RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 EMC3Q9P0I2 261 aa11.89□□□□□ -0.51
VPS18-203ENST00000558855 SPIN1Q9Y657 262 aaPredicted RBP11.89□□□□□ -0.51
VPS18-203ENST00000558855 IGHV4-30-2A0A087WSY4 118 aa11.88□□□□□ -0.51
VPS18-203ENST00000558855 CFAP73A6NFT4 308 aa11.88□□□□□ -0.51
VPS18-203ENST00000558855 LIPT2A6NK58 231 aa11.88□□□□□ -0.51
VPS18-203ENST00000558855 CCT8L1PA6NM43 557 aa11.88□□□□□ -0.51
VPS18-203ENST00000558855 M0R1B8 84 aa11.88□□□□□ -0.51
VPS18-203ENST00000558855 FAAHO00519 579 aa11.88□□□□□ -0.51
VPS18-203ENST00000558855 DNPH1O43598 174 aa11.88□□□□□ -0.51
VPS18-203ENST00000558855 GPRIN2O60269 458 aa11.88□□□□□ -0.51
VPS18-203ENST00000558855 TMCC2O75069 709 aa11.88□□□□□ -0.51
VPS18-203ENST00000558855 TFPTP0C1Z6 253 aa11.88□□□□□ -0.51
VPS18-203ENST00000558855 CD40P25942 277 aa11.88□□□□□ -0.51
VPS18-203ENST00000558855 SLC1A3P43003 542 aa11.88□□□□□ -0.51
VPS18-203ENST00000558855 MAGOHP61326 146 aaKnown RBP11.88□□□□□ -0.51
VPS18-203ENST00000558855 CEACAM7Q14002 265 aa11.88□□□□□ -0.51
VPS18-203ENST00000558855 NXNQ6DKJ4 435 aa11.88□□□□□ -0.51
VPS18-203ENST00000558855 SLC2A7Q6PXP3 512 aa11.88□□□□□ -0.51
VPS18-203ENST00000558855 SERPINA11Q86U17 422 aa11.88□□□□□ -0.51
VPS18-203ENST00000558855 MSRB3Q8IXL7 192 aa11.88□□□□□ -0.51
VPS18-203ENST00000558855 CMIPQ8IY22 773 aa11.88□□□□□ -0.51
VPS18-203ENST00000558855 OR52P1PQ8NH57 321 aa11.88□□□□□ -0.51
VPS18-203ENST00000558855 SLC38A5Q8WUX1 472 aa11.88□□□□□ -0.51
VPS18-203ENST00000558855 ARL8AQ96BM9 186 aa11.88□□□□□ -0.51
VPS18-203ENST00000558855 TMEM19Q96HH6 336 aa11.88□□□□□ -0.51
VPS18-203ENST00000558855 MUS81Q96NY9 551 aa11.88□□□□□ -0.51
VPS18-203ENST00000558855 CACNG6Q9BXT2 260 aa11.88□□□□□ -0.51
VPS18-203ENST00000558855 PAIP1Q9H074 479 aaKnown RBP11.88□□□□□ -0.51
VPS18-203ENST00000558855 NGBQ9NPG2 151 aa11.88□□□□□ -0.51
VPS18-203ENST00000558855 THAP1Q9NVV9 213 aa11.88□□□□□ -0.51
VPS18-203ENST00000558855 ASB6Q9NWX5 421 aa11.88□□□□□ -0.51
VPS18-203ENST00000558855 TAS2R16Q9NYV7 291 aa11.88□□□□□ -0.51
VPS18-203ENST00000558855 SEC14L4Q9UDX3 406 aa11.88□□□□□ -0.51
VPS18-203ENST00000558855 TRAPPC4Q9Y296 219 aa11.88□□□□□ -0.51
VPS18-203ENST00000558855 ZNF443Q9Y2A4 671 aaPredicted RBP11.88□□□□□ -0.51
VPS18-203ENST00000558855 CIB4A0PJX0 185 aa11.87□□□□□ -0.51
VPS18-203ENST00000558855 TMEM229AB2RXF0 380 aa11.87□□□□□ -0.51
VPS18-203ENST00000558855 RFXANKO14593 260 aa11.87□□□□□ -0.51
VPS18-203ENST00000558855 ZNF208O43345 1280 aa11.87□□□□□ -0.51
VPS18-203ENST00000558855 SSX4O60224 188 aa11.87□□□□□ -0.51
VPS18-203ENST00000558855 MRPL33O75394 65 aaKnown RBP11.87□□□□□ -0.51
VPS18-203ENST00000558855 SLC22A3O75751 556 aa11.87□□□□□ -0.51
VPS18-203ENST00000558855 LY6HO94772 140 aa11.87□□□□□ -0.51
VPS18-203ENST00000558855 DBIP07108 87 aaKnown RBP11.87□□□□□ -0.51
VPS18-203ENST00000558855 IL7RP16871 459 aa11.87□□□□□ -0.51
VPS18-203ENST00000558855 CLK1P49759 484 aaKnown RBP11.87□□□□□ -0.51
VPS18-203ENST00000558855 DSTNP60981 165 aa11.87□□□□□ -0.51
VPS18-203ENST00000558855 OR7A5Q15622 319 aa11.87□□□□□ -0.51
VPS18-203ENST00000558855 OTUD3Q5T2D3 398 aaPredicted RBP11.87□□□□□ -0.51
VPS18-203ENST00000558855 CADM2Q8N3J6 435 aa11.87□□□□□ -0.51
VPS18-203ENST00000558855 MAL2Q969L2 176 aa11.87□□□□□ -0.51
VPS18-203ENST00000558855 MUCL1Q96DR8 90 aa11.87□□□□□ -0.51
VPS18-203ENST00000558855 ZHX1-C8orf76Q96EF9 292 aa11.87□□□□□ -0.51
VPS18-203ENST00000558855 MTHFD2LQ9H903 347 aaPredicted RBP11.87□□□□□ -0.51
VPS18-203ENST00000558855 SEC61A2Q9H9S3 476 aa11.87□□□□□ -0.51
VPS18-203ENST00000558855 TPT1P8Q9HAU6 139 aa11.87□□□□□ -0.51
VPS18-203ENST00000558855 TMBIM4Q9HC24 238 aa11.87□□□□□ -0.51
VPS18-203ENST00000558855 SLC17A5Q9NRA2 495 aa11.87□□□□□ -0.51
VPS18-203ENST00000558855 SDR39U1Q9NRG7 319 aaPredicted RBP11.87□□□□□ -0.51
VPS18-203ENST00000558855 RTTNQ86VV8 2226 aa11.86□□□□□ -0.51
VPS18-203ENST00000558855 AQP7P3A6NL99 342 aa11.86□□□□□ -0.51
VPS18-203ENST00000558855 GPR171O14626 319 aa11.86□□□□□ -0.51
VPS18-203ENST00000558855 NPIPB7O75200 414 aa11.86□□□□□ -0.51
VPS18-203ENST00000558855 ZCCHC18P0CG32 403 aa11.86□□□□□ -0.51
VPS18-203ENST00000558855 IDUAP35475 653 aa11.86□□□□□ -0.51
VPS18-203ENST00000558855 CRATP43155 626 aa11.86□□□□□ -0.51
VPS18-203ENST00000558855 MAGEA8P43361 318 aa11.86□□□□□ -0.51
VPS18-203ENST00000558855 SLC35A1P78382 337 aa11.86□□□□□ -0.51
VPS18-203ENST00000558855 EGR4Q05215 589 aa11.86□□□□□ -0.51
VPS18-203ENST00000558855 HIKESHIQ53FT3 197 aa11.86□□□□□ -0.51
VPS18-203ENST00000558855 PAQR6Q6TCH4 344 aa11.86□□□□□ -0.51
VPS18-203ENST00000558855 P2RY8Q86VZ1 359 aa11.86□□□□□ -0.51
VPS18-203ENST00000558855 FUNDC1Q8IVP5 155 aa11.86□□□□□ -0.51
VPS18-203ENST00000558855 WDFY1Q8IWB7 410 aa11.86□□□□□ -0.51
VPS18-203ENST00000558855 TRIML2Q8N7C3 387 aa11.86□□□□□ -0.51
VPS18-203ENST00000558855 OR9K2Q8NGE7 335 aa11.86□□□□□ -0.51
VPS18-203ENST00000558855 GTF2H4Q92759 462 aa11.86□□□□□ -0.51
VPS18-203ENST00000558855 C3orf49Q96BT1 292 aa11.86□□□□□ -0.51
VPS18-203ENST00000558855 DDIT4LQ96D03 193 aa11.86□□□□□ -0.51
VPS18-203ENST00000558855 TRMT61AQ96FX7 289 aaKnown RBP11.86□□□□□ -0.51
VPS18-203ENST00000558855 USB1Q9BQ65 265 aaKnown RBP11.86□□□□□ -0.51
VPS18-203ENST00000558855 EBF4Q9BQW3 602 aa11.86□□□□□ -0.51
VPS18-203ENST00000558855 PTDSS2Q9BVG9 487 aa11.86□□□□□ -0.51
VPS18-203ENST00000558855 NELFAQ9H3P2 528 aa11.86□□□□□ -0.51
VPS18-203ENST00000558855 SLC25A37Q9NYZ2 338 aa11.86□□□□□ -0.51
VPS18-203ENST00000558855 SLAMF8Q9P0V8 285 aa11.86□□□□□ -0.51
VPS18-203ENST00000558855 P2RX2Q9UBL9 471 aa11.86□□□□□ -0.51
VPS18-203ENST00000558855 TRPC5OSA6NMA1 111 aa11.85□□□□□ -0.51
VPS18-203ENST00000558855 FTCDNL1E5RQL4 147 aa11.85□□□□□ -0.51
VPS18-203ENST00000558855 ATP6V1G2-DDX39BF2Z307 99 aa11.85□□□□□ -0.51
VPS18-203ENST00000558855 CRLF1O75462 422 aa11.85□□□□□ -0.51
VPS18-203ENST00000558855 KRT75O95678 551 aa11.85□□□□□ -0.51
VPS18-203ENST00000558855 IDO1P14902 403 aa11.85□□□□□ -0.51
VPS18-203ENST00000558855 CDH2P19022 906 aaPredicted RBP11.85□□□□□ -0.51
VPS18-203ENST00000558855 TTKP33981 857 aa11.85□□□□□ -0.51
VPS18-203ENST00000558855 HTR3AP46098 478 aa11.85□□□□□ -0.51
VPS18-203ENST00000558855 SELENOPP49908 381 aa11.85□□□□□ -0.51
VPS18-203ENST00000558855 POLR2JP52435 117 aaKnown RBP11.85□□□□□ -0.51
VPS18-203ENST00000558855 TUBA1BP68363 451 aa11.85□□□□□ -0.51
VPS18-203ENST00000558855 TUBA4AP68366 448 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms