RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 TMIGD3P0DMS9 266 aaPredicted RBP12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 FCGR1AP12314 374 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 FASP25445 335 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 SFTPDP35247 375 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 ZNF239Q16600 458 aaKnown RBP12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 DUSP7Q16829 419 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 ZNF613Q6PF04 617 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 TMPPEQ6ZT21 453 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 CADM2Q8N3J6 435 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 STK35Q8TDR2 534 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 OSTF1Q92882 214 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 POP5Q969H6 163 aaKnown RBP12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 TAMM41Q96BW9 452 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 GMPPAQ96IJ6 420 aaPredicted RBP12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 PRRG4Q9BZD6 226 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 PIGMQ9H3S5 423 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 TMEM185BQ9H7F4 350 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 COQ10BQ9H8M1 238 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 SLC24A3Q9HC58 644 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 DCAF13Q9NV06 445 aaKnown RBP12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 TMED7Q9Y3B3 224 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 MED12Q93074 2177 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 A8MVM7 634 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 IL11P20809 199 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 CD247P20963 164 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 PCYT1AP49585 367 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 ZNF136P52737 540 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 SELENOWP63302 87 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 ATP6AP1Q15904 470 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 FAM86B1Q8N7N1 296 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 C9orf106Q8NAJ2 232 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 SMYD1Q8NB12 490 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 ICA1LQ8NDH6 482 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 FNDC9Q8TBE3 224 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 RNF128Q8TEB7 428 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 C3orf49Q96BT1 292 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 ZNF524Q96C55 264 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 SLC47A1Q96FL8 570 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 CENPNQ96H22 339 aaPredicted RBP12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 OR5B2Q96R09 309 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 CHID1Q9BWS9 393 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 KCNJ16Q9NPI9 418 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 RPS6KA6Q9UK32 745 aa12.54□□□□□ -0.4
PKNOX1-209ENST00000560448 ELOA3DA6NLF2 546 aaPredicted RBP12.53□□□□□ -0.4
PKNOX1-209ENST00000560448 SULT2B1O00204 365 aa12.53□□□□□ -0.4
PKNOX1-209ENST00000560448 OR2T1O43869 369 aa12.53□□□□□ -0.4
PKNOX1-209ENST00000560448 CXCL13O43927 109 aa12.53□□□□□ -0.4
PKNOX1-209ENST00000560448 PRSS23O95084 383 aa12.53□□□□□ -0.4
PKNOX1-209ENST00000560448 OPN1SWP03999 348 aa12.53□□□□□ -0.4
PKNOX1-209ENST00000560448 RAP2AP10114 183 aa12.53□□□□□ -0.4
PKNOX1-209ENST00000560448 TFPIP10646 304 aa12.53□□□□□ -0.4
PKNOX1-209ENST00000560448 PRG2P13727 222 aa12.53□□□□□ -0.4
PKNOX1-209ENST00000560448 IFNA8P32881 189 aa12.53□□□□□ -0.4
PKNOX1-209ENST00000560448 DIO1P49895 249 aa12.53□□□□□ -0.4
PKNOX1-209ENST00000560448 CRYBA2P53672 197 aa12.53□□□□□ -0.4
PKNOX1-209ENST00000560448 ELOA3BQ3SY89 546 aa12.53□□□□□ -0.4
PKNOX1-209ENST00000560448 FBXL19-AS1Q494R0 122 aa12.53□□□□□ -0.4
PKNOX1-209ENST00000560448 LRRC23Q53EV4 343 aaPredicted RBP12.53□□□□□ -0.4
PKNOX1-209ENST00000560448 ALG10BQ5I7T1 473 aa12.53□□□□□ -0.4
PKNOX1-209ENST00000560448 PPP4R4Q6NUP7 873 aa12.53□□□□□ -0.4
PKNOX1-209ENST00000560448 ATG4DQ86TL0 474 aaPredicted RBP12.53□□□□□ -0.4
PKNOX1-209ENST00000560448 ELOA3Q8NG57 546 aa12.53□□□□□ -0.4
PKNOX1-209ENST00000560448 GPR32P1Q8NGA4 272 aa12.53□□□□□ -0.4
PKNOX1-209ENST00000560448 FAM162AQ96A26 154 aa12.53□□□□□ -0.4
PKNOX1-209ENST00000560448 MPP4Q96JB8 637 aa12.53□□□□□ -0.4
PKNOX1-209ENST00000560448 SEPHS2Q99611 448 aa12.53□□□□□ -0.4
PKNOX1-209ENST00000560448 SLC29A1Q99808 456 aa12.53□□□□□ -0.4
PKNOX1-209ENST00000560448 KLHL9Q9P2J3 617 aa12.53□□□□□ -0.4
PKNOX1-209ENST00000560448 EMC9Q9Y3B6 208 aa12.53□□□□□ -0.4
PKNOX1-209ENST00000560448 DOCK7Q96N67 2140 aa12.52□□□□□ -0.4
PKNOX1-209ENST00000560448 TENM4Q6N022 2769 aa12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 A0A0B4J2E0 115 aa12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 A0A1B0GX12 115 aa12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 TMEM229AB2RXF0 380 aa12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 H0YC42 278 aa12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 DENRO43583 198 aaKnown RBP12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 TGM6O95932 706 aa12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 PLGP00747 810 aaPredicted RBP12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 RNF224P0DH78 156 aa12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 THRBP10828 461 aa12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 ENPP1P22413 925 aa12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 AGFG1P52594 562 aaKnown RBP12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 TPD52P55327 224 aaPredicted RBP12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 SLC35A1P78382 337 aa12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 MYBPHQ13203 477 aa12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 MFSD13AQ14CX5 517 aa12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 PDK3Q15120 406 aa12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 FAM98BQ52LJ0 330 aaKnown RBP12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 CYBRD1Q53TN4 286 aa12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 POMZP3Q6PJE2 187 aa12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 FCRLAQ7L513 359 aa12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 FAM214BQ7L5A3 538 aa12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 EPHX4Q8IUS5 362 aa12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 MCEMP1Q8IX19 187 aa12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 NAXEQ8NCW5 288 aa12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 ATP6V1C2Q8NEY4 427 aa12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 OR6S1Q8NH40 331 aa12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 SLC38A4Q969I6 547 aa12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 EME1Q96AY2 570 aa12.52□□□□□ -0.41
PKNOX1-209ENST00000560448 ZNF845Q96IR2 970 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms