RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 XAGE5Q8WWM1 108 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 PNPLA2Q96AD5 504 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 ARL5BQ96KC2 179 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 FNDC11Q9BVV2 318 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 TAS2R5Q9NYW4 299 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 TRPC4Q9UBN4 977 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 APOBEC3BQ9UH17 382 aaKnown RBP12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 A4GNTQ9UNA3 340 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 GOLGA4Q13439 2230 aaKnown RBP12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 TEX46H3BTG2 121 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 ERAL1O75616 437 aaKnown RBP12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 REM1O75628 298 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 S100A8P05109 93 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 ANKRD34CP0C6C1 535 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 UBBP0CG47 229 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 UBCP0CG48 685 aaKnown RBP12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 NR2F1P10589 423 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 CERS1P27544 350 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 RPS27AP62979 156 aaKnown RBP12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 UBA52P62987 128 aaKnown RBP12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 NFATC4Q14934 902 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 ZNF791Q3KP31 576 aaPredicted RBP12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 ZNF528Q3MIS6 628 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 AADACL4Q5VUY2 407 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 ZNF660Q6AZW8 331 aaPredicted RBP12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 ENPP7Q6UWV6 458 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 DBX2Q6ZNG2 339 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 RBM45Q8IUH3 476 aaKnown RBP12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 BMPERQ8N8U9 685 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 OR4E2Q8NGC2 313 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 OR6S1Q8NH40 331 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 LCN9Q8WX39 176 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 CNRIP1Q96F85 164 aaPredicted RBP12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 ZNF251Q9BRH9 671 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 PDCD10Q9BUL8 212 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 SEMA4CQ9C0C4 833 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 ARL6Q9H0F7 186 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 ANKRD19PQ9H560 264 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 EXOSC3Q9NQT5 275 aaKnown RBP12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 CES1P1Q9UKY3 287 aa12.89□□□□□ -0.35
RABGGTA-220ENST00000560998 LINC00587B1AMM8 73 aa12.88□□□□□ -0.35
RABGGTA-220ENST00000560998 STX11O75558 287 aa12.88□□□□□ -0.35
RABGGTA-220ENST00000560998 RAB3BP20337 219 aa12.88□□□□□ -0.35
RABGGTA-220ENST00000560998 DRD5P21918 477 aa12.88□□□□□ -0.35
RABGGTA-220ENST00000560998 AK4P27144 223 aaPredicted RBP12.88□□□□□ -0.35
RABGGTA-220ENST00000560998 PPP2R1BP30154 601 aa12.88□□□□□ -0.35
RABGGTA-220ENST00000560998 PTGER1P34995 402 aa12.88□□□□□ -0.35
RABGGTA-220ENST00000560998 GDNFP39905 211 aa12.88□□□□□ -0.35
RABGGTA-220ENST00000560998 CAPZA2P47755 286 aa12.88□□□□□ -0.35
RABGGTA-220ENST00000560998 VEGFCP49767 419 aa12.88□□□□□ -0.35
RABGGTA-220ENST00000560998 GMFBP60983 142 aa12.88□□□□□ -0.35
RABGGTA-220ENST00000560998 DUSP2Q05923 314 aa12.88□□□□□ -0.35
RABGGTA-220ENST00000560998 TCEA2Q15560 299 aa12.88□□□□□ -0.35
RABGGTA-220ENST00000560998 MAPK14Q16539 360 aa12.88□□□□□ -0.35
RABGGTA-220ENST00000560998 ZNF750Q32MQ0 723 aa12.88□□□□□ -0.35
RABGGTA-220ENST00000560998 C18orf63Q68DL7 685 aa12.88□□□□□ -0.35
RABGGTA-220ENST00000560998 HAGHLQ6PII5 290 aaPredicted RBP12.88□□□□□ -0.35
RABGGTA-220ENST00000560998 IQCHQ86VS3 1027 aa12.88□□□□□ -0.35
RABGGTA-220ENST00000560998 MORN4Q8NDC4 146 aa12.88□□□□□ -0.35
RABGGTA-220ENST00000560998 SUN3Q8TAQ9 357 aa12.88□□□□□ -0.35
RABGGTA-220ENST00000560998 NR4A3Q92570 626 aa12.88□□□□□ -0.35
RABGGTA-220ENST00000560998 NARS2Q96I59 477 aaKnown RBP12.88□□□□□ -0.35
RABGGTA-220ENST00000560998 WFDC6Q9BQY6 131 aa12.88□□□□□ -0.35
RABGGTA-220ENST00000560998 TRIM36Q9NQ86 728 aa12.88□□□□□ -0.35
RABGGTA-220ENST00000560998 CEP290O15078 2479 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 H0Y8X5 98 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 SSX5O60225 188 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 ATG12O94817 140 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 FABP1P07148 127 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 ASGR2P07307 311 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 F3P13726 295 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 PVALBP20472 110 aaPredicted RBP12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 NDUFS1P28331 727 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 SHC1P29353 583 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 TSFMP43897 325 aaKnown RBP12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 DLX5P56178 289 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 TAS2R43P59537 309 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 STXBP1P61764 594 aaKnown RBP12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 ERVK-25P63136 954 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 LGALS3BPQ08380 585 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 SWI5Q1ZZU3 235 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 C6orf132Q5T0Z8 1188 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 OLFML2AQ68BL7 652 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 OR5M10Q6IEU7 315 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 SLC48A1Q6P1K1 146 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 COMTD1Q86VU5 262 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 SVBPQ8N300 66 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 DMBX1Q8NFW5 382 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 OR4F15Q8NGB8 312 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 BBS10Q8TAM1 723 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 WDR92Q96MX6 357 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 KCNK12Q9HB15 430 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 BEX1Q9HBH7 125 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 BCL2L10Q9HD36 194 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 HRASLSQ9HDD0 168 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 CA10Q9NS85 328 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 MBD2Q9UBB5 411 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 COL4A2P08572 1712 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 A0A1W2PS29 197 aa12.87□□□□□ -0.35
RABGGTA-220ENST00000560998 TMEM82A0PJX8 343 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms