RNA–Protein interactions for RNA: ENST00000562131.1

NIP7-203, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 4

Gene NIP7, Length 572 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-203ENST00000562131 OFCC1Q8IZS5 231 aa8.66□□□□□ -1.02
NIP7-203ENST00000562131 C9orf106Q8NAJ2 232 aa8.66□□□□□ -1.02
NIP7-203ENST00000562131 PIK3C3Q8NEB9 887 aa8.66□□□□□ -1.02
NIP7-203ENST00000562131 OR4K17Q8NGC6 315 aa8.66□□□□□ -1.02
NIP7-203ENST00000562131 MBD3L2Q8NHZ7 208 aaPredicted RBP8.66□□□□□ -1.02
NIP7-203ENST00000562131 ZPLD1Q8TCW7 415 aa8.66□□□□□ -1.02
NIP7-203ENST00000562131 CNOT9Q92600 299 aaKnown RBP8.66□□□□□ -1.02
NIP7-203ENST00000562131 RNASE6Q93091 150 aaKnown RBP8.66□□□□□ -1.02
NIP7-203ENST00000562131 SFXN2Q96NB2 322 aa8.66□□□□□ -1.02
NIP7-203ENST00000562131 RSPO3Q9BXY4 272 aaPredicted RBP8.66□□□□□ -1.02
NIP7-203ENST00000562131 DSN1Q9H410 356 aa8.66□□□□□ -1.02
NIP7-203ENST00000562131 HHATLQ9HCP6 504 aa8.66□□□□□ -1.02
NIP7-203ENST00000562131 EXOSC3Q9NQT5 275 aaKnown RBP8.66□□□□□ -1.02
NIP7-203ENST00000562131 C8orf4Q9NR00 106 aa8.66□□□□□ -1.02
NIP7-203ENST00000562131 CTPS2Q9NRF8 586 aa8.66□□□□□ -1.02
NIP7-203ENST00000562131 CRIM1Q9NZV1 1036 aa8.66□□□□□ -1.02
NIP7-203ENST00000562131 SELENONQ9NZV5 590 aa8.66□□□□□ -1.02
NIP7-203ENST00000562131 PPP4R1LQ9P1A2 415 aa8.66□□□□□ -1.02
NIP7-203ENST00000562131 RPS6KB2Q9UBS0 482 aa8.66□□□□□ -1.02
NIP7-203ENST00000562131 TMCC3Q9ULS5 477 aa8.66□□□□□ -1.02
NIP7-203ENST00000562131 CHST2Q9Y4C5 530 aa8.66□□□□□ -1.02
NIP7-203ENST00000562131 LYVE1Q9Y5Y7 322 aa8.66□□□□□ -1.02
NIP7-203ENST00000562131 B4DXG7 233 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 G3V2T6 193 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 HCRTR2O43614 444 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 FADS1O60427 444 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 ZIC3O60481 467 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 EIF4E2O60573 245 aaKnown RBP8.65□□□□□ -1.02
NIP7-203ENST00000562131 BCAS1O75363 584 aaPredicted RBP8.65□□□□□ -1.02
NIP7-203ENST00000562131 CTAG2O75638 210 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 OR5F1O95221 314 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 ANGPTL1O95841 491 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 TMIGD3P0DMS9 266 aaPredicted RBP8.65□□□□□ -1.02
NIP7-203ENST00000562131 OPRM1P35372 400 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 SLC6A8P48029 635 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 LHX2P50458 406 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 IST1P53990 364 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 GAS1P54826 345 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 GFRA1P56159 465 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 COPZ1P61923 177 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 HOXC5Q00444 222 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 ST3GAL3Q11203 375 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 FOXF2Q12947 444 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 PPP1R8Q12972 351 aaKnown RBP8.65□□□□□ -1.02
NIP7-203ENST00000562131 SKP2Q13309 424 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 PIN1Q13526 163 aaPredicted RBP8.65□□□□□ -1.02
NIP7-203ENST00000562131 TRAM2Q15035 370 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 CD226Q15762 336 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 ENTPD8Q5MY95 495 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 OTUD3Q5T2D3 398 aaPredicted RBP8.65□□□□□ -1.02
NIP7-203ENST00000562131 SHQ1Q6PI26 577 aaKnown RBP8.65□□□□□ -1.02
NIP7-203ENST00000562131 IZUMO2Q6UXV1 221 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 TSEN54Q7Z6J9 526 aaKnown RBP8.65□□□□□ -1.02
NIP7-203ENST00000562131 MARCH3Q86UD3 253 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 STK32CQ86UX6 486 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 PACRGLQ8N7B6 248 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 FAM71CQ8NEG0 241 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 TOR1AIP2Q8NFQ8 470 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 OR52J3Q8NH60 311 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 RNF217Q8TC41 542 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 ADAMTS16Q8TE57 1224 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 DUSP19Q8WTR2 217 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 NRG4Q8WWG1 115 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 INTS12Q96CB8 462 aaKnown RBP8.65□□□□□ -1.02
NIP7-203ENST00000562131 SLC41A3Q96GZ6 507 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 SH3YL1Q96HL8 342 aaPredicted RBP8.65□□□□□ -1.02
NIP7-203ENST00000562131 WFDC6Q9BQY6 131 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 POLDIP3Q9BY77 421 aaKnown RBP8.65□□□□□ -1.02
NIP7-203ENST00000562131 TRIM2Q9C040 744 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 NTN4Q9HB63 628 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 TMEM27Q9HBJ8 222 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 SDHAF3Q9NRP4 125 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 VNN3Q9NY84 501 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 MED11Q9P086 117 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 RHCGQ9UBD6 479 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 A4GNTQ9UNA3 340 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 CARD8Q9Y2G2 431 aa8.65□□□□□ -1.02
NIP7-203ENST00000562131 VPS13CQ709C8 3753 aa8.65□□□□□ -1.03
NIP7-203ENST00000562131 ARHGAP21Q5T5U3 1957 aa8.64□□□□□ -1.03
NIP7-203ENST00000562131 A0A1W2PRQ8 180 aa8.64□□□□□ -1.03
NIP7-203ENST00000562131 TRAPPC13A5PLN9 417 aa8.64□□□□□ -1.03
NIP7-203ENST00000562131 CLCA1A8K7I4 914 aa8.64□□□□□ -1.03
NIP7-203ENST00000562131 PDLIM1O00151 329 aa8.64□□□□□ -1.03
NIP7-203ENST00000562131 FAAHO00519 579 aa8.64□□□□□ -1.03
NIP7-203ENST00000562131 SOCS2O14508 198 aa8.64□□□□□ -1.03
NIP7-203ENST00000562131 EI24O14681 340 aa8.64□□□□□ -1.03
NIP7-203ENST00000562131 GMFGO60234 142 aa8.64□□□□□ -1.03
NIP7-203ENST00000562131 CCNB2O95067 398 aa8.64□□□□□ -1.03
NIP7-203ENST00000562131 NUDT14O95848 222 aa8.64□□□□□ -1.03
NIP7-203ENST00000562131 HPRP00739 348 aa8.64□□□□□ -1.03
NIP7-203ENST00000562131 LINGO3P0C6S8 592 aa8.64□□□□□ -1.03
NIP7-203ENST00000562131 THRBP10828 461 aa8.64□□□□□ -1.03
NIP7-203ENST00000562131 PRG2P13727 222 aa8.64□□□□□ -1.03
NIP7-203ENST00000562131 HK1P19367 917 aa8.64□□□□□ -1.03
NIP7-203ENST00000562131 PGCP20142 388 aa8.64□□□□□ -1.03
NIP7-203ENST00000562131 RYKP34925 604 aa8.64□□□□□ -1.03
NIP7-203ENST00000562131 PEX19P40855 299 aa8.64□□□□□ -1.03
NIP7-203ENST00000562131 ART1P52961 327 aa8.64□□□□□ -1.03
NIP7-203ENST00000562131 DSCR4P56555 118 aaPredicted RBP8.64□□□□□ -1.03
NIP7-203ENST00000562131 PLAURQ03405 335 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms