RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 OR2T5Q6IEZ7 315 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 OR2A2Q6IF42 318 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 PPP4R4Q6NUP7 873 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 ZFP1Q6P2D0 407 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 ZNF730Q6ZMV8 503 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 HIST3H2AQ7L7L0 130 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 FGD2Q7Z6J4 655 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 GGNQ86UU5 652 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 DOLPP1Q86YN1 238 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 MCEMP1Q8IX19 187 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 CDK20Q8IZL9 346 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 SLC43A2Q8N370 569 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 LINC00471Q8N535 108 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 OR2T29Q8NH02 315 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 MFSD8Q8NHS3 518 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 PRR7Q8TB68 274 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 TMEM239Q8WW34 195 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 ACOT11Q8WXI4 607 aaPredicted RBP6.86□□□□□ -1.31
TDP1-214ENST00000556063 HIST1H2ACQ93077 130 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 WNT2BQ93097 391 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 UTP4Q969X6 686 aaKnown RBP6.86□□□□□ -1.31
TDP1-214ENST00000556063 ZNF524Q96C55 264 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 ZFP3Q96NJ6 502 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 UCN2Q96RP3 112 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 TRIB1Q96RU8 372 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 VKORC1Q9BQB6 163 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 TUBA1CQ9BQE3 449 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 ASPNQ9BXN1 380 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 OR11A1Q9GZK7 315 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 REEP1Q9H902 201 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 CCM2LQ9NUG4 571 aaPredicted RBP6.86□□□□□ -1.31
TDP1-214ENST00000556063 C6orf203Q9P0P8 240 aaPredicted RBP6.86□□□□□ -1.31
TDP1-214ENST00000556063 SH3BGRL2Q9UJC5 107 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 TINAGQ9UJW2 476 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 TMEM5Q9Y2B1 443 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 CORINQ9Y5Q5 1042 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 ZFHX4Q86UP3 3567 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 MED12LQ86YW9 2145 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 DOCK7Q96N67 2140 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 ARHGAP21Q5T5U3 1957 aa6.86□□□□□ -1.31
TDP1-214ENST00000556063 ZC3H12DA2A288 527 aaKnown RBP6.85□□□□□ -1.31
TDP1-214ENST00000556063 LIPT2A6NK58 231 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 J3KTA2 159 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 J3QKU1 62 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 FFAR1O14842 300 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 HNRNPRO43390 633 aaKnown RBP6.85□□□□□ -1.31
TDP1-214ENST00000556063 RRP9O43818 475 aaKnown RBP6.85□□□□□ -1.31
TDP1-214ENST00000556063 NPIPB7O75200 414 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 FKBP6O75344 327 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 DEAF1O75398 565 aaPredicted RBP6.85□□□□□ -1.31
TDP1-214ENST00000556063 DIRAS1O95057 198 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 VAMP5O95183 116 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 PLGP00747 810 aaPredicted RBP6.85□□□□□ -1.31
TDP1-214ENST00000556063 CST1P01037 141 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 IGF2P01344 180 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 IL2RAP01589 272 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 MT-ND1P03886 318 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 ENPP1P22413 925 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 SHC1P29353 583 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 RRM2P31350 389 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 RPS5P46782 204 aaKnown RBP6.85□□□□□ -1.31
TDP1-214ENST00000556063 ARHGDIAP52565 204 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 AGFG1P52594 562 aaKnown RBP6.85□□□□□ -1.31
TDP1-214ENST00000556063 SMSP52788 366 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 FOXD4Q12950 439 aaPredicted RBP6.85□□□□□ -1.31
TDP1-214ENST00000556063 KPNB1Q14974 876 aaKnown RBP6.85□□□□□ -1.31
TDP1-214ENST00000556063 PON3Q15166 354 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 RNPS1Q15287 305 aaKnown RBP6.85□□□□□ -1.31
TDP1-214ENST00000556063 OR7A5Q15622 319 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 CTU2Q2VPK5 515 aaKnown RBP6.85□□□□□ -1.31
TDP1-214ENST00000556063 C4orf17Q53FE4 359 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 EMC4Q5J8M3 183 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 C1QL3Q5VWW1 255 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 PAQR6Q6TCH4 344 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 LINC00114Q6XXX2 140 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 ZNF771Q7L3S4 317 aaPredicted RBP6.85□□□□□ -1.31
TDP1-214ENST00000556063 MAMDC2Q7Z304 686 aaPredicted RBP6.85□□□□□ -1.31
TDP1-214ENST00000556063 PAPD5Q8NDF8 572 aaKnown RBP6.85□□□□□ -1.31
TDP1-214ENST00000556063 PIGXQ8TBF5 258 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 STMN2Q93045 179 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 RELTQ969Z4 430 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 SLC25A36Q96CQ1 311 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 SGTBQ96EQ0 304 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 DUS3LQ96G46 650 aaKnown RBP6.85□□□□□ -1.31
TDP1-214ENST00000556063 ADGRG7Q96K78 797 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 ARL5BQ96KC2 179 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 DHRS1Q96LJ7 313 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 PRSS27Q9BQR3 290 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 TACO1Q9BSH4 297 aaKnown RBP6.85□□□□□ -1.31
TDP1-214ENST00000556063 ZNF426Q9BUY5 554 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 NDEL1Q9GZM8 345 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 COQ10BQ9H8M1 238 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 GLRX2Q9NS18 164 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 KLHL9Q9P2J3 617 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 RHCGQ9UBD6 479 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 B3GALT5Q9Y2C3 310 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 MEMO1Q9Y316 297 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 SAMHD1Q9Y3Z3 626 aaKnown RBP6.85□□□□□ -1.31
TDP1-214ENST00000556063 TESMINQ9Y4I5 508 aa6.85□□□□□ -1.31
TDP1-214ENST00000556063 AP4S1Q9Y587 144 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms