RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 MORN4Q8NDC4 146 aa16.02■□□□□ 0.16
PTPN21-208ENST00000556564 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.02■□□□□ 0.16
PTPN21-208ENST00000556564 ICOSLGO75144 302 aa16.02■□□□□ 0.16
PTPN21-208ENST00000556564 EVI2BP34910 448 aa16.02■□□□□ 0.16
PTPN21-208ENST00000556564 CDK10Q15131 360 aa16.02■□□□□ 0.16
PTPN21-208ENST00000556564 SLC35D2Q76EJ3 337 aa16.02■□□□□ 0.16
PTPN21-208ENST00000556564 RNF113BQ8IZP6 322 aaKnown RBP16.02■□□□□ 0.16
PTPN21-208ENST00000556564 PRRX2Q99811 253 aa16.02■□□□□ 0.16
PTPN21-208ENST00000556564 PAPOLGQ9BWT3 736 aaKnown RBP16.02■□□□□ 0.16
PTPN21-208ENST00000556564 COQ3Q9NZJ6 369 aa16.02■□□□□ 0.16
PTPN21-208ENST00000556564 CNOT11Q9UKZ1 510 aaKnown RBP16.02■□□□□ 0.16
PTPN21-208ENST00000556564 CXorf51AA0A1B0GTR3 108 aa16.02■□□□□ 0.16
PTPN21-208ENST00000556564 TMEM269A0A1B0GVZ9 245 aa16.02■□□□□ 0.16
PTPN21-208ENST00000556564 MKRN2OSH3BPM6 223 aa16.02■□□□□ 0.16
PTPN21-208ENST00000556564 MPIG6BO95866 241 aa16.02■□□□□ 0.16
PTPN21-208ENST00000556564 RAC2P15153 192 aa16.02■□□□□ 0.16
PTPN21-208ENST00000556564 P2RX1P51575 399 aa16.02■□□□□ 0.16
PTPN21-208ENST00000556564 CNN3Q15417 329 aaKnown RBP16.02■□□□□ 0.16
PTPN21-208ENST00000556564 PRSS48Q7RTY5 328 aa16.02■□□□□ 0.16
PTPN21-208ENST00000556564 CNOT9Q92600 299 aaKnown RBP16.02■□□□□ 0.16
PTPN21-208ENST00000556564 MENTQ9BUN1 341 aa16.02■□□□□ 0.16
PTPN21-208ENST00000556564 AK6Q9Y3D8 172 aaKnown RBP16.02■□□□□ 0.16
PTPN21-208ENST00000556564 PRRG2O14669 202 aa16.02■□□□□ 0.15
PTPN21-208ENST00000556564 NXPH1P58417 271 aa16.02■□□□□ 0.15
PTPN21-208ENST00000556564 PSPHP78330 225 aa16.02■□□□□ 0.15
PTPN21-208ENST00000556564 SF3A2Q15428 464 aaKnown RBP16.02■□□□□ 0.15
PTPN21-208ENST00000556564 PRICKLE2Q7Z3G6 844 aa16.02■□□□□ 0.15
PTPN21-208ENST00000556564 NAXDQ8IW45 347 aa16.02■□□□□ 0.15
PTPN21-208ENST00000556564 PFN4Q8NHR9 129 aa16.02■□□□□ 0.15
PTPN21-208ENST00000556564 SLC35A4Q96G79 324 aa16.02■□□□□ 0.15
PTPN21-208ENST00000556564 CTSFQ9UBX1 484 aa16.02■□□□□ 0.15
PTPN21-208ENST00000556564 DIRAS3O95661 229 aa16.02■□□□□ 0.15
PTPN21-208ENST00000556564 ZXDAP98168 799 aa16.02■□□□□ 0.15
PTPN21-208ENST00000556564 MZT1Q08AG7 82 aa16.02■□□□□ 0.15
PTPN21-208ENST00000556564 RUNX2Q13950 521 aa16.02■□□□□ 0.15
PTPN21-208ENST00000556564 PLGLAQ15195 96 aa16.02■□□□□ 0.15
PTPN21-208ENST00000556564 NDUFAF7Q7L592 441 aa16.02■□□□□ 0.15
PTPN21-208ENST00000556564 OR4F15Q8NGB8 312 aa16.02■□□□□ 0.15
PTPN21-208ENST00000556564 GPR148Q8TDV2 347 aa16.02■□□□□ 0.15
PTPN21-208ENST00000556564 ABRACLQ9P1F3 81 aa16.02■□□□□ 0.15
PTPN21-208ENST00000556564 KLF13Q9Y2Y9 288 aaPredicted RBP16.02■□□□□ 0.15
PTPN21-208ENST00000556564 EPHA8P29322 1005 aaPredicted RBP16.01■□□□□ 0.15
PTPN21-208ENST00000556564 PROX2Q3B8N5 592 aa16.01■□□□□ 0.15
PTPN21-208ENST00000556564 ZNF385BQ569K4 471 aa16.01■□□□□ 0.15
PTPN21-208ENST00000556564 PIAS4Q8N2W9 510 aaPredicted RBP16.01■□□□□ 0.15
PTPN21-208ENST00000556564 TTC3P53804 2025 aa16.01■□□□□ 0.15
PTPN21-208ENST00000556564 MEN1O00255 615 aa16.01■□□□□ 0.15
PTPN21-208ENST00000556564 EIF1BO60739 113 aaKnown RBP16.01■□□□□ 0.15
PTPN21-208ENST00000556564 ZNF806P0C7X5 589 aa16.01■□□□□ 0.15
PTPN21-208ENST00000556564 RBMXP38159 391 aaKnown RBP16.01■□□□□ 0.15
PTPN21-208ENST00000556564 HLCSP50747 726 aa16.01■□□□□ 0.15
PTPN21-208ENST00000556564 TSPAN31Q12999 210 aa16.01■□□□□ 0.15
PTPN21-208ENST00000556564 SPRED3Q2MJR0 410 aa16.01■□□□□ 0.15
PTPN21-208ENST00000556564 Q6ZPB1 254 aaPredicted RBP16.01■□□□□ 0.15
PTPN21-208ENST00000556564 HSD17B8Q92506 261 aa16.01■□□□□ 0.15
PTPN21-208ENST00000556564 FXYD6-FXYD2A0A087WZ82 144 aa16.01■□□□□ 0.15
PTPN21-208ENST00000556564 TCRBV3S1A0A5B6 114 aa16.01■□□□□ 0.15
PTPN21-208ENST00000556564 SLC36A2Q495M3 483 aa16.01■□□□□ 0.15
PTPN21-208ENST00000556564 C5orf46Q6UWT4 87 aa16.01■□□□□ 0.15
PTPN21-208ENST00000556564 FXYD6Q9H0Q3 95 aa16.01■□□□□ 0.15
PTPN21-208ENST00000556564 PCDHGA8Q9Y5G5 932 aa16.01■□□□□ 0.15
PTPN21-208ENST00000556564 OR14I1A6ND48 311 aa16.01■□□□□ 0.15
PTPN21-208ENST00000556564 ZNF583Q96ND8 569 aa16.01■□□□□ 0.15
PTPN21-208ENST00000556564 SFTPBP07988 381 aa16.01■□□□□ 0.15
PTPN21-208ENST00000556564 HES3Q5TGS1 186 aa16.01■□□□□ 0.15
PTPN21-208ENST00000556564 CSF3RQ99062 836 aa16.01■□□□□ 0.15
PTPN21-208ENST00000556564 SYNPO2LQ9H987 977 aa16.01■□□□□ 0.15
PTPN21-208ENST00000556564 PRDM4Q9UKN5 801 aa16.01■□□□□ 0.15
PTPN21-208ENST00000556564 C19orf53Q9UNZ5 99 aaPredicted RBP16.01■□□□□ 0.15
PTPN21-208ENST00000556564 ZSCAN5BA6NJL1 495 aa16■□□□□ 0.15
PTPN21-208ENST00000556564 H0YJX3 145 aa16■□□□□ 0.15
PTPN21-208ENST00000556564 SAXO2Q658L1 398 aa16■□□□□ 0.15
PTPN21-208ENST00000556564 LILRA2Q8N149 483 aa16■□□□□ 0.15
PTPN21-208ENST00000556564 OR8H1Q8NGG4 311 aa16■□□□□ 0.15
PTPN21-208ENST00000556564 POLE3Q9NRF9 147 aa16■□□□□ 0.15
PTPN21-208ENST00000556564 LUZP4Q9P127 313 aa16■□□□□ 0.15
PTPN21-208ENST00000556564 OR14J1Q9UGF5 321 aa16■□□□□ 0.15
PTPN21-208ENST00000556564 BMP4P12644 408 aa16■□□□□ 0.15
PTPN21-208ENST00000556564 SLC10A1Q14973 349 aa16■□□□□ 0.15
PTPN21-208ENST00000556564 C1orf140Q5VVS0 124 aa16■□□□□ 0.15
PTPN21-208ENST00000556564 SLC25A25Q6KCM7 469 aa16■□□□□ 0.15
PTPN21-208ENST00000556564 KDM8Q8N371 416 aa16■□□□□ 0.15
PTPN21-208ENST00000556564 LGALS12Q96DT0 336 aa16■□□□□ 0.15
PTPN21-208ENST00000556564 ARSGQ96EG1 525 aa16■□□□□ 0.15
PTPN21-208ENST00000556564 ZNF350Q9GZX5 532 aa16■□□□□ 0.15
PTPN21-208ENST00000556564 ACOT13Q9NPJ3 140 aa16■□□□□ 0.15
PTPN21-208ENST00000556564 MEPEQ9NQ76 525 aaPredicted RBP16■□□□□ 0.15
PTPN21-208ENST00000556564 OTOL1A6NHN0 477 aaPredicted RBP16■□□□□ 0.15
PTPN21-208ENST00000556564 FOLR1P15328 257 aa16■□□□□ 0.15
PTPN21-208ENST00000556564 RBM34P42696 430 aaKnown RBP16■□□□□ 0.15
PTPN21-208ENST00000556564 TMBIM6P55061 237 aa16■□□□□ 0.15
PTPN21-208ENST00000556564 CD83Q01151 205 aa16■□□□□ 0.15
PTPN21-208ENST00000556564 RBM39Q14498 530 aaKnown RBP16■□□□□ 0.15
PTPN21-208ENST00000556564 P2RY14Q15391 338 aa16■□□□□ 0.15
PTPN21-208ENST00000556564 PELI3Q8N2H9 469 aa16■□□□□ 0.15
PTPN21-208ENST00000556564 NMNAT3Q96T66 252 aa16■□□□□ 0.15
PTPN21-208ENST00000556564 SPNS1Q9H2V7 528 aa16■□□□□ 0.15
PTPN21-208ENST00000556564 GON4LQ3T8J9 2241 aa16■□□□□ 0.15
PTPN21-208ENST00000556564 KCNK2O95069 426 aa16■□□□□ 0.15
PTPN21-208ENST00000556564 BSGP35613 385 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms