RNA–Protein interactions for RNA: ENST00000560496.5

SNRPA1-212, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-212ENST00000560496 PANX1Q96RD7 426 aa8.91□□□□□ -0.98
SNRPA1-212ENST00000560496 CACNG6Q9BXT2 260 aa8.91□□□□□ -0.98
SNRPA1-212ENST00000560496 PARD6BQ9BYG5 372 aa8.91□□□□□ -0.98
SNRPA1-212ENST00000560496 SLC7A10Q9NS82 523 aa8.91□□□□□ -0.98
SNRPA1-212ENST00000560496 ASB6Q9NWX5 421 aa8.91□□□□□ -0.98
SNRPA1-212ENST00000560496 TMEM181Q9P2C4 612 aa8.91□□□□□ -0.98
SNRPA1-212ENST00000560496 DCTN4Q9UJW0 460 aa8.91□□□□□ -0.98
SNRPA1-212ENST00000560496 RAB21Q9UL25 225 aa8.91□□□□□ -0.98
SNRPA1-212ENST00000560496 TRAPPC4Q9Y296 219 aa8.91□□□□□ -0.98
SNRPA1-212ENST00000560496 B3GALT5Q9Y2C3 310 aa8.91□□□□□ -0.98
SNRPA1-212ENST00000560496 ABCA1O95477 2261 aa8.91□□□□□ -0.98
SNRPA1-212ENST00000560496 ARFGEF3Q5TH69 2177 aa8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 CIB4A0PJX0 185 aa8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 CDHR4A6H8M9 788 aa8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 FRS3O43559 492 aa8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 CD5LO43866 347 aa8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 MRPL33O75394 65 aaKnown RBP8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 GSNP06396 782 aa8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 HOXB9P17482 250 aaPredicted RBP8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 CCNA2P20248 432 aa8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 FKBP2P26885 142 aaKnown RBP8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 TTKP33981 857 aa8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 SLC1A3P43003 542 aa8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 MAGEA8P43361 318 aa8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 HTR3AP46098 478 aa8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 P2RY4P51582 365 aa8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 TXNL4AP83876 142 aaKnown RBP8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 NRF1Q16656 503 aa8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 GTDC1Q4AE62 458 aa8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 CEP85LQ5SZL2 805 aa8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 TSPO2Q5TGU0 170 aa8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 C9orf135Q5VTT2 229 aa8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 ZNF836Q6ZNA1 936 aa8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 SPATA19Q7Z5L4 167 aa8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 VRK2Q86Y07 508 aa8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 C17orf78Q8N4C9 275 aa8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 TRIML2Q8N7C3 387 aa8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 C1orf162Q8NEQ5 155 aaPredicted RBP8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 VPS33AQ96AX1 596 aa8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 TMEM45BQ96B21 275 aa8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 DDIT4LQ96D03 193 aa8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 HS6ST2Q96MM7 605 aa8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 MUS81Q96NY9 551 aa8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 WDR55Q9H6Y2 383 aaPredicted RBP8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 BARX1Q9HBU1 254 aaPredicted RBP8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 SLC17A5Q9NRA2 495 aa8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 FAIMQ9NVQ4 179 aa8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 MGAT4BQ9UQ53 548 aa8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 SLC9A8Q9Y2E8 581 aa8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 CHST2Q9Y4C5 530 aa8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 COL6A5A8TX70 2615 aa8.9□□□□□ -0.98
SNRPA1-212ENST00000560496 CFAP73A6NFT4 308 aa8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 LIPT2A6NK58 231 aa8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 AQP7P3A6NL99 342 aa8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 CCT8L1PA6NM43 557 aa8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 TMEM229AB2RXF0 380 aa8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 H7C417 338 aa8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 M0R1B8 84 aa8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 HDAC3O15379 428 aa8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 SSX4O60224 188 aa8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 EIF1BO60739 113 aaKnown RBP8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 BCHEP06276 602 aa8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 DBIP07108 87 aaKnown RBP8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 NR2F1P10589 423 aa8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 ETFAP13804 333 aa8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 IL7RP16871 459 aa8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 PTAFRP25105 342 aa8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 ACAA2P42765 397 aaKnown RBP8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 ANXA11P50995 505 aaKnown RBP8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 NUDT6P53370 316 aa8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 SLC35A1P78382 337 aa8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 LRRC74AQ0VAA2 488 aa8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 SLC9B1Q4ZJI4 515 aa8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 LIN52Q52LA3 116 aa8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 PDCD4Q53EL6 469 aaKnown RBP8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 RPS26P11Q5JNZ5 115 aaPredicted RBP8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 OTUD3Q5T2D3 398 aaPredicted RBP8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 SWT1Q5T5J6 900 aaKnown RBP8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 RNF220Q5VTB9 566 aa8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 AGAP6Q5VW22 663 aa8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 SLC22A25Q6T423 547 aa8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 MUC15Q8N387 334 aa8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 ANKRD42Q8N9B4 389 aa8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 ZIC4Q8N9L1 334 aa8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 OR10H5Q8NGA6 315 aa8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 HTRA1Q92743 480 aa8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 AURKBQ96GD4 344 aaPredicted RBP8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 RADILQ96JH8 1075 aa8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 ZNF385AQ96PM9 386 aaKnown RBP8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 OR52E6Q96RD3 313 aa8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 DHRS9Q9BPW9 319 aa8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 ADAM19Q9H013 955 aa8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 CBLN4Q9NTU7 201 aa8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 RLIMQ9NVW2 624 aa8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 P2RX2Q9UBL9 471 aa8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 ZNF443Q9Y2A4 671 aaPredicted RBP8.89□□□□□ -0.99
SNRPA1-212ENST00000560496 TMEM120BA0PK00 339 aa8.88□□□□□ -0.99
SNRPA1-212ENST00000560496 VGLL3A8MV65 326 aa8.88□□□□□ -0.99
SNRPA1-212ENST00000560496 ATP6V1G2-DDX39BF2Z307 99 aa8.88□□□□□ -0.99
SNRPA1-212ENST00000560496 RFXANKO14593 260 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms