RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 ESRP2Q9H6T0 727 aaKnown RBP15.01□□□□□ -0.01
LRRC28-210ENST00000558879 NPAP1Q9NZP6 1156 aa15.01□□□□□ -0.01
LRRC28-210ENST00000558879 LIPT2A6NK58 231 aa15□□□□□ -0.01
LRRC28-210ENST00000558879 OR5H1A6NKK0 313 aa15□□□□□ -0.01
LRRC28-210ENST00000558879 FRS3O43559 492 aa15□□□□□ -0.01
LRRC28-210ENST00000558879 NPIPB7O75200 414 aa15□□□□□ -0.01
LRRC28-210ENST00000558879 CD3EP07766 207 aa15□□□□□ -0.01
LRRC28-210ENST00000558879 ITGA5P08648 1049 aa15□□□□□ -0.01
LRRC28-210ENST00000558879 INHBBP09529 407 aa15□□□□□ -0.01
LRRC28-210ENST00000558879 ARAFP10398 606 aa15□□□□□ -0.01
LRRC28-210ENST00000558879 PRG2P13727 222 aa15□□□□□ -0.01
LRRC28-210ENST00000558879 GGT1P19440 569 aa15□□□□□ -0.01
LRRC28-210ENST00000558879 IDUAP35475 653 aa15□□□□□ -0.01
LRRC28-210ENST00000558879 AQP5P55064 265 aa15□□□□□ -0.01
LRRC28-210ENST00000558879 IRX1P78414 480 aaPredicted RBP15□□□□□ -0.01
LRRC28-210ENST00000558879 BSPH1Q075Z2 132 aa15□□□□□ -0.01
LRRC28-210ENST00000558879 PPA1Q15181 289 aa15□□□□□ -0.01
LRRC28-210ENST00000558879 KRTAP21-3Q3LHN1 58 aa15□□□□□ -0.01
LRRC28-210ENST00000558879 PAGE3Q5JUK9 113 aa15□□□□□ -0.01
LRRC28-210ENST00000558879 YTHDF3Q7Z739 585 aaKnown RBP15□□□□□ -0.01
LRRC28-210ENST00000558879 SERPINA11Q86U17 422 aa15□□□□□ -0.01
LRRC28-210ENST00000558879 P2RY8Q86VZ1 359 aa15□□□□□ -0.01
LRRC28-210ENST00000558879 C10orf111Q8N326 155 aa15□□□□□ -0.01
LRRC28-210ENST00000558879 BBS10Q8TAM1 723 aa15□□□□□ -0.01
LRRC28-210ENST00000558879 TMEM171Q8WVE6 324 aa15□□□□□ -0.01
LRRC28-210ENST00000558879 MAL2Q969L2 176 aa15□□□□□ -0.01
LRRC28-210ENST00000558879 C3orf49Q96BT1 292 aa15□□□□□ -0.01
LRRC28-210ENST00000558879 SPDL1Q96EA4 605 aa15□□□□□ -0.01
LRRC28-210ENST00000558879 RSPO3Q9BXY4 272 aaPredicted RBP15□□□□□ -0.01
LRRC28-210ENST00000558879 AMBRA1Q9C0C7 1298 aa15□□□□□ -0.01
LRRC28-210ENST00000558879 TMEM45AQ9NWC5 275 aa15□□□□□ -0.01
LRRC28-210ENST00000558879 CCDC167Q9P0B6 97 aa15□□□□□ -0.01
LRRC28-210ENST00000558879 VAPAQ9P0L0 249 aa15□□□□□ -0.01
LRRC28-210ENST00000558879 SLC9A8Q9Y2E8 581 aa15□□□□□ -0.01
LRRC28-210ENST00000558879 IFT52Q9Y366 437 aa15□□□□□ -0.01
LRRC28-210ENST00000558879 CHD3Q12873 2000 aaKnown RBP15□□□□□ -0.01
LRRC28-210ENST00000558879 NAV3Q8IVL0 2385 aa14.99□□□□□ -0.01
LRRC28-210ENST00000558879 YLPM1P49750 1951 aaKnown RBP14.99□□□□□ -0.01
LRRC28-210ENST00000558879 TMEM247A6NEH6 219 aa14.99□□□□□ -0.01
LRRC28-210ENST00000558879 DPRXA6NFQ7 191 aa14.99□□□□□ -0.01
LRRC28-210ENST00000558879 AQP7P3A6NL99 342 aa14.99□□□□□ -0.01
LRRC28-210ENST00000558879 HMGB1P1B2RPK0 211 aaPredicted RBP14.99□□□□□ -0.01
LRRC28-210ENST00000558879 NR5A2O00482 541 aa14.99□□□□□ -0.01
LRRC28-210ENST00000558879 FZD7O75084 574 aa14.99□□□□□ -0.01
LRRC28-210ENST00000558879 RAD51DO75771 328 aa14.99□□□□□ -0.01
LRRC28-210ENST00000558879 IGHV3-9P01782 118 aa14.99□□□□□ -0.01
LRRC28-210ENST00000558879 DANCRP0C864 163 aa14.99□□□□□ -0.01
LRRC28-210ENST00000558879 H2AFXP16104 143 aaPredicted RBP14.99□□□□□ -0.01
LRRC28-210ENST00000558879 HOXB4P17483 251 aaPredicted RBP14.99□□□□□ -0.01
LRRC28-210ENST00000558879 ADSLP30566 484 aaPredicted RBP14.99□□□□□ -0.01
LRRC28-210ENST00000558879 P2RY4P51582 365 aa14.99□□□□□ -0.01
LRRC28-210ENST00000558879 STK11Q15831 433 aa14.99□□□□□ -0.01
LRRC28-210ENST00000558879 KBTBD8Q8NFY9 601 aa14.99□□□□□ -0.01
LRRC28-210ENST00000558879 FBXW5Q969U6 566 aa14.99□□□□□ -0.01
LRRC28-210ENST00000558879 TMEM45BQ96B21 275 aa14.99□□□□□ -0.01
LRRC28-210ENST00000558879 Q96MF0 132 aa14.99□□□□□ -0.01
LRRC28-210ENST00000558879 SMR3AQ99954 134 aa14.99□□□□□ -0.01
LRRC28-210ENST00000558879 NAA11Q9BSU3 229 aaPredicted RBP14.99□□□□□ -0.01
LRRC28-210ENST00000558879 TRIM2Q9C040 744 aa14.99□□□□□ -0.01
LRRC28-210ENST00000558879 CXorf56Q9H5V9 222 aa14.99□□□□□ -0.01
LRRC28-210ENST00000558879 VIPAS39Q9H9C1 493 aa14.99□□□□□ -0.01
LRRC28-210ENST00000558879 TAS2R16Q9NYV7 291 aa14.99□□□□□ -0.01
LRRC28-210ENST00000558879 SLAMF8Q9P0V8 285 aa14.99□□□□□ -0.01
LRRC28-210ENST00000558879 ARFGEF3Q5TH69 2177 aa14.99□□□□□ -0.01
LRRC28-210ENST00000558879 A8MVM7 634 aa14.98□□□□□ -0.01
LRRC28-210ENST00000558879 OVOL3O00110 214 aa14.98□□□□□ -0.01
LRRC28-210ENST00000558879 MRPL33O75394 65 aaKnown RBP14.98□□□□□ -0.01
LRRC28-210ENST00000558879 GPIP06744 558 aa14.98□□□□□ -0.01
LRRC28-210ENST00000558879 ETS2P15036 469 aa14.98□□□□□ -0.01
LRRC28-210ENST00000558879 CXCR1P25024 350 aa14.98□□□□□ -0.01
LRRC28-210ENST00000558879 FOXG1P55316 489 aaPredicted RBP14.98□□□□□ -0.01
LRRC28-210ENST00000558879 COPZ1P61923 177 aa14.98□□□□□ -0.01
LRRC28-210ENST00000558879 CAPRIN1Q14444 709 aaKnown RBP14.98□□□□□ -0.01
LRRC28-210ENST00000558879 SQLEQ14534 574 aa14.98□□□□□ -0.01
LRRC28-210ENST00000558879 ZNF672Q499Z4 452 aaPredicted RBP14.98□□□□□ -0.01
LRRC28-210ENST00000558879 ZNF311Q5JNZ3 666 aa14.98□□□□□ -0.01
LRRC28-210ENST00000558879 OTUD3Q5T2D3 398 aaPredicted RBP14.98□□□□□ -0.01
LRRC28-210ENST00000558879 ALKBH2Q6NS38 261 aa14.98□□□□□ -0.01
LRRC28-210ENST00000558879 C6orf89Q6UWU4 347 aa14.98□□□□□ -0.01
LRRC28-210ENST00000558879 CASP12Q6UXS9 341 aa14.98□□□□□ -0.01
LRRC28-210ENST00000558879 CADM2Q8N3J6 435 aa14.98□□□□□ -0.01
LRRC28-210ENST00000558879 DYDC1Q8WWB3 177 aa14.98□□□□□ -0.01
LRRC28-210ENST00000558879 CKAP2Q8WWK9 683 aa14.98□□□□□ -0.01
LRRC28-210ENST00000558879 NEUROG1Q92886 237 aa14.98□□□□□ -0.01
LRRC28-210ENST00000558879 SF3B5Q9BWJ5 86 aaKnown RBP14.98□□□□□ -0.01
LRRC28-210ENST00000558879 IKZF5Q9H5V7 419 aa14.98□□□□□ -0.01
LRRC28-210ENST00000558879 PIF1Q9H611 641 aa14.98□□□□□ -0.01
LRRC28-210ENST00000558879 ZNF385DQ9H6B1 395 aa14.98□□□□□ -0.01
LRRC28-210ENST00000558879 INTS9Q9NV88 658 aaKnown RBP14.98□□□□□ -0.01
LRRC28-210ENST00000558879 ASB6Q9NWX5 421 aa14.98□□□□□ -0.01
LRRC28-210ENST00000558879 SLC25A15Q9Y619 301 aa14.98□□□□□ -0.01
LRRC28-210ENST00000558879 ZANQ9Y493 2812 aa14.98□□□□□ -0.01
LRRC28-210ENST00000558879 FN1P02751 2386 aaKnown RBP14.98□□□□□ -0.01
LRRC28-210ENST00000558879 TLN2Q9Y4G6 2542 aa14.98□□□□□ -0.01
LRRC28-210ENST00000558879 NIPBLQ6KC79 2804 aaeCLIP14.97□□□□□ -0.01
LRRC28-210ENST00000558879 SHISA9B4DS77 424 aa14.97□□□□□ -0.01
LRRC28-210ENST00000558879 CLOCKO15516 846 aa14.97□□□□□ -0.01
LRRC28-210ENST00000558879 SOD3P08294 240 aa14.97□□□□□ -0.01
LRRC28-210ENST00000558879 PPIBP23284 216 aaKnown RBP14.97□□□□□ -0.01
LRRC28-210ENST00000558879 PRKAR1BP31321 381 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms