-210ENST00000563112 FLVCR1Q9Y5Y0 555 aa14.87□□□□□ -0.03
CLK3-210ENST00000563112 VPS13CQ709C8 3753 aa14.86□□□□□ -0.03
CLK3-210ENST00000563112 A0A1W2PP18 115 aa14.86□□□□□ -0.03
CLK3-210ENST00000563112 LIPT2A6NK58 231 aa14.86□□□□□ -0.03
CLK3-210ENST00000563112 OR5H1A6NKK0 313 aa14.86□□□□□ -0.03
CLK3-210ENST00000563112 RAD51DO75771 328 aa14.86□□□□□ -0.03
CLK3-210ENST00000563112 INHBBP09529 407 aa14.86□□□□□ -0.03
CLK3-210ENST00000563112 PRG2P13727 222 aa14.86□□□□□ -0.03
CLK3-210ENST00000563112 BSPH1Q075Z2 132 aa14.86□□□□□ -0.03
CLK3-210ENST00000563112 BNIP2Q12982 314 aa14.86□□□□□ -0.03
CLK3-210ENST00000563112 SLC17A1Q14916 467 aa14.86□□□□□ -0.03
CLK3-210ENST00000563112 PAGE3Q5JUK9 113 aa14.86□□□□□ -0.03
CLK3-210ENST00000563112 TMEM225Q6GV28 225 aa14.86□□□□□ -0.03
CLK3-210ENST00000563112 OR7E24Q6IFN5 339 aa14.86□□□□□ -0.03
CLK3-210ENST00000563112 REEP3Q6NUK4 255 aa14.86□□□□□ -0.03
CLK3-210ENST00000563112 TMEM99Q8N816 258 aa14.86□□□□□ -0.03
CLK3-210ENST00000563112 NFKBIDQ8NI38 313 aa14.86□□□□□ -0.03
CLK3-210ENST00000563112 STON2Q8WXE9 905 aa14.86□□□□□ -0.03
CLK3-210ENST00000563112 C3orf49Q96BT1 292 aa14.86□□□□□ -0.03
CLK3-210ENST00000563112 BDH2Q9BUT1 245 aa14.86□□□□□ -0.03
CLK3-210ENST00000563112 SF3B5Q9BWJ5 86 aaKnown RBP14.86□□□□□ -0.03
CLK3-210ENST00000563112 GSX1Q9H4S2 264 aaPredicted RBP14.86□□□□□ -0.03
CLK3-210ENST00000563112 PIF1Q9H611 641 aa14.86□□□□□ -0.03
CLK3-210ENST00000563112 TAS2R16Q9NYV7 291 aa14.86□□□□□ -0.03
CLK3-210ENST00000563112 SLAMF8Q9P0V8 285 aa14.86□□□□□ -0.03
CLK3-210ENST00000563112 MALT1Q9UDY8 824 aa14.86□□□□□ -0.03
CLK3-210ENST00000563112 TRIM33Q9UPN9 1127 aa14.86□□□□□ -0.03
CLK3-210ENST00000563112 LAMP3Q9UQV4 416 aa14.86□□□□□ -0.03
CLK3-210ENST00000563112 CHST2Q9Y4C5 530 aa14.86□□□□□ -0.03
CLK3-210ENST00000563112 CADP27708 2225 aa14.86□□□□□ -0.03
CLK3-210ENST00000563112 ZNF469Q96JG9 3925 aaPredicted RBP14.86□□□□□ -0.03
CLK3-210ENST00000563112 USF3Q68DE3 2245 aa14.85□□□□□ -0.03
CLK3-210ENST00000563112 DPRXA6NFQ7 191 aa14.85□□□□□ -0.03
CLK3-210ENST00000563112 AQP7P3A6NL99 342 aa14.85□□□□□ -0.03
CLK3-210ENST00000563112 FAM171A2A8MVW0 826 aa14.85□□□□□ -0.03
CLK3-210ENST00000563112 AKR7A3O95154 331 aa14.85□□□□□ -0.03
CLK3-210ENST00000563112 VAMP5O95183 116 aa14.85□□□□□ -0.03
CLK3-210ENST00000563112 AHSA1O95433 338 aa14.85□□□□□ -0.03
CLK3-210ENST00000563112 ARAFP10398 606 aa14.85□□□□□ -0.03
CLK3-210ENST00000563112 PAX1P15863 534 aa14.85□□□□□ -0.03
CLK3-210ENST00000563112 PRKAR1BP31321 381 aa14.85□□□□□ -0.03
CLK3-210ENST00000563112 NTF4P34130 210 aa14.85□□□□□ -0.03
CLK3-210ENST00000563112 RPS4XP62701 263 aaKnown RBP14.85□□□□□ -0.03
CLK3-210ENST00000563112 CDK6Q00534 326 aa14.85□□□□□ -0.03
CLK3-210ENST00000563112 TGFBR3Q03167 851 aa14.85□□□□□ -0.03
CLK3-210ENST00000563112 C1orf140Q5VVS0 124 aa14.85□□□□□ -0.03
CLK3-210ENST00000563112 KLHL17Q6TDP4 642 aa14.85□□□□□ -0.03
CLK3-210ENST00000563112 MSRB3Q8IXL7 192 aa14.85□□□□□ -0.03
CLK3-210ENST00000563112 OR9K2Q8NGE7 335 aa14.85□□□□□ -0.03
CLK3-210ENST00000563112 STK35Q8TDR2 534 aa14.85□□□□□ -0.03
CLK3-210ENST00000563112 IGFBPL1Q8WX77 278 aa14.85□□□□□ -0.03
CLK3-210ENST00000563112 Q96MF0 132 aa14.85□□□□□ -0.03
CLK3-210ENST00000563112 ZNF607Q96SK3 696 aa14.85□□□□□ -0.03
CLK3-210ENST00000563112 SLC52A3Q9NQ40 469 aa14.85□□□□□ -0.03
CLK3-210ENST00000563112 ADPRHL2Q9NX46 363 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms