RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 LTB4RQ15722 352 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 C2orf68Q2NKX9 166 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 C9orf64Q5T6V5 341 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 DCAF12L2Q5VW00 463 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 KHDRBS2Q5VWX1 349 aaKnown RBP4.68□□□□□ -1.66
HMG20A-204ENST00000558288 OR7E24Q6IFN5 339 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 FUT10Q6P4F1 479 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 Q6ZVU0 165 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 TAS1R1Q7RTX1 841 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 MRGPREQ86SM8 312 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 FAM98AQ8NCA5 519 aaKnown RBP4.68□□□□□ -1.66
HMG20A-204ENST00000558288 CHST14Q8NCH0 376 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 SYNPRQ8TBG9 265 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 ACOT11Q8WXI4 607 aaPredicted RBP4.68□□□□□ -1.66
HMG20A-204ENST00000558288 SMPDL3BQ92485 455 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 PNPLA2Q96AD5 504 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 RAD51AP1Q96B01 352 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 S100A16Q96FQ6 103 aaKnown RBP4.68□□□□□ -1.66
HMG20A-204ENST00000558288 SLC41A3Q96GZ6 507 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 LRIG1Q96JA1 1093 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 SLC22A12Q96S37 553 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 KLF16Q9BXK1 252 aaPredicted RBP4.68□□□□□ -1.66
HMG20A-204ENST00000558288 TMPRSS13Q9BYE2 586 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 OR52D1Q9H346 318 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 EXOSC3Q9NQT5 275 aaKnown RBP4.68□□□□□ -1.66
HMG20A-204ENST00000558288 MED17Q9NVC6 651 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 IL20Q9NYY1 176 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 SLC7A7Q9UM01 511 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 KLF2Q9Y5W3 355 aaPredicted RBP4.68□□□□□ -1.66
HMG20A-204ENST00000558288 CACNA1IQ9P0X4 2223 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 PLXND1Q9Y4D7 1925 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 TRBV2A0A0J9YWF9 115 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 SLC22A31A6NKX4 558 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 HMSDA8MTL9 139 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 GABARAPH6UMI1 98 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 H7C4K7 107 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 HYAL3O43820 417 aaPredicted RBP4.68□□□□□ -1.66
HMG20A-204ENST00000558288 EDNRAP25101 427 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 MAT1AQ00266 395 aaKnown RBP4.68□□□□□ -1.66
HMG20A-204ENST00000558288 TMEM115Q12893 351 aaPredicted RBP4.68□□□□□ -1.66
HMG20A-204ENST00000558288 RPE65Q16518 533 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 ZNF750Q32MQ0 723 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 PCGF3Q3KNV8 242 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 RAB12Q6IQ22 244 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 ZCCHC12Q6PEW1 402 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 SLC16A13Q7RTY0 426 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 ZNF546Q86UE3 836 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 LURAP1LQ8IV03 231 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 CCDC116Q8IYX3 515 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 SVBPQ8N300 66 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 OR51L1Q8NGJ5 315 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 OR9A1PQ8NGU1 263 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 THAP6Q8TBB0 222 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 SNX33Q8WV41 574 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 ALG14Q96F25 216 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 LCORQ96JN0 433 aaPredicted RBP4.68□□□□□ -1.66
HMG20A-204ENST00000558288 LYSMD1Q96S90 227 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 PDCD1LG2Q9BQ51 273 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 SLC25A32Q9H2D1 315 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 GLIPR2Q9H4G4 154 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 COA4Q9NYJ1 87 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 TAC3Q9UHF0 121 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 GNG8Q9UK08 70 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 CDV3Q9UKY7 258 aaKnown RBP4.68□□□□□ -1.66
HMG20A-204ENST00000558288 KCNE3Q9Y6H6 103 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 DOCK6Q96HP0 2047 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 ANKRD11Q6UB99 2663 aaPredicted RBP4.68□□□□□ -1.66
HMG20A-204ENST00000558288 DCDC2BA2VCK2 349 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 OR14I1A6ND48 311 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 MEIS3P1A6NDR6 274 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 UNC119BA6NIH7 251 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 ACOD1A6NK06 481 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 RIIAD1A6NNX1 92 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 SNRPGP15A8MWD9 76 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 NPC1O15118 1278 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 GALR2O43603 387 aaPredicted RBP4.68□□□□□ -1.66
HMG20A-204ENST00000558288 SSX5O60225 188 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 TMPRSS11DO60235 418 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 ADAM11O75078 769 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 OR2A4O95047 310 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 PAK4O96013 591 aaPredicted RBP4.68□□□□□ -1.66
HMG20A-204ENST00000558288 FABP1P07148 127 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 SPP1P10451 314 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 HOXC8P31273 242 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 FAUP35544 74 aaKnown RBP4.68□□□□□ -1.66
HMG20A-204ENST00000558288 PSMB10P40306 273 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 ADH7P40394 386 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 NAA10P41227 235 aaPredicted RBP4.68□□□□□ -1.66
HMG20A-204ENST00000558288 SSR2P43308 183 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 CLDN2P57739 230 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 POLR2LP62875 67 aaKnown RBP4.68□□□□□ -1.66
HMG20A-204ENST00000558288 BLOC1S1P78537 153 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 KRT33BQ14525 404 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 PAN3Q58A45 887 aaKnown RBP4.68□□□□□ -1.66
HMG20A-204ENST00000558288 ELFN2Q5R3F8 820 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 HENMT1Q5T8I9 393 aaKnown RBP4.68□□□□□ -1.66
HMG20A-204ENST00000558288 TXNDC8Q6A555 127 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 C22orf39Q6P5X5 142 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 GDF7Q7Z4P5 450 aa4.68□□□□□ -1.66
HMG20A-204ENST00000558288 TMED4Q7Z7H5 227 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms