RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 ARHGDIGQ99819 225 aa13.5□□□□□ -0.25
ACTN1-217ENST00000556203 NAA11Q9BSU3 229 aaPredicted RBP13.5□□□□□ -0.25
ACTN1-217ENST00000556203 TAPBPLQ9BX59 468 aa13.5□□□□□ -0.25
ACTN1-217ENST00000556203 TRIM2Q9C040 744 aa13.5□□□□□ -0.25
ACTN1-217ENST00000556203 EVA1AQ9H8M9 152 aa13.5□□□□□ -0.25
ACTN1-217ENST00000556203 TMEM27Q9HBJ8 222 aa13.5□□□□□ -0.25
ACTN1-217ENST00000556203 NOTCH2Q04721 2471 aa13.5□□□□□ -0.25
ACTN1-217ENST00000556203 IGKV3D-15A0A087WSY6 115 aa13.49□□□□□ -0.25
ACTN1-217ENST00000556203 CCT8L1PA6NM43 557 aa13.49□□□□□ -0.25
ACTN1-217ENST00000556203 ZNF716A6NP11 495 aa13.49□□□□□ -0.25
ACTN1-217ENST00000556203 TPST2O60704 377 aa13.49□□□□□ -0.25
ACTN1-217ENST00000556203 EIF1BO60739 113 aaKnown RBP13.49□□□□□ -0.25
ACTN1-217ENST00000556203 NPIPB7O75200 414 aa13.49□□□□□ -0.25
ACTN1-217ENST00000556203 C8BP07358 591 aa13.49□□□□□ -0.25
ACTN1-217ENST00000556203 CD247P20963 164 aa13.49□□□□□ -0.25
ACTN1-217ENST00000556203 CRYBA2P53672 197 aa13.49□□□□□ -0.25
ACTN1-217ENST00000556203 H3F3AP84243 136 aa13.49□□□□□ -0.25
ACTN1-217ENST00000556203 OR1Q1Q15612 314 aa13.49□□□□□ -0.25
ACTN1-217ENST00000556203 ALG10BQ5I7T1 473 aa13.49□□□□□ -0.25
ACTN1-217ENST00000556203 PAQR6Q6TCH4 344 aa13.49□□□□□ -0.25
ACTN1-217ENST00000556203 CCDC80Q76M96 950 aa13.49□□□□□ -0.25
ACTN1-217ENST00000556203 ARPINQ7Z6K5 226 aa13.49□□□□□ -0.25
ACTN1-217ENST00000556203 GALNT5Q7Z7M9 940 aa13.49□□□□□ -0.25
ACTN1-217ENST00000556203 RANBP3LQ86VV4 465 aaPredicted RBP13.49□□□□□ -0.25
ACTN1-217ENST00000556203 OR2T12Q8NG77 320 aa13.49□□□□□ -0.25
ACTN1-217ENST00000556203 RNF217Q8TC41 542 aa13.49□□□□□ -0.25
ACTN1-217ENST00000556203 STK35Q8TDR2 534 aa13.49□□□□□ -0.25
ACTN1-217ENST00000556203 DNAJA4Q8WW22 397 aaPredicted RBP13.49□□□□□ -0.25
ACTN1-217ENST00000556203 CMTM5Q96DZ9 223 aa13.49□□□□□ -0.25
ACTN1-217ENST00000556203 WFIKKN1Q96NZ8 548 aa13.49□□□□□ -0.25
ACTN1-217ENST00000556203 MED18Q9BUE0 208 aa13.49□□□□□ -0.25
ACTN1-217ENST00000556203 EFCAB1Q9HAE3 211 aa13.49□□□□□ -0.25
ACTN1-217ENST00000556203 C12orf10Q9HB07 376 aa13.49□□□□□ -0.25
ACTN1-217ENST00000556203 FANCFQ9NPI8 374 aa13.49□□□□□ -0.25
ACTN1-217ENST00000556203 RASSF1Q9NS23 344 aa13.49□□□□□ -0.25
ACTN1-217ENST00000556203 ADPRHL2Q9NX46 363 aa13.49□□□□□ -0.25
ACTN1-217ENST00000556203 CMTM6Q9NX76 183 aa13.49□□□□□ -0.25
ACTN1-217ENST00000556203 SELENONQ9NZV5 590 aa13.49□□□□□ -0.25
ACTN1-217ENST00000556203 EMC3Q9P0I2 261 aa13.49□□□□□ -0.25
ACTN1-217ENST00000556203 A0A0B4J2E0 115 aa13.48□□□□□ -0.25
ACTN1-217ENST00000556203 A0A1B0GX12 115 aa13.48□□□□□ -0.25
ACTN1-217ENST00000556203 CASKO14936 926 aa13.48□□□□□ -0.25
ACTN1-217ENST00000556203 AKR7A3O95154 331 aa13.48□□□□□ -0.25
ACTN1-217ENST00000556203 AHSA1O95433 338 aa13.48□□□□□ -0.25
ACTN1-217ENST00000556203 PNMTP11086 282 aa13.48□□□□□ -0.25
ACTN1-217ENST00000556203 EDNRAP25101 427 aa13.48□□□□□ -0.25
ACTN1-217ENST00000556203 NUDT2P50583 147 aa13.48□□□□□ -0.25
ACTN1-217ENST00000556203 SLC16A1P53985 500 aa13.48□□□□□ -0.25
ACTN1-217ENST00000556203 EGR4Q05215 589 aa13.48□□□□□ -0.25
ACTN1-217ENST00000556203 VEZF1Q14119 521 aa13.48□□□□□ -0.25
ACTN1-217ENST00000556203 NRF1Q16656 503 aa13.48□□□□□ -0.25
ACTN1-217ENST00000556203 OTUD3Q5T2D3 398 aaPredicted RBP13.48□□□□□ -0.25
ACTN1-217ENST00000556203 FBXW10Q5XX13 1052 aa13.48□□□□□ -0.25
ACTN1-217ENST00000556203 ANKRD34AQ69YU3 496 aa13.48□□□□□ -0.25
ACTN1-217ENST00000556203 ULK3Q6PHR2 472 aa13.48□□□□□ -0.25
ACTN1-217ENST00000556203 STAC2Q6ZMT1 411 aa13.48□□□□□ -0.25
ACTN1-217ENST00000556203 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.48□□□□□ -0.25
ACTN1-217ENST00000556203 GABRG1Q8N1C3 465 aa13.48□□□□□ -0.25
ACTN1-217ENST00000556203 OR6T1Q8NGN1 323 aa13.48□□□□□ -0.25
ACTN1-217ENST00000556203 VANGL1Q8TAA9 524 aaPredicted RBP13.48□□□□□ -0.25
ACTN1-217ENST00000556203 RASSF5Q8WWW0 418 aa13.48□□□□□ -0.25
ACTN1-217ENST00000556203 MCHR1Q99705 422 aa13.48□□□□□ -0.25
ACTN1-217ENST00000556203 HOPXQ9BPY8 73 aaPredicted RBP13.48□□□□□ -0.25
ACTN1-217ENST00000556203 POLDIP3Q9BY77 421 aaKnown RBP13.48□□□□□ -0.25
ACTN1-217ENST00000556203 CLEC4MQ9H2X3 399 aaPredicted RBP13.48□□□□□ -0.25
ACTN1-217ENST00000556203 PRSS50Q9UI38 385 aa13.48□□□□□ -0.25
ACTN1-217ENST00000556203 AP3M1Q9Y2T2 418 aa13.48□□□□□ -0.25
ACTN1-217ENST00000556203 ARL2BPQ9Y2Y0 163 aa13.48□□□□□ -0.25
ACTN1-217ENST00000556203 NOSIPQ9Y314 301 aaKnown RBP13.48□□□□□ -0.25
ACTN1-217ENST00000556203 FAM221AA4D161 298 aa13.47□□□□□ -0.25
ACTN1-217ENST00000556203 GPR171O14626 319 aa13.47□□□□□ -0.25
ACTN1-217ENST00000556203 FMO6PO60774 539 aa13.47□□□□□ -0.25
ACTN1-217ENST00000556203 ADAP00813 363 aa13.47□□□□□ -0.25
ACTN1-217ENST00000556203 PRDX6P30041 224 aa13.47□□□□□ -0.25
ACTN1-217ENST00000556203 RPS5P46782 204 aaKnown RBP13.47□□□□□ -0.25
ACTN1-217ENST00000556203 OR3A2P47893 321 aa13.47□□□□□ -0.25
ACTN1-217ENST00000556203 SLC7A2P52569 658 aa13.47□□□□□ -0.25
ACTN1-217ENST00000556203 NPTX1Q15818 432 aa13.47□□□□□ -0.25
ACTN1-217ENST00000556203 FAM91A1Q658Y4 838 aa13.47□□□□□ -0.25
ACTN1-217ENST00000556203 CRYBG3Q68DQ2 2970 aa13.47□□□□□ -0.25
ACTN1-217ENST00000556203 HACD2Q6Y1H2 254 aa13.47□□□□□ -0.25
ACTN1-217ENST00000556203 CXorf67Q86X51 503 aaPredicted RBP13.47□□□□□ -0.25
ACTN1-217ENST00000556203 RBM45Q8IUH3 476 aaKnown RBP13.47□□□□□ -0.25
ACTN1-217ENST00000556203 SLC15A3Q8IY34 581 aa13.47□□□□□ -0.25
ACTN1-217ENST00000556203 ZNF100Q8IYN0 542 aa13.47□□□□□ -0.25
ACTN1-217ENST00000556203 MICU2Q8IYU8 434 aa13.47□□□□□ -0.25
ACTN1-217ENST00000556203 TMEM99Q8N816 258 aa13.47□□□□□ -0.25
ACTN1-217ENST00000556203 OR4D11Q8NGI4 311 aa13.47□□□□□ -0.25
ACTN1-217ENST00000556203 SLC25A36Q96CQ1 311 aa13.47□□□□□ -0.25
ACTN1-217ENST00000556203 KTI12Q96EK9 354 aaPredicted RBP13.47□□□□□ -0.25
ACTN1-217ENST00000556203 SLC47A1Q96FL8 570 aa13.47□□□□□ -0.25
ACTN1-217ENST00000556203 ZC3HAV1LQ96H79 300 aaKnown RBP13.47□□□□□ -0.25
ACTN1-217ENST00000556203 PTDSS2Q9BVG9 487 aa13.47□□□□□ -0.25
ACTN1-217ENST00000556203 ACTR6Q9GZN1 396 aa13.47□□□□□ -0.25
ACTN1-217ENST00000556203 GMPR2Q9P2T1 348 aaKnown RBP13.47□□□□□ -0.25
ACTN1-217ENST00000556203 GPR52Q9Y2T5 361 aa13.47□□□□□ -0.25
ACTN1-217ENST00000556203 CELSR2Q9HCU4 2923 aa13.47□□□□□ -0.25
ACTN1-217ENST00000556203 IGKV1D-42A0A075B6H8 117 aa13.46□□□□□ -0.25
ACTN1-217ENST00000556203 A0A087WUJ7 227 aa13.46□□□□□ -0.25
ACTN1-217ENST00000556203 ELOVL7A1L3X0 281 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms