RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 SLC38A4Q969I6 547 aa15.63■□□□□ 0.09
SHMT2-225ENST00000556798 CCDC124Q96CT7 223 aaKnown RBP15.63■□□□□ 0.09
SHMT2-225ENST00000556798 SLC7A6OSQ96CW6 309 aaPredicted RBP15.63■□□□□ 0.09
SHMT2-225ENST00000556798 ZFP3Q96NJ6 502 aa15.63■□□□□ 0.09
SHMT2-225ENST00000556798 GORASP2Q9H8Y8 452 aa15.63■□□□□ 0.09
SHMT2-225ENST00000556798 SLC7A7Q9UM01 511 aa15.63■□□□□ 0.09
SHMT2-225ENST00000556798 FREM1Q5H8C1 2179 aa15.62■□□□□ 0.09
SHMT2-225ENST00000556798 A0A087WUJ7 227 aa15.62■□□□□ 0.09
SHMT2-225ENST00000556798 A0A1W2PNV4 684 aa15.62■□□□□ 0.09
SHMT2-225ENST00000556798 TRAPPC13A5PLN9 417 aa15.62■□□□□ 0.09
SHMT2-225ENST00000556798 GYG2O15488 501 aa15.62■□□□□ 0.09
SHMT2-225ENST00000556798 CHP2O43745 196 aa15.62■□□□□ 0.09
SHMT2-225ENST00000556798 PLGP00747 810 aaPredicted RBP15.62■□□□□ 0.09
SHMT2-225ENST00000556798 ATP6V1B2P21281 511 aa15.62■□□□□ 0.09
SHMT2-225ENST00000556798 YAP1P46937 504 aaKnown RBP15.62■□□□□ 0.09
SHMT2-225ENST00000556798 OR7A5Q15622 319 aa15.62■□□□□ 0.09
SHMT2-225ENST00000556798 DNAL1Q4LDG9 190 aa15.62■□□□□ 0.09
SHMT2-225ENST00000556798 CYP2R1Q6VVX0 501 aa15.62■□□□□ 0.09
SHMT2-225ENST00000556798 WDR88Q6ZMY6 472 aa15.62■□□□□ 0.09
SHMT2-225ENST00000556798 LILRB4Q8NHJ6 448 aa15.62■□□□□ 0.09
SHMT2-225ENST00000556798 STK35Q8TDR2 534 aa15.62■□□□□ 0.09
SHMT2-225ENST00000556798 GEMIN6Q8WXD5 167 aaKnown RBP15.62■□□□□ 0.09
SHMT2-225ENST00000556798 KTI12Q96EK9 354 aaPredicted RBP15.62■□□□□ 0.09
SHMT2-225ENST00000556798 NSMCE2Q96MF7 247 aa15.62■□□□□ 0.09
SHMT2-225ENST00000556798 PSMG3-AS1Q96PY0 264 aa15.62■□□□□ 0.09
SHMT2-225ENST00000556798 POTEKPQ9BYX7 375 aa15.62■□□□□ 0.09
SHMT2-225ENST00000556798 AMBRA1Q9C0C7 1298 aa15.62■□□□□ 0.09
SHMT2-225ENST00000556798 DCAF13Q9NV06 445 aaKnown RBP15.62■□□□□ 0.09
SHMT2-225ENST00000556798 SAMD4AQ9UPU9 718 aaKnown RBP15.62■□□□□ 0.09
SHMT2-225ENST00000556798 LIPT2A6NK58 231 aa15.61■□□□□ 0.09
SHMT2-225ENST00000556798 ZNF814B7Z6K7 855 aa15.61■□□□□ 0.09
SHMT2-225ENST00000556798 J3KTA2 159 aa15.61■□□□□ 0.09
SHMT2-225ENST00000556798 DVL2O14641 736 aa15.61■□□□□ 0.09
SHMT2-225ENST00000556798 NPIPB7O75200 414 aa15.61■□□□□ 0.09
SHMT2-225ENST00000556798 TNFSF13O75888 250 aa15.61■□□□□ 0.09
SHMT2-225ENST00000556798 PRKD3O94806 890 aa15.61■□□□□ 0.09
SHMT2-225ENST00000556798 AHSA1O95433 338 aa15.61■□□□□ 0.09
SHMT2-225ENST00000556798 IFNW1P05000 195 aa15.61■□□□□ 0.09
SHMT2-225ENST00000556798 FPR1P21462 350 aa15.61■□□□□ 0.09
SHMT2-225ENST00000556798 OPRM1P35372 400 aa15.61■□□□□ 0.09
SHMT2-225ENST00000556798 RPS5P46782 204 aaKnown RBP15.61■□□□□ 0.09
SHMT2-225ENST00000556798 SLC35A1P78382 337 aa15.61■□□□□ 0.09
SHMT2-225ENST00000556798 PIN1Q13526 163 aaPredicted RBP15.61■□□□□ 0.09
SHMT2-225ENST00000556798 SWT1Q5T5J6 900 aaKnown RBP15.61■□□□□ 0.09
SHMT2-225ENST00000556798 VWA1Q6PCB0 445 aa15.61■□□□□ 0.09
SHMT2-225ENST00000556798 GDF7Q7Z4P5 450 aa15.61■□□□□ 0.09
SHMT2-225ENST00000556798 MCEMP1Q8IX19 187 aa15.61■□□□□ 0.09
SHMT2-225ENST00000556798 ZHX1-C8orf76Q96EF9 292 aa15.61■□□□□ 0.09
SHMT2-225ENST00000556798 SLC41A3Q96GZ6 507 aa15.61■□□□□ 0.09
SHMT2-225ENST00000556798 BTBD10Q9BSF8 475 aa15.61■□□□□ 0.09
SHMT2-225ENST00000556798 PTDSS2Q9BVG9 487 aa15.61■□□□□ 0.09
SHMT2-225ENST00000556798 SFXN3Q9BWM7 321 aa15.61■□□□□ 0.09
SHMT2-225ENST00000556798 ZNF629Q9UEG4 869 aaPredicted RBP15.61■□□□□ 0.09
SHMT2-225ENST00000556798 TRAPPC4Q9Y296 219 aa15.61■□□□□ 0.09
SHMT2-225ENST00000556798 EEF1E1-BLOC1S5C9J1V9 151 aa15.6■□□□□ 0.09
SHMT2-225ENST00000556798 PRSS44E7EML9 344 aa15.6■□□□□ 0.09
SHMT2-225ENST00000556798 EEF1E1O43324 174 aaKnown RBP15.6■□□□□ 0.09
SHMT2-225ENST00000556798 RAMP1O60894 148 aa15.6■□□□□ 0.09
SHMT2-225ENST00000556798 FUT4P22083 530 aa15.6■□□□□ 0.09
SHMT2-225ENST00000556798 GRNP28799 593 aaKnown RBP15.6■□□□□ 0.09
SHMT2-225ENST00000556798 KIR2DL2P43627 348 aaPredicted RBP15.6■□□□□ 0.09
SHMT2-225ENST00000556798 MS4A2Q01362 244 aa15.6■□□□□ 0.09
SHMT2-225ENST00000556798 GUSBP1Q15486 140 aa15.6■□□□□ 0.09
SHMT2-225ENST00000556798 CCDC103Q8IW40 242 aa15.6■□□□□ 0.09
SHMT2-225ENST00000556798 SLC25A36Q96CQ1 311 aa15.6■□□□□ 0.09
SHMT2-225ENST00000556798 GMPPAQ96IJ6 420 aaPredicted RBP15.6■□□□□ 0.09
SHMT2-225ENST00000556798 PRRC1Q96M27 445 aa15.6■□□□□ 0.09
SHMT2-225ENST00000556798 TAPBPLQ9BX59 468 aa15.6■□□□□ 0.09
SHMT2-225ENST00000556798 KLHL13Q9P2N7 655 aa15.6■□□□□ 0.09
SHMT2-225ENST00000556798 RHCGQ9UBD6 479 aa15.6■□□□□ 0.09
SHMT2-225ENST00000556798 RIMS3Q9UJD0 308 aa15.6■□□□□ 0.09
SHMT2-225ENST00000556798 A4GNTQ9UNA3 340 aa15.6■□□□□ 0.09
SHMT2-225ENST00000556798 C19orf84I3L1E1 186 aa15.59■□□□□ 0.09
SHMT2-225ENST00000556798 KPNA4O00629 521 aaPredicted RBP15.59■□□□□ 0.09
SHMT2-225ENST00000556798 CYTIPO60759 359 aa15.59■□□□□ 0.09
SHMT2-225ENST00000556798 SS18L1O75177 396 aaPredicted RBP15.59■□□□□ 0.09
SHMT2-225ENST00000556798 AKR7A3O95154 331 aa15.59■□□□□ 0.09
SHMT2-225ENST00000556798 OR5F1O95221 314 aa15.59■□□□□ 0.09
SHMT2-225ENST00000556798 IL18BPO95998 194 aa15.59■□□□□ 0.09
SHMT2-225ENST00000556798 GPIP06744 558 aa15.59■□□□□ 0.09
SHMT2-225ENST00000556798 CBLP22681 906 aa15.59■□□□□ 0.09
SHMT2-225ENST00000556798 AGTR1P30556 359 aa15.59■□□□□ 0.09
SHMT2-225ENST00000556798 CTBP2P56545 445 aa15.59■□□□□ 0.09
SHMT2-225ENST00000556798 RASGEF1BQ0VAM2 473 aa15.59■□□□□ 0.09
SHMT2-225ENST00000556798 RNPS1Q15287 305 aaKnown RBP15.59■□□□□ 0.09
SHMT2-225ENST00000556798 SLC25A35Q3KQZ1 300 aa15.59■□□□□ 0.09
SHMT2-225ENST00000556798 ABLIM2Q6H8Q1 611 aa15.59■□□□□ 0.09
SHMT2-225ENST00000556798 LINC00114Q6XXX2 140 aa15.59■□□□□ 0.09
SHMT2-225ENST00000556798 MAMDC2Q7Z304 686 aaPredicted RBP15.59■□□□□ 0.09
SHMT2-225ENST00000556798 BTLAQ7Z6A9 289 aa15.59■□□□□ 0.09
SHMT2-225ENST00000556798 TUSC5Q8IXB3 177 aa15.59■□□□□ 0.09
SHMT2-225ENST00000556798 TMEM99Q8N816 258 aa15.59■□□□□ 0.09
SHMT2-225ENST00000556798 TAAR8Q969N4 342 aa15.59■□□□□ 0.09
SHMT2-225ENST00000556798 STARD4Q96DR4 205 aa15.59■□□□□ 0.09
SHMT2-225ENST00000556798 ZNF300Q96RE9 604 aaPredicted RBP15.59■□□□□ 0.09
SHMT2-225ENST00000556798 PSD2Q9BQI7 771 aa15.59■□□□□ 0.09
SHMT2-225ENST00000556798 PRSS27Q9BQR3 290 aa15.59■□□□□ 0.09
SHMT2-225ENST00000556798 KCNJ16Q9NPI9 418 aa15.59■□□□□ 0.09
SHMT2-225ENST00000556798 ACTR3BQ9P1U1 418 aa15.59■□□□□ 0.09
SHMT2-225ENST00000556798 ING1Q9UK53 422 aaPredicted RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms