RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 MDGA2Q7Z553 956 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 CNEP1R1Q8N9A8 125 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 CLEC1AQ8NC01 280 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 RAB3CQ96E17 227 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 TMEM19Q96HH6 336 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 NOCTQ9UK39 431 aaKnown RBP12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 IER3IP1Q9Y5U9 82 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 SOCS6O14544 535 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 HSD17B6O14756 317 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 ZNF90Q03938 601 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 OR5I1Q13606 314 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 HES1Q14469 280 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 OR8B8Q15620 311 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 RGMBQ6NW40 437 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 BORCS6Q96GS4 357 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 PIGMQ9H3S5 423 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 MED9Q9NWA0 146 aa12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 SETD1AO15047 1707 aaKnown RBP12.99□□□□□ -0.33
CSPG4P12-202ENST00000559989 S100A8P05109 93 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 CD63P08962 238 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 TGM1P22735 817 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 PTAFRP25105 342 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 GABREP78334 506 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 SQSTM1Q13501 440 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 GPR18Q14330 331 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 TMPRSS11FQ6ZWK6 438 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 DCAF4L2Q8NA75 395 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 DPH2Q9BQC3 489 aaPredicted RBP12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 VAMP8Q9BV40 100 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 BCO2Q9BYV7 579 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 NECAP2Q9NVZ3 263 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 GNG12Q9UBI6 72 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 CLINT1Q14677 625 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 INIPQ9NRY2 104 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 FBXL2Q9UKC9 423 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 LHX6Q9UPM6 363 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 CAMK2AQ9UQM7 478 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 LOC102724200A0A096LPH7 203 aaPredicted RBP12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 TAS2R45P59539 299 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 FPGSQ05932 587 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 DNAJC5GQ8N7S2 189 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 SDR9C7Q8NEX9 313 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 CMASQ8NFW8 434 aaPredicted RBP12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 IRF7Q92985 503 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 CLSTN3Q9BQT9 956 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 LINC00597Q9H2U6 94 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 TMEM212A6NML5 194 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 C18orf63Q68DL7 685 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 CPOQ8IVL8 374 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 CLDN19Q8N6F1 224 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 APH1BQ8WW43 257 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 CTDSP1Q9GZU7 261 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 DBX1A6NMT0 343 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 PHF1O43189 567 aaPredicted RBP12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 CACNG3O60359 315 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 ITGAMP11215 1152 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 KIR2DL3P43628 341 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 SLC11A1P49279 550 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 SELPLGQ14242 412 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 ENDOGQ14249 297 aaKnown RBP12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 DACT2Q5SW24 774 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 COL13A1Q5TAT6 717 aaPredicted RBP12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 ADGRG5Q8IZF4 528 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 SLC35E1Q96K37 410 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 SMOQ99835 787 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 EMC7Q9NPA0 242 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 ACSS1Q9NUB1 689 aaPredicted RBP12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 USP36Q9P275 1121 aaKnown RBP12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 ZNF626Q68DY1 528 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 NADSYN1Q6IA69 706 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 FAM163AQ96GL9 167 aaPredicted RBP12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 GALNT9Q9HCQ5 603 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 RIMS3Q9UJD0 308 aa12.98□□□□□ -0.33
CSPG4P12-202ENST00000559989 TPPP2P59282 170 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 TBCEQ15813 527 aaPredicted RBP12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 RPS26P11Q5JNZ5 115 aaPredicted RBP12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 SLC51BQ86UW2 128 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 PARP16Q8N5Y8 322 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 SFT2D1Q8WV19 159 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 SUSD3Q96L08 255 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 TMEM184BQ9Y519 407 aaPredicted RBP12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 KLK4Q9Y5K2 254 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 PSMB10P40306 273 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 ZNF133P52736 654 aaPredicted RBP12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 CXCR4P61073 352 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 SELENOWP63302 87 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 TRIM61Q5EBN2 209 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 CISD2Q8N5K1 135 aaKnown RBP12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 PIGQQ9BRB3 760 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 LYRM2Q9NU23 88 aaPredicted RBP12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 KIAA1456Q9P272 454 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 IQGAP1P46940 1657 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 TBX18O95935 607 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 LTB4RQ15722 352 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 MAMDC4Q6UXC1 1216 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 MEPCEQ7L2J0 689 aaKnown RBP12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 GRINAQ7Z429 371 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 LRRTM1Q86UE6 522 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 LPAR4Q99677 370 aa12.97□□□□□ -0.33
CSPG4P12-202ENST00000559989 PCED1AQ9H1Q7 454 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms