RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 XPAP23025 273 aaPredicted RBP17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 ACKR3P25106 362 aa17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 OR1D2P34982 312 aa17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 ACVRL1P37023 503 aa17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 HBA1P69905 142 aa17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 FOXO1Q12778 655 aa17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 DDX39BQ13838 428 aaKnown RBP17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 ZNF235Q14590 738 aa17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 SSPNQ14714 243 aa17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 LIPJQ5W064 366 aa17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 C16orf59Q7L2K0 433 aa17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 OR5AK3PQ8NH89 298 aa17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 LRIG1Q96JA1 1093 aa17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 SLC32A1Q9H598 525 aa17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 PRM3Q9NNZ6 103 aa17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 HS3ST4Q9Y661 456 aa17.7■□□□□ 0.42
SEMA4B-215ENST00000560089 PTPRDP23468 1912 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 A0A1W2PQH9 124 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 ANKRD20A5PA0PJZ0 165 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 RDH16O75452 317 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 BDH1Q02338 343 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 PTSQ03393 145 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 MRPL58Q14197 206 aaKnown RBP17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 ZNF345Q14585 488 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 RSU1Q15404 277 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 ELAVL1Q15717 326 aaKnown RBP17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 NDUFA9Q16795 377 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 ZDHHC20Q5W0Z9 365 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 FRG2Q64ET8 278 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 PODNL1Q6PEZ8 512 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 PAPD4Q6PIY7 484 aaKnown RBP17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 ABHD13Q7L211 337 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 BEST3Q8N1M1 668 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 UMODL1-AS1Q8N2C9 162 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 UBAC2Q8NBM4 344 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 OR4K1Q8NGD4 311 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 LGALS14Q8TCE9 139 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 ISOC2Q96AB3 205 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 ASB16Q96NS5 453 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 TGM7Q96PF1 710 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 FRG2BQ96QU4 278 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 P2RY12Q9H244 342 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 PCDHB1Q9Y5F3 818 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 SZT2Q5T011 3432 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 ANKRD61A6NGH8 418 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 PCDH8O95206 1070 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 TBX18O95935 607 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 IGHA1P01876 353 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 HOXB5P09067 269 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 SFTA3P0C7M3 94 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 HOXA5P20719 270 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 TBXA2RP21731 343 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 GLP1RP43220 463 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 BIKQ13323 160 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 TOMM20Q15388 145 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 TMEM244Q5VVB8 128 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 SYT9Q86SS6 491 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 TMPRSS11BQ86T26 416 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 ABHD4Q8TB40 342 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 IGSF21Q96ID5 467 aa17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 WRAP53Q9BUR4 548 aaKnown RBP17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 MRPL17Q9NRX2 175 aaKnown RBP17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 CXXC1Q9P0U4 656 aaPredicted RBP17.69■□□□□ 0.42
SEMA4B-215ENST00000560089 A0A1W2PPH5 198 aa17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 BLOC1S5-TXNDC5H3BN57 136 aa17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 CACNG1Q06432 222 aa17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 ACSM2AQ08AH3 577 aa17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 INPP5JQ15735 1006 aaPredicted RBP17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 RPS26P11Q5JNZ5 115 aaPredicted RBP17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 UBE2NLQ5JXB2 153 aa17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 ACSM2BQ68CK6 577 aa17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 GLT8D1Q68CQ7 371 aa17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 IQCHQ86VS3 1027 aa17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 MEX3DQ86XN8 651 aaKnown RBP17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 FBXO22Q8NEZ5 403 aa17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 BADQ92934 168 aa17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 GPA33Q99795 319 aa17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 ZNF230Q9UIE0 474 aaPredicted RBP17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 PDE4DIPQ5VU43 2346 aa17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 UNC80Q8N2C7 3258 aa17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 IFITM10A6NMD0 228 aa17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 ARAFP10398 606 aa17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 ACP5P13686 325 aa17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 LPOP22079 712 aaPredicted RBP17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 PDHA2P29803 388 aa17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 CDX1P47902 265 aaPredicted RBP17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 PJVKQ0ZLH3 352 aa17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 PLA2G7Q13093 441 aa17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 TRAM1Q15629 374 aa17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 RPE65Q16518 533 aa17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 OR5W2Q8NH69 310 aa17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 DTD1Q8TEA8 209 aa17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 APOBEC4Q8WW27 367 aaKnown RBP17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 ASB13Q8WXK3 278 aa17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 LHX9Q9NQ69 397 aa17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 PARPBPQ9NWS1 579 aa17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 TNFSF18Q9UNG2 199 aa17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 RUVBL1Q9Y265 456 aaKnown RBP17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 MYO7AQ13402 2215 aa17.68■□□□□ 0.42
SEMA4B-215ENST00000560089 MYO10Q9HD67 2058 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms