RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 ARHGDIGQ99819 225 aa11.12□□□□□ -0.63
SLIRP-209ENST00000557342 GPATCH1Q9BRR8 931 aaKnown RBP11.12□□□□□ -0.63
SLIRP-209ENST00000557342 RSPO3Q9BXY4 272 aaPredicted RBP11.12□□□□□ -0.63
SLIRP-209ENST00000557342 C12orf49Q9H741 205 aa11.12□□□□□ -0.63
SLIRP-209ENST00000557342 CRIM1Q9NZV1 1036 aa11.12□□□□□ -0.63
SLIRP-209ENST00000557342 BAG5Q9UL15 447 aa11.12□□□□□ -0.63
SLIRP-209ENST00000557342 IGKV3D-15A0A087WSY6 115 aa11.11□□□□□ -0.63
SLIRP-209ENST00000557342 A0A1B0GWA3 101 aa11.11□□□□□ -0.63
SLIRP-209ENST00000557342 ELOVL7A1L3X0 281 aa11.11□□□□□ -0.63
SLIRP-209ENST00000557342 SH3D21A4FU49 640 aa11.11□□□□□ -0.63
SLIRP-209ENST00000557342 TMEM229AB2RXF0 380 aa11.11□□□□□ -0.63
SLIRP-209ENST00000557342 C16orf97H3BN30 126 aa11.11□□□□□ -0.63
SLIRP-209ENST00000557342 GPR171O14626 319 aa11.11□□□□□ -0.63
SLIRP-209ENST00000557342 FMO6PO60774 539 aa11.11□□□□□ -0.63
SLIRP-209ENST00000557342 AHSA1O95433 338 aa11.11□□□□□ -0.63
SLIRP-209ENST00000557342 HTR2AP28223 471 aa11.11□□□□□ -0.63
SLIRP-209ENST00000557342 H3F3AP84243 136 aa11.11□□□□□ -0.63
SLIRP-209ENST00000557342 FAM27E3Q08E93 113 aa11.11□□□□□ -0.63
SLIRP-209ENST00000557342 BNIP2Q12982 314 aa11.11□□□□□ -0.63
SLIRP-209ENST00000557342 CEACAM7Q14002 265 aa11.11□□□□□ -0.63
SLIRP-209ENST00000557342 OR1Q1Q15612 314 aa11.11□□□□□ -0.63
SLIRP-209ENST00000557342 OR7A5Q15622 319 aa11.11□□□□□ -0.63
SLIRP-209ENST00000557342 NRF1Q16656 503 aa11.11□□□□□ -0.63
SLIRP-209ENST00000557342 EXOC3L2Q2M3D2 409 aa11.11□□□□□ -0.63
SLIRP-209ENST00000557342 C1orf140Q5VVS0 124 aa11.11□□□□□ -0.63
SLIRP-209ENST00000557342 ZNF613Q6PF04 617 aa11.11□□□□□ -0.63
SLIRP-209ENST00000557342 GALNT5Q7Z7M9 940 aa11.11□□□□□ -0.63
SLIRP-209ENST00000557342 MICU2Q8IYU8 434 aa11.11□□□□□ -0.63
SLIRP-209ENST00000557342 GPR32P1Q8NGA4 272 aa11.11□□□□□ -0.63
SLIRP-209ENST00000557342 LINC01560Q8TB33 94 aa11.11□□□□□ -0.63
SLIRP-209ENST00000557342 PROX1Q92786 737 aa11.11□□□□□ -0.63
SLIRP-209ENST00000557342 SLC38A4Q969I6 547 aa11.11□□□□□ -0.63
SLIRP-209ENST00000557342 TAMM41Q96BW9 452 aa11.11□□□□□ -0.63
SLIRP-209ENST00000557342 DNAJA3Q96EY1 480 aa11.11□□□□□ -0.63
SLIRP-209ENST00000557342 LRRC37BQ96QE4 947 aa11.11□□□□□ -0.63
SLIRP-209ENST00000557342 MCHR1Q99705 422 aa11.11□□□□□ -0.63
SLIRP-209ENST00000557342 SLC9A8Q9Y2E8 581 aa11.11□□□□□ -0.63
SLIRP-209ENST00000557342 FREM1Q5H8C1 2179 aa11.1□□□□□ -0.63
SLIRP-209ENST00000557342 A0A0B4J2E0 115 aa11.1□□□□□ -0.63
SLIRP-209ENST00000557342 A0A1B0GX12 115 aa11.1□□□□□ -0.63
SLIRP-209ENST00000557342 LIPT2A6NK58 231 aa11.1□□□□□ -0.63
SLIRP-209ENST00000557342 CCT8L1PA6NM43 557 aa11.1□□□□□ -0.63
SLIRP-209ENST00000557342 M0R3H8 397 aa11.1□□□□□ -0.63
SLIRP-209ENST00000557342 CASKO14936 926 aa11.1□□□□□ -0.63
SLIRP-209ENST00000557342 OR2T1O43869 369 aa11.1□□□□□ -0.63
SLIRP-209ENST00000557342 NPIPB7O75200 414 aa11.1□□□□□ -0.63
SLIRP-209ENST00000557342 FAM107AO95990 144 aa11.1□□□□□ -0.63
SLIRP-209ENST00000557342 PPP3CBP16298 524 aa11.1□□□□□ -0.63
SLIRP-209ENST00000557342 CD247P20963 164 aa11.1□□□□□ -0.63
SLIRP-209ENST00000557342 GTF2E2P29084 291 aaKnown RBP11.1□□□□□ -0.63
SLIRP-209ENST00000557342 UGT2B10P36537 528 aa11.1□□□□□ -0.63
SLIRP-209ENST00000557342 SLC16A1P53985 500 aa11.1□□□□□ -0.63
SLIRP-209ENST00000557342 GABPB1Q06547 395 aaPredicted RBP11.1□□□□□ -0.63
SLIRP-209ENST00000557342 DAZAP2Q15038 168 aaPredicted RBP11.1□□□□□ -0.63
SLIRP-209ENST00000557342 OTUD3Q5T2D3 398 aaPredicted RBP11.1□□□□□ -0.63
SLIRP-209ENST00000557342 SWT1Q5T5J6 900 aaKnown RBP11.1□□□□□ -0.63
SLIRP-209ENST00000557342 C8orf82Q6P1X6 216 aaPredicted RBP11.1□□□□□ -0.63
SLIRP-209ENST00000557342 TFAP2EQ6VUC0 442 aa11.1□□□□□ -0.63
SLIRP-209ENST00000557342 NUFIP2Q7Z417 695 aaKnown RBP11.1□□□□□ -0.63
SLIRP-209ENST00000557342 TMEM200AQ86VY9 491 aa11.1□□□□□ -0.63
SLIRP-209ENST00000557342 SLC15A3Q8IY34 581 aa11.1□□□□□ -0.63
SLIRP-209ENST00000557342 ANKS4BQ8N8V4 417 aa11.1□□□□□ -0.63
SLIRP-209ENST00000557342 MFSD8Q8NHS3 518 aa11.1□□□□□ -0.63
SLIRP-209ENST00000557342 RNF217Q8TC41 542 aa11.1□□□□□ -0.63
SLIRP-209ENST00000557342 ZNF300Q96RE9 604 aaPredicted RBP11.1□□□□□ -0.63
SLIRP-209ENST00000557342 CCT8L2Q96SF2 557 aa11.1□□□□□ -0.63
SLIRP-209ENST00000557342 EPYCQ99645 322 aa11.1□□□□□ -0.63
SLIRP-209ENST00000557342 HDHD5Q9BXW7 423 aa11.1□□□□□ -0.63
SLIRP-209ENST00000557342 KLHL4Q9C0H6 718 aa11.1□□□□□ -0.63
SLIRP-209ENST00000557342 OR10A4Q9H209 315 aa11.1□□□□□ -0.63
SLIRP-209ENST00000557342 CMTM6Q9NX76 183 aa11.1□□□□□ -0.63
SLIRP-209ENST00000557342 ING1Q9UK53 422 aaPredicted RBP11.1□□□□□ -0.63
SLIRP-209ENST00000557342 NOSIPQ9Y314 301 aaKnown RBP11.1□□□□□ -0.63
SLIRP-209ENST00000557342 A0A087WUJ7 227 aa11.09□□□□□ -0.63
SLIRP-209ENST00000557342 A6NNC1 897 aa11.09□□□□□ -0.63
SLIRP-209ENST00000557342 ZNF716A6NP11 495 aa11.09□□□□□ -0.63
SLIRP-209ENST00000557342 GSTA4O15217 222 aa11.09□□□□□ -0.63
SLIRP-209ENST00000557342 TPST2O60704 377 aa11.09□□□□□ -0.63
SLIRP-209ENST00000557342 VAMP5O95183 116 aa11.09□□□□□ -0.63
SLIRP-209ENST00000557342 CNOT4O95628 575 aaKnown RBP11.09□□□□□ -0.63
SLIRP-209ENST00000557342 KLK2P20151 261 aa11.09□□□□□ -0.63
SLIRP-209ENST00000557342 KDELR2P33947 212 aa11.09□□□□□ -0.63
SLIRP-209ENST00000557342 OR3A2P47893 321 aa11.09□□□□□ -0.63
SLIRP-209ENST00000557342 SLC7A2P52569 658 aa11.09□□□□□ -0.63
SLIRP-209ENST00000557342 LIPEQ05469 1076 aa11.09□□□□□ -0.63
SLIRP-209ENST00000557342 GKAP1Q5VSY0 366 aaPredicted RBP11.09□□□□□ -0.63
SLIRP-209ENST00000557342 TMEM225Q6GV28 225 aa11.09□□□□□ -0.63
SLIRP-209ENST00000557342 CCDC103Q8IW40 242 aa11.09□□□□□ -0.63
SLIRP-209ENST00000557342 ZNF100Q8IYN0 542 aa11.09□□□□□ -0.63
SLIRP-209ENST00000557342 OR6T1Q8NGN1 323 aa11.09□□□□□ -0.63
SLIRP-209ENST00000557342 VANGL1Q8TAA9 524 aaPredicted RBP11.09□□□□□ -0.63
SLIRP-209ENST00000557342 LURAP1Q96LR2 239 aa11.09□□□□□ -0.63
SLIRP-209ENST00000557342 SF3B5Q9BWJ5 86 aaKnown RBP11.09□□□□□ -0.63
SLIRP-209ENST00000557342 PRR14Q9BWN1 585 aa11.09□□□□□ -0.63
SLIRP-209ENST00000557342 ALG2Q9H553 416 aa11.09□□□□□ -0.63
SLIRP-209ENST00000557342 PARPBPQ9NWS1 579 aa11.09□□□□□ -0.63
SLIRP-209ENST00000557342 ADPRHL2Q9NX46 363 aa11.09□□□□□ -0.63
SLIRP-209ENST00000557342 ZNF226Q9NYT6 803 aa11.09□□□□□ -0.63
SLIRP-209ENST00000557342 USP22Q9UPT9 525 aa11.09□□□□□ -0.63
SLIRP-209ENST00000557342 GPR52Q9Y2T5 361 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms