RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 HPCAP84074 193 aa11.64□□□□□ -0.55
TGFB3-204ENST00000556285 SRSF2Q01130 221 aaKnown RBP11.64□□□□□ -0.55
TGFB3-204ENST00000556285 LGALS3BPQ08380 585 aa11.64□□□□□ -0.55
TGFB3-204ENST00000556285 EPS8Q12929 822 aa11.64□□□□□ -0.55
TGFB3-204ENST00000556285 BNIP2Q12982 314 aa11.64□□□□□ -0.55
TGFB3-204ENST00000556285 SLC17A1Q14916 467 aa11.64□□□□□ -0.55
TGFB3-204ENST00000556285 OGFOD2Q6N063 350 aa11.64□□□□□ -0.55
TGFB3-204ENST00000556285 KLHL17Q6TDP4 642 aa11.64□□□□□ -0.55
TGFB3-204ENST00000556285 LRRC74BQ6ZQY2 392 aa11.64□□□□□ -0.55
TGFB3-204ENST00000556285 ZNF621Q6ZSS3 439 aa11.64□□□□□ -0.55
TGFB3-204ENST00000556285 HIPK1Q86Z02 1210 aa11.64□□□□□ -0.55
TGFB3-204ENST00000556285 MUC15Q8N387 334 aa11.64□□□□□ -0.55
TGFB3-204ENST00000556285 ZNF525Q8N782 197 aa11.64□□□□□ -0.55
TGFB3-204ENST00000556285 TMEM99Q8N816 258 aa11.64□□□□□ -0.55
TGFB3-204ENST00000556285 WDR60Q8WVS4 1066 aa11.64□□□□□ -0.55
TGFB3-204ENST00000556285 RADILQ96JH8 1075 aa11.64□□□□□ -0.55
TGFB3-204ENST00000556285 ADAD1Q96M93 576 aaKnown RBP11.64□□□□□ -0.55
TGFB3-204ENST00000556285 ZNF385AQ96PM9 386 aaKnown RBP11.64□□□□□ -0.55
TGFB3-204ENST00000556285 OR52E6Q96RD3 313 aa11.64□□□□□ -0.55
TGFB3-204ENST00000556285 PANX1Q96RD7 426 aa11.64□□□□□ -0.55
TGFB3-204ENST00000556285 RHNO1Q9BSD3 238 aa11.64□□□□□ -0.55
TGFB3-204ENST00000556285 AMBRA1Q9C0C7 1298 aa11.64□□□□□ -0.55
TGFB3-204ENST00000556285 CENPHQ9H3R5 247 aa11.64□□□□□ -0.55
TGFB3-204ENST00000556285 WDR55Q9H6Y2 383 aaPredicted RBP11.64□□□□□ -0.55
TGFB3-204ENST00000556285 SSU72Q9NP77 194 aaKnown RBP11.64□□□□□ -0.55
TGFB3-204ENST00000556285 KCNK9Q9NPC2 374 aa11.64□□□□□ -0.55
TGFB3-204ENST00000556285 SLC17A5Q9NRA2 495 aa11.64□□□□□ -0.55
TGFB3-204ENST00000556285 MGAT4BQ9UQ53 548 aa11.64□□□□□ -0.55
TGFB3-204ENST00000556285 GPR45Q9Y5Y3 372 aa11.64□□□□□ -0.55
TGFB3-204ENST00000556285 ATP23Q9Y6H3 246 aa11.64□□□□□ -0.55
TGFB3-204ENST00000556285 TM9SF1O15321 606 aa11.63□□□□□ -0.55
TGFB3-204ENST00000556285 ZNF208O43345 1280 aa11.63□□□□□ -0.55
TGFB3-204ENST00000556285 TLX2O43763 284 aaPredicted RBP11.63□□□□□ -0.55
TGFB3-204ENST00000556285 AKR7A3O95154 331 aa11.63□□□□□ -0.55
TGFB3-204ENST00000556285 PGRP06401 933 aa11.63□□□□□ -0.55
TGFB3-204ENST00000556285 NR2F1P10589 423 aa11.63□□□□□ -0.55
TGFB3-204ENST00000556285 FKBP2P26885 142 aaKnown RBP11.63□□□□□ -0.55
TGFB3-204ENST00000556285 ACAA2P42765 397 aaKnown RBP11.63□□□□□ -0.55
TGFB3-204ENST00000556285 SLC1A3P43003 542 aa11.63□□□□□ -0.55
TGFB3-204ENST00000556285 HTR3AP46098 478 aa11.63□□□□□ -0.55
TGFB3-204ENST00000556285 MVDP53602 400 aa11.63□□□□□ -0.55
TGFB3-204ENST00000556285 CEACAM7Q14002 265 aa11.63□□□□□ -0.55
TGFB3-204ENST00000556285 NRF1Q16656 503 aa11.63□□□□□ -0.55
TGFB3-204ENST00000556285 DPY19L1Q2PZI1 675 aa11.63□□□□□ -0.55
TGFB3-204ENST00000556285 TNFAIP8L3Q5GJ75 292 aa11.63□□□□□ -0.55
TGFB3-204ENST00000556285 OTUD3Q5T2D3 398 aaPredicted RBP11.63□□□□□ -0.55
TGFB3-204ENST00000556285 ZNF836Q6ZNA1 936 aa11.63□□□□□ -0.55
TGFB3-204ENST00000556285 SSX8Q7RTT4 187 aa11.63□□□□□ -0.55
TGFB3-204ENST00000556285 VRK2Q86Y07 508 aa11.63□□□□□ -0.55
TGFB3-204ENST00000556285 CMIPQ8IY22 773 aa11.63□□□□□ -0.55
TGFB3-204ENST00000556285 FBXL14Q8N1E6 418 aa11.63□□□□□ -0.55
TGFB3-204ENST00000556285 DDIT4LQ96D03 193 aa11.63□□□□□ -0.55
TGFB3-204ENST00000556285 PAIP2Q9BPZ3 127 aaKnown RBP11.63□□□□□ -0.55
TGFB3-204ENST00000556285 PARD6BQ9BYG5 372 aa11.63□□□□□ -0.55
TGFB3-204ENST00000556285 ADAM19Q9H013 955 aa11.63□□□□□ -0.55
TGFB3-204ENST00000556285 MANSC1Q9H8J5 431 aa11.63□□□□□ -0.55
TGFB3-204ENST00000556285 MTHFD2LQ9H903 347 aaPredicted RBP11.63□□□□□ -0.55
TGFB3-204ENST00000556285 UPB1Q9UBR1 384 aa11.63□□□□□ -0.55
TGFB3-204ENST00000556285 SLC9A8Q9Y2E8 581 aa11.63□□□□□ -0.55
TGFB3-204ENST00000556285 CFAP73A6NFT4 308 aa11.62□□□□□ -0.55
TGFB3-204ENST00000556285 LIPT2A6NK58 231 aa11.62□□□□□ -0.55
TGFB3-204ENST00000556285 A8MV72 311 aaPredicted RBP11.62□□□□□ -0.55
TGFB3-204ENST00000556285 ATP6V1G2-DDX39BF2Z307 99 aa11.62□□□□□ -0.55
TGFB3-204ENST00000556285 FAAHO00519 579 aa11.62□□□□□ -0.55
TGFB3-204ENST00000556285 KLF11O14901 512 aa11.62□□□□□ -0.55
TGFB3-204ENST00000556285 EIF1BO60739 113 aaKnown RBP11.62□□□□□ -0.55
TGFB3-204ENST00000556285 PRG2P13727 222 aa11.62□□□□□ -0.55
TGFB3-204ENST00000556285 ETFAP13804 333 aa11.62□□□□□ -0.55
TGFB3-204ENST00000556285 IL7RP16871 459 aa11.62□□□□□ -0.55
TGFB3-204ENST00000556285 CDH2P19022 906 aaPredicted RBP11.62□□□□□ -0.55
TGFB3-204ENST00000556285 EPHA3P29320 983 aa11.62□□□□□ -0.55
TGFB3-204ENST00000556285 WDR4P57081 412 aaKnown RBP11.62□□□□□ -0.55
TGFB3-204ENST00000556285 RAB35Q15286 201 aa11.62□□□□□ -0.55
TGFB3-204ENST00000556285 OR7A5Q15622 319 aa11.62□□□□□ -0.55
TGFB3-204ENST00000556285 GTDC1Q4AE62 458 aa11.62□□□□□ -0.55
TGFB3-204ENST00000556285 HIKESHIQ53FT3 197 aa11.62□□□□□ -0.55
TGFB3-204ENST00000556285 CEP85LQ5SZL2 805 aa11.62□□□□□ -0.55
TGFB3-204ENST00000556285 OR7E24Q6IFN5 339 aa11.62□□□□□ -0.55
TGFB3-204ENST00000556285 PAQR6Q6TCH4 344 aa11.62□□□□□ -0.55
TGFB3-204ENST00000556285 LRRC34Q8IZ02 419 aa11.62□□□□□ -0.55
TGFB3-204ENST00000556285 ANKRD42Q8N9B4 389 aa11.62□□□□□ -0.55
TGFB3-204ENST00000556285 OR9K2Q8NGE7 335 aa11.62□□□□□ -0.55
TGFB3-204ENST00000556285 NAA11Q9BSU3 229 aaPredicted RBP11.62□□□□□ -0.55
TGFB3-204ENST00000556285 DCTN4Q9UJW0 460 aa11.62□□□□□ -0.55
TGFB3-204ENST00000556285 CHST2Q9Y4C5 530 aa11.62□□□□□ -0.55
TGFB3-204ENST00000556285 CDHR4A6H8M9 788 aa11.61□□□□□ -0.55
TGFB3-204ENST00000556285 H7C417 338 aa11.61□□□□□ -0.55
TGFB3-204ENST00000556285 DBIP07108 87 aaKnown RBP11.61□□□□□ -0.55
TGFB3-204ENST00000556285 KITP10721 976 aa11.61□□□□□ -0.55
TGFB3-204ENST00000556285 P2RY4P51582 365 aa11.61□□□□□ -0.55
TGFB3-204ENST00000556285 MST1LQ2TV78 715 aa11.61□□□□□ -0.55
TGFB3-204ENST00000556285 TMEM249Q2WGJ8 235 aa11.61□□□□□ -0.55
TGFB3-204ENST00000556285 RPS26P11Q5JNZ5 115 aaPredicted RBP11.61□□□□□ -0.55
TGFB3-204ENST00000556285 C6orf52Q5T4I8 152 aa11.61□□□□□ -0.55
TGFB3-204ENST00000556285 CLEC2AQ6UVW9 174 aa11.61□□□□□ -0.55
TGFB3-204ENST00000556285 LINGO2Q7L985 606 aa11.61□□□□□ -0.55
TGFB3-204ENST00000556285 AAED1Q7RTV5 226 aa11.61□□□□□ -0.55
TGFB3-204ENST00000556285 SPATA19Q7Z5L4 167 aa11.61□□□□□ -0.55
TGFB3-204ENST00000556285 CLIP4Q8N3C7 705 aa11.61□□□□□ -0.55
TGFB3-204ENST00000556285 CADM2Q8N3J6 435 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms