RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 MEPEQ9NQ76 525 aaPredicted RBP8.75□□□□□ -1.01
CLK3-208ENST00000562626 NDUFAF4Q9P032 175 aa8.75□□□□□ -1.01
CLK3-208ENST00000562626 RPS6KB2Q9UBS0 482 aa8.75□□□□□ -1.01
CLK3-208ENST00000562626 RIMS3Q9UJD0 308 aa8.75□□□□□ -1.01
CLK3-208ENST00000562626 RPS6KA6Q9UK32 745 aa8.75□□□□□ -1.01
CLK3-208ENST00000562626 CLEC4AQ9UMR7 237 aa8.75□□□□□ -1.01
CLK3-208ENST00000562626 POMPQ9Y244 141 aa8.75□□□□□ -1.01
CLK3-208ENST00000562626 SLC5A6Q9Y289 635 aa8.75□□□□□ -1.01
CLK3-208ENST00000562626 ENPP4Q9Y6X5 453 aa8.75□□□□□ -1.01
CLK3-208ENST00000562626 SPTAN1Q13813 2472 aaKnown RBP8.74□□□□□ -1.01
CLK3-208ENST00000562626 LIPT2A6NK58 231 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 SLC22A20A6NK97 555 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 A8MVM7 634 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 SULT2B1O00204 365 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 EBAG9O00559 213 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 KPNA4O00629 521 aaPredicted RBP8.74□□□□□ -1.01
CLK3-208ENST00000562626 OR5F1O95221 314 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 BGLAPP02818 100 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 IFNW1P05000 195 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 FPR1P21462 350 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 CBLP22681 906 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 SLC7A1P30825 629 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 NTF4P34130 210 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 RPS5P46782 204 aaKnown RBP8.74□□□□□ -1.01
CLK3-208ENST00000562626 P2RY4P51582 365 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 CASP6P55212 293 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 CARD18P57730 90 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 TAS2R41P59536 307 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 GUSBP1Q15486 140 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 SGCBQ16585 318 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 C1orf140Q5VVS0 124 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 PPP4R4Q6NUP7 873 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 VWA1Q6PCB0 445 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 CCDC121Q6ZUS5 278 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 FKBP9P1Q75LS8 142 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 CCDC103Q8IW40 242 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 ADGRG5Q8IZF4 528 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 EID3Q8N140 333 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 PFN4Q8NHR9 129 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 RNF128Q8TEB7 428 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 SLC25A43Q8WUT9 341 aaPredicted RBP8.74□□□□□ -1.01
CLK3-208ENST00000562626 TMEM255BQ8WV15 326 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 DNAJA4Q8WW22 397 aaPredicted RBP8.74□□□□□ -1.01
CLK3-208ENST00000562626 LZICQ8WZA0 190 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 SLCO4A1Q96BD0 722 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 INTS12Q96CB8 462 aaKnown RBP8.74□□□□□ -1.01
CLK3-208ENST00000562626 SLC47A1Q96FL8 570 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 ZNF300Q96RE9 604 aaPredicted RBP8.74□□□□□ -1.01
CLK3-208ENST00000562626 SEPHS2Q99611 448 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 EVA1AQ9H8M9 152 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 RNF122Q9H9V4 155 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 CALHM2Q9HA72 323 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 C12orf10Q9HB07 376 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 SERINC1Q9NRX5 453 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 C20orf141Q9NUB4 165 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 VNN3Q9NY84 501 aa8.74□□□□□ -1.01
CLK3-208ENST00000562626 SAMD4AQ9UPU9 718 aaKnown RBP8.74□□□□□ -1.01
CLK3-208ENST00000562626 ZNF716A6NP11 495 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 FZD7O75084 574 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 TNFSF13O75888 250 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 ATP5HO75947 161 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 AGFG2O95081 481 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 AKR7A3O95154 331 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 RCBTB2O95199 551 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 PMS2P2O95744 297 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 FUT1P19526 365 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 PTGER4P35408 488 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 IDUAP35475 653 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 TIMP3P35625 211 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 KIR2DL2P43627 348 aaPredicted RBP8.73□□□□□ -1.01
CLK3-208ENST00000562626 OR2B6P58173 313 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 RAC3P60763 192 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 RPS3AP61247 264 aaKnown RBP8.73□□□□□ -1.01
CLK3-208ENST00000562626 H3F3AP84243 136 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 TRAP1Q12931 704 aaKnown RBP8.73□□□□□ -1.01
CLK3-208ENST00000562626 PPP1R8Q12972 351 aaKnown RBP8.73□□□□□ -1.01
CLK3-208ENST00000562626 CCNIQ14094 377 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 SEC23BQ15437 767 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 OR7A5Q15622 319 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 RIPPLY2Q5TAB7 128 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 ABLIM2Q6H8Q1 611 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 TBPL2Q6SJ96 375 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 FCRLAQ7L513 359 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.73□□□□□ -1.01
CLK3-208ENST00000562626 SLC46A3Q7Z3Q1 461 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 MRGPRGQ86SM5 289 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 WDFY1Q8IWB7 410 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 OFCC1Q8IZS5 231 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 FAM26EQ8N5C1 309 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 LRRC17Q8N6Y2 441 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 TMEM99Q8N816 258 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 PIK3C3Q8NEB9 887 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 STK35Q8TDR2 534 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 WNT2BQ93097 391 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 ZNF775Q96BV0 537 aaPredicted RBP8.73□□□□□ -1.01
CLK3-208ENST00000562626 SDCCAG3Q96C92 435 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 DDIT4LQ96D03 193 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 FUZQ9BT04 418 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 POTEKPQ9BYX7 375 aa8.73□□□□□ -1.01
CLK3-208ENST00000562626 UCK2Q9BZX2 261 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms