RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 SP1P08047 785 aa13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 ASAH2BP0C7U1 165 aa13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 ZNF17P17021 662 aa13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 GABRB1P18505 474 aa13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 NME2P22392 152 aa13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 SLC6A6P31641 620 aa13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 ID4P47928 161 aa13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 RPS4XP62701 263 aaKnown RBP13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 FOXO1Q12778 655 aa13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 TOP3AQ13472 1001 aaPredicted RBP13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 FHL1Q13642 323 aa13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 KCTD21Q4G0X4 260 aa13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 RBM48Q5RL73 367 aaKnown RBP13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 C6orf141Q5SZD1 244 aa13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 FAM69AQ5T7M9 428 aa13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 C1QL3Q5VWW1 255 aa13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 SLC25A25Q6KCM7 469 aa13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 ACSM5Q6NUN0 579 aa13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 C3orf33Q6P1S2 294 aa13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 IGFL2Q6UWQ7 119 aa13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 THSD4Q6ZMP0 1018 aa13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 SULF2Q8IWU5 870 aa13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 SPACA3Q8IXA5 215 aa13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 OR2T33Q8NG76 320 aa13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 OR5M1Q8NGP8 315 aa13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 RHOXF1Q8NHV9 184 aa13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 DDIT4LQ96D03 193 aa13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 FAM122AQ96E09 287 aa13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 C5orf34Q96MH7 638 aa13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 SLC38A2Q96QD8 506 aa13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 TNFRSF13CQ96RJ3 184 aa13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 TEX12Q9BXU0 123 aa13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 YTHDF1Q9BYJ9 559 aaKnown RBP13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 UBQLN3Q9H347 655 aa13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 CCDC86Q9H6F5 360 aaKnown RBP13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 NANSQ9NR45 359 aa13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 RPH3AQ9Y2J0 694 aaPredicted RBP13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 HIF3AQ9Y2N7 669 aa13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 KLF13Q9Y2Y9 288 aaPredicted RBP13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 MPDZO75970 2070 aa13.08□□□□□ -0.32
ARHGEF40-208ENST00000557498 SLC1A7O00341 560 aa13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 BHLHE40O14503 412 aa13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 OR2T1O43869 369 aa13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 EFNA2O43921 213 aa13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 ZIC3O60481 467 aa13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 WBP4O75554 376 aaKnown RBP13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 NDUFB2O95178 105 aa13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 CD46P15529 392 aa13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 IL11P20809 199 aa13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 GRK5P34947 590 aa13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 PCYT1AP49585 367 aa13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 SNRPGP62308 76 aaKnown RBP13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 FOXK1P85037 733 aa13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 ANKDD1AQ495B1 522 aa13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 GLYR1Q49A26 553 aaPredicted RBP13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 RAET1LQ5VY80 246 aa13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 CCDC81Q6ZN84 652 aa13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 PTCHD4Q6ZW05 846 aa13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 NANOGNBQ7Z5D8 188 aa13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 CCDC103Q8IW40 242 aa13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 ATP6V1C2Q8NEY4 427 aa13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 SLC25A43Q8WUT9 341 aaPredicted RBP13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 TRUB1Q8WWH5 349 aaKnown RBP13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 ZNF566Q969W8 418 aa13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 SCMH1Q96GD3 660 aa13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 IFT27Q9BW83 186 aa13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 POLDIP3Q9BY77 421 aaKnown RBP13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 POTEKPQ9BYX7 375 aa13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 OR2B2Q9GZK3 357 aa13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 NDEL1Q9GZM8 345 aa13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 ENKD1Q9H0I2 346 aa13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 ADNPQ9H2P0 1102 aa13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 TVP23BQ9NYZ1 205 aa13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 AASSQ9UDR5 926 aa13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 IL20RAQ9UHF4 553 aa13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 BAIAP2Q9UQB8 552 aa13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 MRPS18CQ9Y3D5 142 aaKnown RBP13.07□□□□□ -0.32
ARHGEF40-208ENST00000557498 WDFY3Q8IZQ1 3526 aa13.06□□□□□ -0.32
ARHGEF40-208ENST00000557498 EIF4E1BA6NMX2 242 aaKnown RBP13.06□□□□□ -0.32
ARHGEF40-208ENST00000557498 FTCDNL1E5RQL4 147 aa13.06□□□□□ -0.32
ARHGEF40-208ENST00000557498 PRKYO43930 277 aa13.06□□□□□ -0.32
ARHGEF40-208ENST00000557498 PPP1R3DO95685 299 aa13.06□□□□□ -0.32
ARHGEF40-208ENST00000557498 HIST1H2ABP04908 130 aa13.06□□□□□ -0.32
ARHGEF40-208ENST00000557498 HMGN1P05114 100 aa13.06□□□□□ -0.32
ARHGEF40-208ENST00000557498 ADRB1P08588 477 aa13.06□□□□□ -0.32
ARHGEF40-208ENST00000557498 CCDC159P0C7I6 412 aa13.06□□□□□ -0.32
ARHGEF40-208ENST00000557498 RFPL3SP0C7P2 107 aa13.06□□□□□ -0.32
ARHGEF40-208ENST00000557498 TFPIP10646 304 aa13.06□□□□□ -0.32
ARHGEF40-208ENST00000557498 FKBP2P26885 142 aaKnown RBP13.06□□□□□ -0.32
ARHGEF40-208ENST00000557498 FMO3P31513 532 aa13.06□□□□□ -0.32
ARHGEF40-208ENST00000557498 IDUAP35475 653 aa13.06□□□□□ -0.32
ARHGEF40-208ENST00000557498 EIF2S3P41091 472 aaKnown RBP13.06□□□□□ -0.32
ARHGEF40-208ENST00000557498 PRPS1P60891 318 aa13.06□□□□□ -0.32
ARHGEF40-208ENST00000557498 CXCR4P61073 352 aa13.06□□□□□ -0.32
ARHGEF40-208ENST00000557498 SNAPC1Q16533 368 aa13.06□□□□□ -0.32
ARHGEF40-208ENST00000557498 GXYLT1Q4G148 440 aa13.06□□□□□ -0.32
ARHGEF40-208ENST00000557498 SYT14P1Q58G82 188 aa13.06□□□□□ -0.32
ARHGEF40-208ENST00000557498 HIST3H2AQ7L7L0 130 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms