RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 NPEPL1Q8NDH3 523 aa22.18■■□□□ 1.14
TMEM260-207ENST00000555497 C17orf47Q8NEP4 570 aa22.18■■□□□ 1.14
TMEM260-207ENST00000555497 ELOA3Q8NG57 546 aa22.18■■□□□ 1.14
TMEM260-207ENST00000555497 NMNAT3Q96T66 252 aa22.18■■□□□ 1.14
TMEM260-207ENST00000555497 VN1R1Q9GZP7 353 aa22.18■■□□□ 1.14
TMEM260-207ENST00000555497 NRIP3Q9NQ35 241 aa22.18■■□□□ 1.14
TMEM260-207ENST00000555497 KLHL1Q9NR64 748 aa22.18■■□□□ 1.14
TMEM260-207ENST00000555497 COMMD3Q9UBI1 195 aa22.18■■□□□ 1.14
TMEM260-207ENST00000555497 COL5A1P20908 1838 aaPredicted RBP22.18■■□□□ 1.14
TMEM260-207ENST00000555497 ERVK-25P63136 954 aa22.18■■□□□ 1.14
TMEM260-207ENST00000555497 VASH1Q7L8A9 365 aaPredicted RBP22.18■■□□□ 1.14
TMEM260-207ENST00000555497 OR5J2Q8NH18 312 aa22.18■■□□□ 1.14
TMEM260-207ENST00000555497 CCDC74AQ96AQ1 378 aa22.18■■□□□ 1.14
TMEM260-207ENST00000555497 RASD2Q96D21 266 aa22.18■■□□□ 1.14
TMEM260-207ENST00000555497 MOGAT1Q96PD6 335 aa22.18■■□□□ 1.14
TMEM260-207ENST00000555497 CDX2Q99626 313 aaPredicted RBP22.18■■□□□ 1.14
TMEM260-207ENST00000555497 PCNX3Q9H6A9 2034 aa22.17■■□□□ 1.14
TMEM260-207ENST00000555497 C4orf47A7E2U8 309 aa22.17■■□□□ 1.14
TMEM260-207ENST00000555497 AGRPO00253 132 aa22.17■■□□□ 1.14
TMEM260-207ENST00000555497 DYRK3O43781 588 aa22.17■■□□□ 1.14
TMEM260-207ENST00000555497 GALP22466 123 aa22.17■■□□□ 1.14
TMEM260-207ENST00000555497 DEFA1P59665 94 aa22.17■■□□□ 1.14
TMEM260-207ENST00000555497 DEFA3P59666 94 aa22.17■■□□□ 1.14
TMEM260-207ENST00000555497 EGR4Q05215 589 aa22.17■■□□□ 1.14
TMEM260-207ENST00000555497 CARTPTQ16568 116 aa22.17■■□□□ 1.14
TMEM260-207ENST00000555497 WDR74Q6RFH5 385 aaPredicted RBP22.17■■□□□ 1.14
TMEM260-207ENST00000555497 Q7L0L9 218 aa22.17■■□□□ 1.14
TMEM260-207ENST00000555497 ELF4Q99607 663 aaPredicted RBP22.17■■□□□ 1.14
TMEM260-207ENST00000555497 SLC19A3Q9BZV2 496 aa22.17■■□□□ 1.14
TMEM260-207ENST00000555497 CCDC86Q9H6F5 360 aaKnown RBP22.17■■□□□ 1.14
TMEM260-207ENST00000555497 EXOSC3Q9NQT5 275 aaKnown RBP22.17■■□□□ 1.14
TMEM260-207ENST00000555497 SACM1LQ9NTJ5 587 aa22.17■■□□□ 1.14
TMEM260-207ENST00000555497 KLHL21Q9UJP4 597 aa22.17■■□□□ 1.14
TMEM260-207ENST00000555497 MKL2Q9ULH7 1088 aa22.17■■□□□ 1.14
TMEM260-207ENST00000555497 A0A1B0GX78 115 aa22.16■■□□□ 1.14
TMEM260-207ENST00000555497 FABP12A6NFH5 140 aa22.16■■□□□ 1.14
TMEM260-207ENST00000555497 GMFGO60234 142 aa22.16■■□□□ 1.14
TMEM260-207ENST00000555497 IL7P13232 177 aa22.16■■□□□ 1.14
TMEM260-207ENST00000555497 AP3S1Q92572 193 aa22.16■■□□□ 1.14
TMEM260-207ENST00000555497 CTSFQ9UBX1 484 aa22.16■■□□□ 1.14
TMEM260-207ENST00000555497 ITGB1BP2Q9UKP3 347 aa22.16■■□□□ 1.14
TMEM260-207ENST00000555497 ATXN7L1Q9ULK2 861 aaPredicted RBP22.16■■□□□ 1.14
TMEM260-207ENST00000555497 SIT1Q9Y3P8 196 aa22.16■■□□□ 1.14
TMEM260-207ENST00000555497 GRIP1Q9Y3R0 1128 aa22.16■■□□□ 1.14
TMEM260-207ENST00000555497 OR6C68A6NDL8 312 aa22.16■■□□□ 1.14
TMEM260-207ENST00000555497 PLPP2O43688 288 aa22.16■■□□□ 1.14
TMEM260-207ENST00000555497 PI4KAP42356 2102 aa22.16■■□□□ 1.14
TMEM260-207ENST00000555497 NR0B1P51843 470 aaKnown RBP22.16■■□□□ 1.14
TMEM260-207ENST00000555497 LTBQ06643 244 aa22.16■■□□□ 1.14
TMEM260-207ENST00000555497 SLC3A1Q07837 685 aa22.16■■□□□ 1.14
TMEM260-207ENST00000555497 FAM27D1Q5T7N8 215 aa22.16■■□□□ 1.14
TMEM260-207ENST00000555497 ZNF574Q6ZN55 896 aaPredicted RBP22.16■■□□□ 1.14
TMEM260-207ENST00000555497 SHISA6Q6ZSJ9 500 aa22.16■■□□□ 1.14
TMEM260-207ENST00000555497 LANCL3Q6ZV70 420 aa22.16■■□□□ 1.14
TMEM260-207ENST00000555497 CELF2-AS1Q8N7Q2 184 aa22.16■■□□□ 1.14
TMEM260-207ENST00000555497 SLC22A11Q9NSA0 550 aa22.16■■□□□ 1.14
TMEM260-207ENST00000555497 HPGDSO60760 199 aa22.15■■□□□ 1.14
TMEM260-207ENST00000555497 PNMTP11086 282 aa22.15■■□□□ 1.14
TMEM260-207ENST00000555497 AQP2P41181 271 aa22.15■■□□□ 1.14
TMEM260-207ENST00000555497 NAA10P41227 235 aaPredicted RBP22.15■■□□□ 1.14
TMEM260-207ENST00000555497 ZNF74Q16587 644 aa22.15■■□□□ 1.14
TMEM260-207ENST00000555497 COLQQ9Y215 455 aaPredicted RBP22.15■■□□□ 1.14
TMEM260-207ENST00000555497 ARPC3O15145 178 aa22.15■■□□□ 1.14
TMEM260-207ENST00000555497 WISP1O95388 367 aa22.15■■□□□ 1.14
TMEM260-207ENST00000555497 ZNF117Q03924 483 aa22.15■■□□□ 1.14
TMEM260-207ENST00000555497 XKRXQ6PP77 449 aa22.15■■□□□ 1.14
TMEM260-207ENST00000555497 GPALPP1Q8IXQ4 340 aa22.15■■□□□ 1.14
TMEM260-207ENST00000555497 OIT3Q8WWZ8 545 aa22.15■■□□□ 1.14
TMEM260-207ENST00000555497 TMEM43Q9BTV4 400 aa22.15■■□□□ 1.14
TMEM260-207ENST00000555497 ZNF768Q9H5H4 540 aaKnown RBP22.15■■□□□ 1.14
TMEM260-207ENST00000555497 A0A1W2PQ09 198 aa22.14■■□□□ 1.14
TMEM260-207ENST00000555497 BLOC1S5-TXNDC5H3BN57 136 aa22.14■■□□□ 1.14
TMEM260-207ENST00000555497 SHC1P29353 583 aa22.14■■□□□ 1.14
TMEM260-207ENST00000555497 PYCR1P32322 319 aa22.14■■□□□ 1.14
TMEM260-207ENST00000555497 ACVR1BP36896 505 aa22.14■■□□□ 1.14
TMEM260-207ENST00000555497 POU4F2Q12837 409 aa22.14■■□□□ 1.14
TMEM260-207ENST00000555497 TP53I3Q53FA7 332 aa22.14■■□□□ 1.14
TMEM260-207ENST00000555497 LYPD4Q6UWN0 246 aa22.14■■□□□ 1.14
TMEM260-207ENST00000555497 COX15Q7KZN9 410 aa22.14■■□□□ 1.14
TMEM260-207ENST00000555497 MARCH3Q86UD3 253 aa22.14■■□□□ 1.14
TMEM260-207ENST00000555497 KMT5CQ86Y97 462 aa22.14■■□□□ 1.14
TMEM260-207ENST00000555497 HPS1Q92902 700 aa22.14■■□□□ 1.14
TMEM260-207ENST00000555497 PGLYRP3Q96LB9 341 aa22.14■■□□□ 1.14
TMEM260-207ENST00000555497 LRFN5Q96NI6 719 aa22.14■■□□□ 1.14
TMEM260-207ENST00000555497 NMNAT2Q9BZQ4 307 aa22.14■■□□□ 1.14
TMEM260-207ENST00000555497 WWTR1Q9GZV5 400 aa22.14■■□□□ 1.14
TMEM260-207ENST00000555497 TSPAN2O60636 221 aa22.14■■□□□ 1.13
TMEM260-207ENST00000555497 RFX2P48378 723 aa22.14■■□□□ 1.13
TMEM260-207ENST00000555497 ACTC1P68032 377 aa22.14■■□□□ 1.13
TMEM260-207ENST00000555497 ACTA1P68133 377 aa22.14■■□□□ 1.13
TMEM260-207ENST00000555497 KRR1Q13601 381 aaKnown RBP22.14■■□□□ 1.13
TMEM260-207ENST00000555497 GGTLC2Q14390 218 aa22.14■■□□□ 1.13
TMEM260-207ENST00000555497 TOMM34Q15785 309 aaPredicted RBP22.14■■□□□ 1.13
TMEM260-207ENST00000555497 NRARPQ7Z6K4 114 aa22.14■■□□□ 1.13
TMEM260-207ENST00000555497 C10orf53Q8N6V4 93 aa22.14■■□□□ 1.13
TMEM260-207ENST00000555497 LRRC75AQ8NAA5 344 aa22.14■■□□□ 1.13
TMEM260-207ENST00000555497 KTI12Q96EK9 354 aaPredicted RBP22.14■■□□□ 1.13
TMEM260-207ENST00000555497 Q96M85 177 aa22.14■■□□□ 1.13
TMEM260-207ENST00000555497 NEDD4LQ96PU5 975 aa22.14■■□□□ 1.13
TMEM260-207ENST00000555497 MESP1Q9BRJ9 268 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms