RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 PLEKHF2Q9H8W4 249 aa12.12□□□□□ -0.47
SNX6-203ENST00000555416 CACYBPQ9HB71 228 aaKnown RBP12.12□□□□□ -0.47
SNX6-203ENST00000555416 NDRG3Q9UGV2 375 aa12.12□□□□□ -0.47
SNX6-203ENST00000555416 ANGPT4Q9Y264 503 aa12.12□□□□□ -0.47
SNX6-203ENST00000555416 CAPN7Q9Y6W3 813 aa12.12□□□□□ -0.47
SNX6-203ENST00000555416 CELSR1Q9NYQ6 3014 aa12.11□□□□□ -0.47
SNX6-203ENST00000555416 IGKV1D-42A0A075B6H8 117 aa12.11□□□□□ -0.47
SNX6-203ENST00000555416 M0R3H8 397 aa12.11□□□□□ -0.47
SNX6-203ENST00000555416 AKR7A3O95154 331 aa12.11□□□□□ -0.47
SNX6-203ENST00000555416 ADAP00813 363 aa12.11□□□□□ -0.47
SNX6-203ENST00000555416 IGHV3-9P01782 118 aa12.11□□□□□ -0.47
SNX6-203ENST00000555416 CD247P20963 164 aa12.11□□□□□ -0.47
SNX6-203ENST00000555416 PTNP21246 168 aa12.11□□□□□ -0.47
SNX6-203ENST00000555416 DRD4P21917 467 aa12.11□□□□□ -0.47
SNX6-203ENST00000555416 FKBP2P26885 142 aaKnown RBP12.11□□□□□ -0.47
SNX6-203ENST00000555416 ADSLP30566 484 aaPredicted RBP12.11□□□□□ -0.47
SNX6-203ENST00000555416 PCGF2P35227 344 aa12.11□□□□□ -0.47
SNX6-203ENST00000555416 IDUAP35475 653 aa12.11□□□□□ -0.47
SNX6-203ENST00000555416 OR3A2P47893 321 aa12.11□□□□□ -0.47
SNX6-203ENST00000555416 P2RY4P51582 365 aa12.11□□□□□ -0.47
SNX6-203ENST00000555416 COPZ1P61923 177 aa12.11□□□□□ -0.47
SNX6-203ENST00000555416 RBBP4Q09028 425 aa12.11□□□□□ -0.47
SNX6-203ENST00000555416 CYLC2Q14093 348 aaPredicted RBP12.11□□□□□ -0.47
SNX6-203ENST00000555416 OR7A5Q15622 319 aa12.11□□□□□ -0.47
SNX6-203ENST00000555416 NPTX1Q15818 432 aa12.11□□□□□ -0.47
SNX6-203ENST00000555416 C1orf140Q5VVS0 124 aa12.11□□□□□ -0.47
SNX6-203ENST00000555416 BEND4Q6ZU67 534 aa12.11□□□□□ -0.47
SNX6-203ENST00000555416 TSPYL5Q86VY4 417 aaPredicted RBP12.11□□□□□ -0.47
SNX6-203ENST00000555416 RBM45Q8IUH3 476 aaKnown RBP12.11□□□□□ -0.47
SNX6-203ENST00000555416 SLC35B4Q969S0 331 aa12.11□□□□□ -0.47
SNX6-203ENST00000555416 RCN3Q96D15 328 aa12.11□□□□□ -0.47
SNX6-203ENST00000555416 ZNF607Q96SK3 696 aa12.11□□□□□ -0.47
SNX6-203ENST00000555416 PTDSS2Q9BVG9 487 aa12.11□□□□□ -0.47
SNX6-203ENST00000555416 ACTR6Q9GZN1 396 aa12.11□□□□□ -0.47
SNX6-203ENST00000555416 ARMC7Q9H6L4 198 aa12.11□□□□□ -0.47
SNX6-203ENST00000555416 CCT8L1PA6NM43 557 aa12.1□□□□□ -0.47
SNX6-203ENST00000555416 BBIP1A8MTZ0 92 aa12.1□□□□□ -0.47
SNX6-203ENST00000555416 A8MVM7 634 aa12.1□□□□□ -0.47
SNX6-203ENST00000555416 KLF4O43474 513 aa12.1□□□□□ -0.47
SNX6-203ENST00000555416 DNPH1O43598 174 aa12.1□□□□□ -0.47
SNX6-203ENST00000555416 PSMB1P20618 241 aaKnown RBP12.1□□□□□ -0.47
SNX6-203ENST00000555416 CRYGSP22914 178 aa12.1□□□□□ -0.47
SNX6-203ENST00000555416 SLC16A1P53985 500 aa12.1□□□□□ -0.47
SNX6-203ENST00000555416 FOXG1P55316 489 aaPredicted RBP12.1□□□□□ -0.47
SNX6-203ENST00000555416 SLC35A1P78382 337 aa12.1□□□□□ -0.47
SNX6-203ENST00000555416 SLC17A1Q14916 467 aa12.1□□□□□ -0.47
SNX6-203ENST00000555416 PDK3Q15120 406 aa12.1□□□□□ -0.47
SNX6-203ENST00000555416 TESK1Q15569 626 aa12.1□□□□□ -0.47
SNX6-203ENST00000555416 VMACQ2NL98 169 aa12.1□□□□□ -0.47
SNX6-203ENST00000555416 MMEL1Q495T6 779 aa12.1□□□□□ -0.47
SNX6-203ENST00000555416 COQ5Q5HYK3 327 aa12.1□□□□□ -0.47
SNX6-203ENST00000555416 C6orf89Q6UWU4 347 aa12.1□□□□□ -0.47
SNX6-203ENST00000555416 SPATA21Q7Z572 469 aa12.1□□□□□ -0.47
SNX6-203ENST00000555416 GALNT5Q7Z7M9 940 aa12.1□□□□□ -0.47
SNX6-203ENST00000555416 STK32CQ86UX6 486 aa12.1□□□□□ -0.47
SNX6-203ENST00000555416 LSMEM1Q8N8F7 131 aa12.1□□□□□ -0.47
SNX6-203ENST00000555416 ZIC4Q8N9L1 334 aa12.1□□□□□ -0.47
SNX6-203ENST00000555416 PIGXQ8TBF5 258 aa12.1□□□□□ -0.47
SNX6-203ENST00000555416 S100PBPQ96BU1 408 aa12.1□□□□□ -0.47
SNX6-203ENST00000555416 ZHX1-C8orf76Q96EF9 292 aa12.1□□□□□ -0.47
SNX6-203ENST00000555416 KTI12Q96EK9 354 aaPredicted RBP12.1□□□□□ -0.47
SNX6-203ENST00000555416 ZNF583Q96ND8 569 aa12.1□□□□□ -0.47
SNX6-203ENST00000555416 SPATA5L1Q9BVQ7 753 aa12.1□□□□□ -0.47
SNX6-203ENST00000555416 FAM107BQ9H098 131 aa12.1□□□□□ -0.47
SNX6-203ENST00000555416 ADPRHL2Q9NX46 363 aa12.1□□□□□ -0.47
SNX6-203ENST00000555416 SEC14L4Q9UDX3 406 aa12.1□□□□□ -0.47
SNX6-203ENST00000555416 PLEKHA6Q9Y2H5 1048 aa12.1□□□□□ -0.47
SNX6-203ENST00000555416 FLVCR1Q9Y5Y0 555 aa12.1□□□□□ -0.47
SNX6-203ENST00000555416 PRORSD1PA6NEY8 169 aa12.09□□□□□ -0.47
SNX6-203ENST00000555416 FTCDNL1E5RQL4 147 aa12.09□□□□□ -0.47
SNX6-203ENST00000555416 CASKO14936 926 aa12.09□□□□□ -0.47
SNX6-203ENST00000555416 SERPINB7O75635 380 aa12.09□□□□□ -0.47
SNX6-203ENST00000555416 LYZL6O75951 148 aa12.09□□□□□ -0.47
SNX6-203ENST00000555416 LGI1O95970 557 aa12.09□□□□□ -0.47
SNX6-203ENST00000555416 COX4I1P13073 169 aa12.09□□□□□ -0.47
SNX6-203ENST00000555416 IGHV1-2P23083 117 aa12.09□□□□□ -0.47
SNX6-203ENST00000555416 MAP2K6P52564 334 aa12.09□□□□□ -0.47
SNX6-203ENST00000555416 IST1P53990 364 aa12.09□□□□□ -0.47
SNX6-203ENST00000555416 RGS8P57771 180 aaPredicted RBP12.09□□□□□ -0.47
SNX6-203ENST00000555416 MAPRE2Q15555 327 aa12.09□□□□□ -0.47
SNX6-203ENST00000555416 OR1Q1Q15612 314 aa12.09□□□□□ -0.47
SNX6-203ENST00000555416 NRF1Q16656 503 aa12.09□□□□□ -0.47
SNX6-203ENST00000555416 OTUD3Q5T2D3 398 aaPredicted RBP12.09□□□□□ -0.47
SNX6-203ENST00000555416 SFRP5Q5T4F7 317 aa12.09□□□□□ -0.47
SNX6-203ENST00000555416 FBXW10Q5XX13 1052 aa12.09□□□□□ -0.47
SNX6-203ENST00000555416 PAQR6Q6TCH4 344 aa12.09□□□□□ -0.47
SNX6-203ENST00000555416 SEZ6L2Q6UXD5 910 aa12.09□□□□□ -0.47
SNX6-203ENST00000555416 Q6ZT83 130 aa12.09□□□□□ -0.47
SNX6-203ENST00000555416 OR8J3Q8NGG0 315 aa12.09□□□□□ -0.47
SNX6-203ENST00000555416 OR52E4Q8NGH9 312 aa12.09□□□□□ -0.47
SNX6-203ENST00000555416 OR6T1Q8NGN1 323 aa12.09□□□□□ -0.47
SNX6-203ENST00000555416 PIK3IP1Q96FE7 263 aa12.09□□□□□ -0.47
SNX6-203ENST00000555416 ARHGDIGQ99819 225 aa12.09□□□□□ -0.47
SNX6-203ENST00000555416 TACO1Q9BSH4 297 aaKnown RBP12.09□□□□□ -0.47
SNX6-203ENST00000555416 MYLK2Q9H1R3 596 aa12.09□□□□□ -0.47
SNX6-203ENST00000555416 ST6GALNAC2Q9UJ37 374 aa12.09□□□□□ -0.47
SNX6-203ENST00000555416 PRDM4Q9UKN5 801 aa12.09□□□□□ -0.47
SNX6-203ENST00000555416 GPR52Q9Y2T5 361 aa12.09□□□□□ -0.47
SNX6-203ENST00000555416 NOSIPQ9Y314 301 aaKnown RBP12.09□□□□□ -0.47
SNX6-203ENST00000555416 ROS1P08922 2347 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms