RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 OR11A1Q9GZK7 315 aa11.14□□□□□ -0.63
SNX6-207ENST00000556303 RABEP2Q9H5N1 569 aa11.14□□□□□ -0.63
SNX6-207ENST00000556303 VIPAS39Q9H9C1 493 aa11.14□□□□□ -0.63
SNX6-207ENST00000556303 ASB6Q9NWX5 421 aa11.14□□□□□ -0.63
SNX6-207ENST00000556303 TAS2R16Q9NYV7 291 aa11.14□□□□□ -0.63
SNX6-207ENST00000556303 MALT1Q9UDY8 824 aa11.14□□□□□ -0.63
SNX6-207ENST00000556303 PRSS50Q9UI38 385 aa11.14□□□□□ -0.63
SNX6-207ENST00000556303 DCTN4Q9UJW0 460 aa11.14□□□□□ -0.63
SNX6-207ENST00000556303 CORO2BQ9UQ03 480 aa11.14□□□□□ -0.63
SNX6-207ENST00000556303 MGAT4BQ9UQ53 548 aa11.14□□□□□ -0.63
SNX6-207ENST00000556303 ZNF443Q9Y2A4 671 aaPredicted RBP11.14□□□□□ -0.63
SNX6-207ENST00000556303 OR5H1A6NKK0 313 aa11.13□□□□□ -0.63
SNX6-207ENST00000556303 A8MVM7 634 aa11.13□□□□□ -0.63
SNX6-207ENST00000556303 LYZL6O75951 148 aa11.13□□□□□ -0.63
SNX6-207ENST00000556303 PLAUP00749 431 aa11.13□□□□□ -0.63
SNX6-207ENST00000556303 IMPDH2P12268 514 aa11.13□□□□□ -0.63
SNX6-207ENST00000556303 HOXB9P17482 250 aaPredicted RBP11.13□□□□□ -0.63
SNX6-207ENST00000556303 PAX7P23759 505 aa11.13□□□□□ -0.63
SNX6-207ENST00000556303 ADSLP30566 484 aaPredicted RBP11.13□□□□□ -0.63
SNX6-207ENST00000556303 IDUAP35475 653 aa11.13□□□□□ -0.63
SNX6-207ENST00000556303 PTH2RP49190 550 aa11.13□□□□□ -0.63
SNX6-207ENST00000556303 CAPRIN1Q14444 709 aaKnown RBP11.13□□□□□ -0.63
SNX6-207ENST00000556303 ETFDHQ16134 617 aa11.13□□□□□ -0.63
SNX6-207ENST00000556303 ZNF672Q499Z4 452 aaPredicted RBP11.13□□□□□ -0.63
SNX6-207ENST00000556303 SEZ6L2Q6UXD5 910 aa11.13□□□□□ -0.63
SNX6-207ENST00000556303 HDXQ7Z353 690 aa11.13□□□□□ -0.63
SNX6-207ENST00000556303 YTHDF3Q7Z739 585 aaKnown RBP11.13□□□□□ -0.63
SNX6-207ENST00000556303 VRK2Q86Y07 508 aa11.13□□□□□ -0.63
SNX6-207ENST00000556303 UBE2J2Q8N2K1 259 aa11.13□□□□□ -0.63
SNX6-207ENST00000556303 BHLHE22Q8NFJ8 381 aaPredicted RBP11.13□□□□□ -0.63
SNX6-207ENST00000556303 STK35Q8TDR2 534 aa11.13□□□□□ -0.63
SNX6-207ENST00000556303 DYDC1Q8WWB3 177 aa11.13□□□□□ -0.63
SNX6-207ENST00000556303 TMEM45BQ96B21 275 aa11.13□□□□□ -0.63
SNX6-207ENST00000556303 ZNF775Q96BV0 537 aaPredicted RBP11.13□□□□□ -0.63
SNX6-207ENST00000556303 SPDL1Q96EA4 605 aa11.13□□□□□ -0.63
SNX6-207ENST00000556303 MUS81Q96NY9 551 aa11.13□□□□□ -0.63
SNX6-207ENST00000556303 EVA1AQ9H8M9 152 aa11.13□□□□□ -0.63
SNX6-207ENST00000556303 C12orf10Q9HB07 376 aa11.13□□□□□ -0.63
SNX6-207ENST00000556303 SLCO1B3Q9NPD5 702 aa11.13□□□□□ -0.63
SNX6-207ENST00000556303 RLIMQ9NVW2 624 aa11.13□□□□□ -0.63
SNX6-207ENST00000556303 ARGLU1Q9NWB6 273 aaPredicted RBP11.13□□□□□ -0.63
SNX6-207ENST00000556303 FLVCR1Q9Y5Y0 555 aa11.13□□□□□ -0.63
SNX6-207ENST00000556303 CIB4A0PJX0 185 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 DPRXA6NFQ7 191 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 OR6C65A6NJZ3 312 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 LIPT2A6NK58 231 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 OVOL3O00110 214 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 PDLIM1O00151 329 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 NPIPB7O75200 414 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 DANCRP0C864 163 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 GKN3PP0CG01 181 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 CCNA2P20248 432 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 PTAFRP25105 342 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 PRKAR1BP31321 381 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 AQP5P55064 265 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 RPS4XP62701 263 aaKnown RBP11.12□□□□□ -0.63
SNX6-207ENST00000556303 TGFBR3Q03167 851 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 TSC22D1Q15714 1073 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 STK11Q15831 433 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 GTDC1Q4AE62 458 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 TTMPQ5BVD1 217 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 ZNF311Q5JNZ3 666 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 SLC2A7Q6PXP3 512 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 KLHL17Q6TDP4 642 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 C5orf46Q6UWT4 87 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 FUNDC1Q8IVP5 155 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 CCDC103Q8IW40 242 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 CLIP4Q8N3C7 705 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 C17orf78Q8N4C9 275 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 C1orf162Q8NEQ5 155 aaPredicted RBP11.12□□□□□ -0.63
SNX6-207ENST00000556303 LILRB1Q8NHL6 650 aaPredicted RBP11.12□□□□□ -0.63
SNX6-207ENST00000556303 GTPBP3Q969Y2 492 aaKnown RBP11.12□□□□□ -0.63
SNX6-207ENST00000556303 TRMT61AQ96FX7 289 aaKnown RBP11.12□□□□□ -0.63
SNX6-207ENST00000556303 PERPQ96FX8 193 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 AURKBQ96GD4 344 aaPredicted RBP11.12□□□□□ -0.63
SNX6-207ENST00000556303 BOD1Q96IK1 185 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 COX4I2Q96KJ9 171 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 SIKE1Q9BRV8 207 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 SPATA5L1Q9BVQ7 753 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 TAPBPLQ9BX59 468 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 TRIM2Q9C040 744 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 AMBRA1Q9C0C7 1298 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 SLC52A3Q9NQ40 469 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 INTS9Q9NV88 658 aaKnown RBP11.12□□□□□ -0.63
SNX6-207ENST00000556303 FAIMQ9NVQ4 179 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 JMJD1CQ15652 2540 aa11.12□□□□□ -0.63
SNX6-207ENST00000556303 A0A1W2PP18 115 aa11.11□□□□□ -0.63
SNX6-207ENST00000556303 ZC3H12DA2A288 527 aaKnown RBP11.11□□□□□ -0.63
SNX6-207ENST00000556303 AQP7P3A6NL99 342 aa11.11□□□□□ -0.63
SNX6-207ENST00000556303 CCT8L1PA6NM43 557 aa11.11□□□□□ -0.63
SNX6-207ENST00000556303 C5orf58C9J3I9 102 aa11.11□□□□□ -0.63
SNX6-207ENST00000556303 NCF2P19878 526 aaPredicted RBP11.11□□□□□ -0.63
SNX6-207ENST00000556303 EDNRAP25101 427 aa11.11□□□□□ -0.63
SNX6-207ENST00000556303 NTF4P34130 210 aa11.11□□□□□ -0.63
SNX6-207ENST00000556303 BSPH1Q075Z2 132 aa11.11□□□□□ -0.63
SNX6-207ENST00000556303 CEACAM7Q14002 265 aa11.11□□□□□ -0.63
SNX6-207ENST00000556303 SQLEQ14534 574 aa11.11□□□□□ -0.63
SNX6-207ENST00000556303 OTUD3Q5T2D3 398 aaPredicted RBP11.11□□□□□ -0.63
SNX6-207ENST00000556303 REEP3Q6NUK4 255 aa11.11□□□□□ -0.63
SNX6-207ENST00000556303 TMEM108Q6UXF1 575 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms