RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 UTP6Q9NYH9 597 aaKnown RBP2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 CNOT2Q9NZN8 540 aaKnown RBP2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 OR1A1Q9P1Q5 309 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 ONECUT1Q9UBC0 465 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 P2RX2Q9UBL9 471 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 FETUBQ9UGM5 382 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 TRAF3IP3Q9Y228 551 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 TMED5Q9Y3A6 229 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 MCM3APO60318 1980 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 RLFQ13129 1914 aa2.03□□□□□ -2.08
HDGFL3-202ENST00000562702 SIPA1L1O43166 1804 aa2.03□□□□□ -2.09
HDGFL3-202ENST00000562702 DOCK2Q92608 1830 aa2.03□□□□□ -2.09
HDGFL3-202ENST00000562702 SZT2Q5T011 3432 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 RGSL1A5PLK6 1076 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 ZSCAN5BA6NJL1 495 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 WASHC1A8K0Z3 465 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 H0YCG3 227 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 K7EPI3 171 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 AP3B1O00203 1094 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 RASGRF2O14827 1237 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 GMFGO60234 142 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 GPX5O75715 221 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 IDH1O75874 414 aaKnown RBP2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 TRIM16O95361 564 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 ALPPP05187 535 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 HPNP05981 417 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 TPM1P09493 284 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 ALPPL2P10696 532 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 SFTPCP11686 197 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 RPS12P25398 132 aaKnown RBP2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 ADSSP30520 456 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 GCKP35557 465 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 CAV2P51636 162 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 RPL8P62917 257 aaKnown RBP2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 BDH1Q02338 343 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 FUT7Q11130 342 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 RIPK1Q13546 671 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 GAMTQ14353 236 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 HERPUD1Q15011 391 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 IMMTQ16891 758 aaKnown RBP2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 RABL6Q3YEC7 729 aaPredicted RBP2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 PVRIGQ6DKI7 326 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 TMEM184AQ6ZMB5 413 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 TIFABQ6ZNK6 161 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 LPCAT2Q7L5N7 544 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 ZNF589Q86UQ0 364 aaPredicted RBP2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 IQCF2Q8IXL9 164 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 MKXQ8IYA7 352 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 ENTHD1Q8IYW4 607 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 RNF148Q8N7C7 305 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 FAM184AQ8NB25 1140 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 GMCL1P1Q8NEA9 526 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 OR56B1Q8NGI3 324 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 OR9A4Q8NGU2 314 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 FCGR1BQ92637 280 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 THRSPQ92748 146 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 UPRTQ96BW1 309 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 SDSLQ96GA7 329 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 FAM111AQ96PZ2 611 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 EBF4Q9BQW3 602 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 TBCDQ9BTW9 1192 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 STMN4Q9H169 189 aaPredicted RBP2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 OR51J1Q9H342 316 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 TDRD3Q9H7E2 651 aaKnown RBP2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 CD274Q9NZQ7 290 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 ANKMY1Q9P2S6 941 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 CRLS1Q9UJA2 301 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 CFAP45Q9UL16 551 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 SNX6Q9UNH7 406 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 PIN4Q9Y237 131 aaKnown RBP2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 DDX49Q9Y6V7 483 aaKnown RBP2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 CUL9Q8IWT3 2517 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 DOCK1Q14185 1865 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 COL11A1P12107 1806 aaPredicted RBP2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 LTBP2Q14767 1821 aa2.02□□□□□ -2.09
HDGFL3-202ENST00000562702 MYH1P12882 1939 aa2.01□□□□□ -2.09
HDGFL3-202ENST00000562702 PARP14Q460N5 1801 aa2.01□□□□□ -2.09
HDGFL3-202ENST00000562702 COL6A3P12111 3177 aa2.01□□□□□ -2.09
HDGFL3-202ENST00000562702 UBE4BO95155 1302 aa2.01□□□□□ -2.09
HDGFL3-202ENST00000562702 CTAGE15A4D2H0 777 aa2.01□□□□□ -2.09
HDGFL3-202ENST00000562702 RNF222A6NCQ9 220 aa2.01□□□□□ -2.09
HDGFL3-202ENST00000562702 WASH3PC4AMC7 463 aa2.01□□□□□ -2.09
HDGFL3-202ENST00000562702 ABCD4O14678 606 aa2.01□□□□□ -2.09
HDGFL3-202ENST00000562702 KLHL41O60662 606 aa2.01□□□□□ -2.09
HDGFL3-202ENST00000562702 E2F6O75461 281 aa2.01□□□□□ -2.09
HDGFL3-202ENST00000562702 MT-ATP6P00846 226 aa2.01□□□□□ -2.09
HDGFL3-202ENST00000562702 CHRNA1P02708 482 aa2.01□□□□□ -2.09
HDGFL3-202ENST00000562702 PCCAP05165 728 aaPredicted RBP2.01□□□□□ -2.09
HDGFL3-202ENST00000562702 ASNSP08243 561 aa2.01□□□□□ -2.09
HDGFL3-202ENST00000562702 ZNF853P0CG23 659 aa2.01□□□□□ -2.09
HDGFL3-202ENST00000562702 ANXA3P12429 323 aa2.01□□□□□ -2.09
HDGFL3-202ENST00000562702 UQCRBP14927 111 aa2.01□□□□□ -2.09
HDGFL3-202ENST00000562702 IGLL1P15814 213 aa2.01□□□□□ -2.09
HDGFL3-202ENST00000562702 ZNF17P17021 662 aa2.01□□□□□ -2.09
HDGFL3-202ENST00000562702 ATP5A1P25705 553 aaKnown RBP2.01□□□□□ -2.09
HDGFL3-202ENST00000562702 PBLDP30039 288 aaPredicted RBP2.01□□□□□ -2.09
HDGFL3-202ENST00000562702 STARP49675 285 aa2.01□□□□□ -2.09
HDGFL3-202ENST00000562702 MRPS11P82912 194 aaKnown RBP2.01□□□□□ -2.09
HDGFL3-202ENST00000562702 TLE4Q04727 773 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms