RNA–Protein interactions for RNA: ENST00000558072.5

TPM1-209, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-209ENST00000558072 OMPP47874 163 aa11.2□□□□□ -0.62
TPM1-209ENST00000558072 GSSP48637 474 aa11.2□□□□□ -0.62
TPM1-209ENST00000558072 IST1P53990 364 aa11.2□□□□□ -0.62
TPM1-209ENST00000558072 SLC35A1P78382 337 aa11.2□□□□□ -0.62
TPM1-209ENST00000558072 KLRB1Q12918 225 aa11.2□□□□□ -0.62
TPM1-209ENST00000558072 SEC23BQ15437 767 aa11.2□□□□□ -0.62
TPM1-209ENST00000558072 NADK2Q4G0N4 442 aa11.2□□□□□ -0.62
TPM1-209ENST00000558072 POMZP3Q6PJE2 187 aa11.2□□□□□ -0.62
TPM1-209ENST00000558072 CHMP1BQ7LBR1 199 aa11.2□□□□□ -0.62
TPM1-209ENST00000558072 PRICKLE2Q7Z3G6 844 aa11.2□□□□□ -0.62
TPM1-209ENST00000558072 ZER1Q7Z7L7 766 aa11.2□□□□□ -0.62
TPM1-209ENST00000558072 OAFQ86UD1 273 aa11.2□□□□□ -0.62
TPM1-209ENST00000558072 TSPYL5Q86VY4 417 aaPredicted RBP11.2□□□□□ -0.62
TPM1-209ENST00000558072 EPHX4Q8IUS5 362 aa11.2□□□□□ -0.62
TPM1-209ENST00000558072 PM20D2Q8IYS1 436 aa11.2□□□□□ -0.62
TPM1-209ENST00000558072 OR52L1Q8NGH7 329 aa11.2□□□□□ -0.62
TPM1-209ENST00000558072 NEIL3Q8TAT5 605 aa11.2□□□□□ -0.62
TPM1-209ENST00000558072 POC1BQ8TC44 478 aa11.2□□□□□ -0.62
TPM1-209ENST00000558072 NAA11Q9BSU3 229 aaPredicted RBP11.2□□□□□ -0.62
TPM1-209ENST00000558072 SLC25A18Q9H1K4 315 aa11.2□□□□□ -0.62
TPM1-209ENST00000558072 BAIAP2Q9UQB8 552 aa11.2□□□□□ -0.62
TPM1-209ENST00000558072 RPH3AQ9Y2J0 694 aaPredicted RBP11.2□□□□□ -0.62
TPM1-209ENST00000558072 ZZEF1O43149 2961 aa11.19□□□□□ -0.62
TPM1-209ENST00000558072 USP24Q9UPU5 2620 aa11.19□□□□□ -0.62
TPM1-209ENST00000558072 MGAQ8IWI9 3026 aa11.19□□□□□ -0.62
TPM1-209ENST00000558072 OR14I1A6ND48 311 aa11.19□□□□□ -0.62
TPM1-209ENST00000558072 FAM166BA8MTA8 275 aa11.19□□□□□ -0.62
TPM1-209ENST00000558072 H0YAE9 185 aa11.19□□□□□ -0.62
TPM1-209ENST00000558072 M0R3G1 203 aa11.19□□□□□ -0.62
TPM1-209ENST00000558072 SOCS2O14508 198 aa11.19□□□□□ -0.62
TPM1-209ENST00000558072 VAMP5O95183 116 aa11.19□□□□□ -0.62
TPM1-209ENST00000558072 RFPL3SP0C7P2 107 aa11.19□□□□□ -0.62
TPM1-209ENST00000558072 FUT1P19526 365 aa11.19□□□□□ -0.62
TPM1-209ENST00000558072 PRKACGP22612 351 aa11.19□□□□□ -0.62
TPM1-209ENST00000558072 TCEA1P23193 301 aaKnown RBP11.19□□□□□ -0.62
TPM1-209ENST00000558072 MAGEA5P43359 124 aa11.19□□□□□ -0.62
TPM1-209ENST00000558072 GFRA1P56159 465 aa11.19□□□□□ -0.62
TPM1-209ENST00000558072 FOXD4Q12950 439 aaPredicted RBP11.19□□□□□ -0.62
TPM1-209ENST00000558072 PPP1R8Q12972 351 aaKnown RBP11.19□□□□□ -0.62
TPM1-209ENST00000558072 ZNF74Q16587 644 aa11.19□□□□□ -0.62
TPM1-209ENST00000558072 TMEM176BQ3YBM2 270 aaPredicted RBP11.19□□□□□ -0.62
TPM1-209ENST00000558072 ZBED5Q49AG3 693 aa11.19□□□□□ -0.62
TPM1-209ENST00000558072 WIPI1Q5MNZ9 446 aaPredicted RBP11.19□□□□□ -0.62
TPM1-209ENST00000558072 SLC6A19Q695T7 634 aa11.19□□□□□ -0.62
TPM1-209ENST00000558072 ARHGAP11AQ6P4F7 1023 aa11.19□□□□□ -0.62
TPM1-209ENST00000558072 TBPL2Q6SJ96 375 aa11.19□□□□□ -0.62
TPM1-209ENST00000558072 WDR88Q6ZMY6 472 aa11.19□□□□□ -0.62
TPM1-209ENST00000558072 TMPPEQ6ZT21 453 aa11.19□□□□□ -0.62
TPM1-209ENST00000558072 TMEM179BQ7Z7N9 219 aa11.19□□□□□ -0.62
TPM1-209ENST00000558072 YRDCQ86U90 279 aaKnown RBP11.19□□□□□ -0.62
TPM1-209ENST00000558072 GALNT4Q8N4A0 578 aa11.19□□□□□ -0.62
TPM1-209ENST00000558072 DHRSXQ8N5I4 330 aa11.19□□□□□ -0.62
TPM1-209ENST00000558072 ADPRHL1Q8NDY3 354 aa11.19□□□□□ -0.62
TPM1-209ENST00000558072 OR9Q2Q8NGE9 314 aa11.19□□□□□ -0.62
TPM1-209ENST00000558072 TEX47Q8TBZ9 253 aa11.19□□□□□ -0.62
TPM1-209ENST00000558072 ABTB1Q969K4 478 aaPredicted RBP11.19□□□□□ -0.62
TPM1-209ENST00000558072 GTPBP3Q969Y2 492 aaKnown RBP11.19□□□□□ -0.62
TPM1-209ENST00000558072 SARAFQ96BY9 339 aa11.19□□□□□ -0.62
TPM1-209ENST00000558072 KLHL15Q96M94 604 aa11.19□□□□□ -0.62
TPM1-209ENST00000558072 ZNF184Q99676 751 aaPredicted RBP11.19□□□□□ -0.62
TPM1-209ENST00000558072 ALKBH4Q9NXW9 302 aa11.19□□□□□ -0.62
TPM1-209ENST00000558072 RALYQ9UKM9 306 aaKnown RBP11.19□□□□□ -0.62
TPM1-209ENST00000558072 B3GALT5Q9Y2C3 310 aa11.19□□□□□ -0.62
TPM1-209ENST00000558072 LAMA5O15230 3695 aa11.19□□□□□ -0.62
TPM1-209ENST00000558072 ANKRD11Q6UB99 2663 aaPredicted RBP11.18□□□□□ -0.62
TPM1-209ENST00000558072 IGKV1D-42A0A075B6H8 117 aa11.18□□□□□ -0.62
TPM1-209ENST00000558072 A0A1B0GVC2 190 aa11.18□□□□□ -0.62
TPM1-209ENST00000558072 H3BML4 177 aa11.18□□□□□ -0.62
TPM1-209ENST00000558072 SULT2B1O00204 365 aa11.18□□□□□ -0.62
TPM1-209ENST00000558072 KPNA4O00629 521 aaPredicted RBP11.18□□□□□ -0.62
TPM1-209ENST00000558072 AQP7O14520 342 aa11.18□□□□□ -0.62
TPM1-209ENST00000558072 IDH3BO43837 385 aa11.18□□□□□ -0.62
TPM1-209ENST00000558072 WISP2O76076 250 aa11.18□□□□□ -0.62
TPM1-209ENST00000558072 CH25HO95992 272 aa11.18□□□□□ -0.62
TPM1-209ENST00000558072 CCNA2P20248 432 aa11.18□□□□□ -0.62
TPM1-209ENST00000558072 SLC6A6P31641 620 aa11.18□□□□□ -0.62
TPM1-209ENST00000558072 DAPP51397 102 aa11.18□□□□□ -0.62
TPM1-209ENST00000558072 B3GALT5-AS1P59052 145 aa11.18□□□□□ -0.62
TPM1-209ENST00000558072 RAC3P60763 192 aa11.18□□□□□ -0.62
TPM1-209ENST00000558072 IL1RL1Q01638 556 aa11.18□□□□□ -0.62
TPM1-209ENST00000558072 EGR4Q05215 589 aa11.18□□□□□ -0.62
TPM1-209ENST00000558072 IL18R1Q13478 541 aa11.18□□□□□ -0.62
TPM1-209ENST00000558072 PLEKHN1Q494U1 663 aaPredicted RBP11.18□□□□□ -0.62
TPM1-209ENST00000558072 PRR30Q53SZ7 412 aaPredicted RBP11.18□□□□□ -0.62
TPM1-209ENST00000558072 GTF2IRD2BQ6EKJ0 949 aa11.18□□□□□ -0.62
TPM1-209ENST00000558072 SMARCD3Q6STE5 483 aa11.18□□□□□ -0.62
TPM1-209ENST00000558072 IZUMO2Q6UXV1 221 aa11.18□□□□□ -0.62
TPM1-209ENST00000558072 TRILQ7L0X0 811 aa11.18□□□□□ -0.62
TPM1-209ENST00000558072 HDDC2Q7Z4H3 204 aa11.18□□□□□ -0.62
TPM1-209ENST00000558072 NANOGNBQ7Z5D8 188 aa11.18□□□□□ -0.62
TPM1-209ENST00000558072 GTF2IRD2Q86UP8 949 aa11.18□□□□□ -0.62
TPM1-209ENST00000558072 GHDCQ8N2G8 530 aa11.18□□□□□ -0.62
TPM1-209ENST00000558072 LSM14AQ8ND56 463 aaKnown RBP11.18□□□□□ -0.62
TPM1-209ENST00000558072 SETD9Q8NE22 299 aa11.18□□□□□ -0.62
TPM1-209ENST00000558072 OR5J2Q8NH18 312 aa11.18□□□□□ -0.62
TPM1-209ENST00000558072 NRG4Q8WWG1 115 aa11.18□□□□□ -0.62
TPM1-209ENST00000558072 CPNE4Q96A23 557 aaPredicted RBP11.18□□□□□ -0.62
TPM1-209ENST00000558072 MIB2Q96AX9 1013 aa11.18□□□□□ -0.62
TPM1-209ENST00000558072 FAM46AQ96IP4 442 aaKnown RBP11.18□□□□□ -0.62
TPM1-209ENST00000558072 OR5B2Q96R09 309 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms