RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 CDH10Q9Y6N8 788 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 HSPE1-MOB4S4R3N1 261 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 PINLYPA6NC86 204 aa12.94□□□□□ -0.34
RABGGTA-209ENST00000559551 EFCAB9A8MZ26 197 aa12.94□□□□□ -0.34
RABGGTA-209ENST00000559551 SNPHO15079 494 aa12.94□□□□□ -0.34
RABGGTA-209ENST00000559551 XPNPEP2O43895 674 aa12.94□□□□□ -0.34
RABGGTA-209ENST00000559551 NOL3O60936 208 aaKnown RBP12.94□□□□□ -0.34
RABGGTA-209ENST00000559551 CH25HO95992 272 aa12.94□□□□□ -0.34
RABGGTA-209ENST00000559551 DCKP27707 260 aa12.94□□□□□ -0.34
RABGGTA-209ENST00000559551 MSX1P28360 303 aa12.94□□□□□ -0.34
RABGGTA-209ENST00000559551 PSMD7P51665 324 aa12.94□□□□□ -0.34
RABGGTA-209ENST00000559551 TPD52P55327 224 aaPredicted RBP12.94□□□□□ -0.34
RABGGTA-209ENST00000559551 SOX8P57073 446 aa12.94□□□□□ -0.34
RABGGTA-209ENST00000559551 TUBA3CQ13748 450 aa12.94□□□□□ -0.34
RABGGTA-209ENST00000559551 SLC25A53Q5H9E4 307 aa12.94□□□□□ -0.34
RABGGTA-209ENST00000559551 CLEC12AQ5QGZ9 265 aa12.94□□□□□ -0.34
RABGGTA-209ENST00000559551 BROXQ5VW32 411 aa12.94□□□□□ -0.34
RABGGTA-209ENST00000559551 SPINK14Q6IE38 97 aa12.94□□□□□ -0.34
RABGGTA-209ENST00000559551 TUBA3EQ6PEY2 450 aa12.94□□□□□ -0.34
RABGGTA-209ENST00000559551 CLDN22Q8N7P3 220 aa12.94□□□□□ -0.34
RABGGTA-209ENST00000559551 PSD4Q8NDX1 1056 aa12.94□□□□□ -0.34
RABGGTA-209ENST00000559551 OR51A7Q8NH64 312 aa12.94□□□□□ -0.34
RABGGTA-209ENST00000559551 ST8SIA1Q92185 356 aa12.94□□□□□ -0.34
RABGGTA-209ENST00000559551 TAAR8Q969N4 342 aa12.94□□□□□ -0.34
RABGGTA-209ENST00000559551 SGTBQ96EQ0 304 aa12.94□□□□□ -0.34
RABGGTA-209ENST00000559551 APOL4Q9BPW4 351 aa12.94□□□□□ -0.34
RABGGTA-209ENST00000559551 SLC19A3Q9BZV2 496 aa12.94□□□□□ -0.34
RABGGTA-209ENST00000559551 OR11A1Q9GZK7 315 aa12.94□□□□□ -0.34
RABGGTA-209ENST00000559551 PAK1IP1Q9NWT1 392 aaPredicted RBP12.94□□□□□ -0.34
RABGGTA-209ENST00000559551 ENOPH1Q9UHY7 261 aa12.94□□□□□ -0.34
RABGGTA-209ENST00000559551 TMEM5Q9Y2B1 443 aa12.94□□□□□ -0.34
RABGGTA-209ENST00000559551 A6NL46 340 aa12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 SUSD5O60279 629 aa12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 TRIM3O75382 744 aaPredicted RBP12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 WDPCPO95876 746 aa12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 TCEA1P23193 301 aaKnown RBP12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 CRHBPP24387 322 aa12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 POLR2HP52434 150 aaKnown RBP12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 ZNF74Q16587 644 aa12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 LINC00696Q6ZRV3 163 aa12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 BCDIN3DQ7Z5W3 292 aaKnown RBP12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 PLCZ1Q86YW0 608 aa12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 CLEC1AQ8NC01 280 aa12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 SETD9Q8NE22 299 aa12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 OR5M1Q8NGP8 315 aa12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 HDAC2Q92769 488 aaKnown RBP12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 ITPKCQ96DU7 683 aa12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 C1GALT1C1Q96EU7 318 aa12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 GNRHR2Q96P88 292 aa12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 TSSK6Q9BXA6 273 aa12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 HES7Q9BYE0 225 aa12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 YTHDF1Q9BYJ9 559 aaKnown RBP12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 ING2Q9H160 280 aa12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 SDHAF3Q9NRP4 125 aa12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 LRRC3CA6NJW4 275 aa12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 BOLA2-SMG1P6H3BVE0 249 aa12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 SLC1A7O00341 560 aa12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 PRKYO43930 277 aa12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 OR7A10O76100 309 aa12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 HTR1AP08908 422 aa12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 SAGP10523 405 aaPredicted RBP12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 CYB561P49447 251 aa12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 FANK1Q8TC84 345 aa12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 LIPHQ8WWY8 451 aa12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 THAP4Q8WY91 577 aa12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 UBL7Q96S82 380 aaPredicted RBP12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 UBQLN3Q9H347 655 aa12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 HHATLQ9HCP6 504 aa12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 LRFN1Q9P244 771 aa12.93□□□□□ -0.34
RABGGTA-209ENST00000559551 ZNF407Q9C0G0 2248 aa12.92□□□□□ -0.34
RABGGTA-209ENST00000559551 TRIM64BA6NI03 449 aa12.92□□□□□ -0.34
RABGGTA-209ENST00000559551 BHLHE40O14503 412 aa12.92□□□□□ -0.34
RABGGTA-209ENST00000559551 IGF2P01344 180 aa12.92□□□□□ -0.34
RABGGTA-209ENST00000559551 BGLAPP02818 100 aa12.92□□□□□ -0.34
RABGGTA-209ENST00000559551 OCM2P0CE71 109 aa12.92□□□□□ -0.34
RABGGTA-209ENST00000559551 OCMP0CE72 109 aaPredicted RBP12.92□□□□□ -0.34
RABGGTA-209ENST00000559551 CXCR1P25024 350 aa12.92□□□□□ -0.34
RABGGTA-209ENST00000559551 RPS5P46782 204 aaKnown RBP12.92□□□□□ -0.34
RABGGTA-209ENST00000559551 MLLT10P55197 1068 aa12.92□□□□□ -0.34
RABGGTA-209ENST00000559551 GPR85P60893 370 aa12.92□□□□□ -0.34
RABGGTA-209ENST00000559551 RPS4XP62701 263 aaKnown RBP12.92□□□□□ -0.34
RABGGTA-209ENST00000559551 PIGFQ07326 219 aa12.92□□□□□ -0.34
RABGGTA-209ENST00000559551 DBPQ10586 325 aaPredicted RBP12.92□□□□□ -0.34
RABGGTA-209ENST00000559551 CDC20Q12834 499 aa12.92□□□□□ -0.34
RABGGTA-209ENST00000559551 ABHD17BQ5VST6 288 aa12.92□□□□□ -0.34
RABGGTA-209ENST00000559551 TIGD3Q6B0B8 471 aa12.92□□□□□ -0.34
RABGGTA-209ENST00000559551 NCCRP1Q6ZVX7 275 aaPredicted RBP12.92□□□□□ -0.34
RABGGTA-209ENST00000559551 TMEM41AQ96HV5 264 aa12.92□□□□□ -0.34
RABGGTA-209ENST00000559551 PLEKHA8Q96JA3 519 aa12.92□□□□□ -0.34
RABGGTA-209ENST00000559551 IL4I1Q96RQ9 567 aa12.92□□□□□ -0.34
RABGGTA-209ENST00000559551 TUBA1CQ9BQE3 449 aa12.92□□□□□ -0.34
RABGGTA-209ENST00000559551 DCUN1D5Q9BTE7 237 aa12.92□□□□□ -0.34
RABGGTA-209ENST00000559551 ZNF552Q9H707 407 aaPredicted RBP12.92□□□□□ -0.34
RABGGTA-209ENST00000559551 KRCC1Q9NPI7 259 aaPredicted RBP12.92□□□□□ -0.34
RABGGTA-209ENST00000559551 RYDENQ9NUL5 291 aaKnown RBP12.92□□□□□ -0.34
RABGGTA-209ENST00000559551 TVP23BQ9NYZ1 205 aa12.92□□□□□ -0.34
RABGGTA-209ENST00000559551 SEC14L4Q9UDX3 406 aa12.92□□□□□ -0.34
RABGGTA-209ENST00000559551 ANKRD11Q6UB99 2663 aaPredicted RBP12.92□□□□□ -0.34
RABGGTA-209ENST00000559551 H3BMQ9 156 aa12.92□□□□□ -0.34
RABGGTA-209ENST00000559551 SLC2A10O95528 541 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms