RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 IGHV1-2P23083 117 aa10.46□□□□□ -0.73
VRK1-204ENST00000555351 PRKAR1BP31321 381 aa10.46□□□□□ -0.73
VRK1-204ENST00000555351 SLC17A1Q14916 467 aa10.46□□□□□ -0.73
VRK1-204ENST00000555351 ZNF311Q5JNZ3 666 aa10.46□□□□□ -0.73
VRK1-204ENST00000555351 METTL21CQ5VZV1 264 aa10.46□□□□□ -0.73
VRK1-204ENST00000555351 C5orf46Q6UWT4 87 aa10.46□□□□□ -0.73
VRK1-204ENST00000555351 BIVMQ86UB2 503 aa10.46□□□□□ -0.73
VRK1-204ENST00000555351 KRT73Q86Y46 540 aa10.46□□□□□ -0.73
VRK1-204ENST00000555351 P3H2Q8IVL5 708 aa10.46□□□□□ -0.73
VRK1-204ENST00000555351 MSRB3Q8IXL7 192 aa10.46□□□□□ -0.73
VRK1-204ENST00000555351 CLIP4Q8N3C7 705 aa10.46□□□□□ -0.73
VRK1-204ENST00000555351 ZNF433Q8N7K0 673 aaPredicted RBP10.46□□□□□ -0.73
VRK1-204ENST00000555351 C1orf162Q8NEQ5 155 aaPredicted RBP10.46□□□□□ -0.73
VRK1-204ENST00000555351 WFDC11Q8NEX6 87 aa10.46□□□□□ -0.73
VRK1-204ENST00000555351 BHLHE22Q8NFJ8 381 aaPredicted RBP10.46□□□□□ -0.73
VRK1-204ENST00000555351 STK35Q8TDR2 534 aa10.46□□□□□ -0.73
VRK1-204ENST00000555351 TMEM171Q8WVE6 324 aa10.46□□□□□ -0.73
VRK1-204ENST00000555351 BOD1Q96IK1 185 aa10.46□□□□□ -0.73
VRK1-204ENST00000555351 RADILQ96JH8 1075 aa10.46□□□□□ -0.73
VRK1-204ENST00000555351 SPATA5L1Q9BVQ7 753 aa10.46□□□□□ -0.73
VRK1-204ENST00000555351 GRIP2Q9C0E4 1043 aa10.46□□□□□ -0.73
VRK1-204ENST00000555351 CXorf56Q9H5V9 222 aa10.46□□□□□ -0.73
VRK1-204ENST00000555351 ASB6Q9NWX5 421 aa10.46□□□□□ -0.73
VRK1-204ENST00000555351 TAS2R16Q9NYV7 291 aa10.46□□□□□ -0.73
VRK1-204ENST00000555351 DCTN4Q9UJW0 460 aa10.46□□□□□ -0.73
VRK1-204ENST00000555351 TRIM33Q9UPN9 1127 aa10.46□□□□□ -0.73
VRK1-204ENST00000555351 CHST2Q9Y4C5 530 aa10.46□□□□□ -0.73
VRK1-204ENST00000555351 MAP1AP78559 2803 aaPredicted RBP10.45□□□□□ -0.74
VRK1-204ENST00000555351 PRORSD1PA6NEY8 169 aa10.45□□□□□ -0.74
VRK1-204ENST00000555351 AQP7P3A6NL99 342 aa10.45□□□□□ -0.74
VRK1-204ENST00000555351 FAM171A2A8MVW0 826 aa10.45□□□□□ -0.74
VRK1-204ENST00000555351 EVPLLA8MZ36 301 aa10.45□□□□□ -0.74
VRK1-204ENST00000555351 FZD7O75084 574 aa10.45□□□□□ -0.74
VRK1-204ENST00000555351 NPIPB7O75200 414 aa10.45□□□□□ -0.74
VRK1-204ENST00000555351 NCF2P19878 526 aaPredicted RBP10.45□□□□□ -0.74
VRK1-204ENST00000555351 CCNA2P20248 432 aa10.45□□□□□ -0.74
VRK1-204ENST00000555351 PAX7P23759 505 aa10.45□□□□□ -0.74
VRK1-204ENST00000555351 PPA1Q15181 289 aa10.45□□□□□ -0.74
VRK1-204ENST00000555351 KRTAP21-3Q3LHN1 58 aa10.45□□□□□ -0.74
VRK1-204ENST00000555351 GCNT6Q5T4J0 391 aa10.45□□□□□ -0.74
VRK1-204ENST00000555351 REEP3Q6NUK4 255 aa10.45□□□□□ -0.74
VRK1-204ENST00000555351 DHRS4L2Q6PKH6 230 aa10.45□□□□□ -0.74
VRK1-204ENST00000555351 C6orf89Q6UWU4 347 aa10.45□□□□□ -0.74
VRK1-204ENST00000555351 CCDC103Q8IW40 242 aa10.45□□□□□ -0.74
VRK1-204ENST00000555351 C17orf78Q8N4C9 275 aa10.45□□□□□ -0.74
VRK1-204ENST00000555351 DPP10Q8N608 796 aa10.45□□□□□ -0.74
VRK1-204ENST00000555351 LSMEM1Q8N8F7 131 aa10.45□□□□□ -0.74
VRK1-204ENST00000555351 C18orf12Q96KH6 178 aa10.45□□□□□ -0.74
VRK1-204ENST00000555351 MUS81Q96NY9 551 aa10.45□□□□□ -0.74
VRK1-204ENST00000555351 AMBRA1Q9C0C7 1298 aa10.45□□□□□ -0.74
VRK1-204ENST00000555351 VAPAQ9P0L0 249 aa10.45□□□□□ -0.74
VRK1-204ENST00000555351 FLVCR1Q9Y5Y0 555 aa10.45□□□□□ -0.74
VRK1-204ENST00000555351 FREM1Q5H8C1 2179 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 ZC3H12DA2A288 527 aaKnown RBP10.44□□□□□ -0.74
VRK1-204ENST00000555351 OR6C65A6NJZ3 312 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 TMEM229AB2RXF0 380 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 PDLIM1O00151 329 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 NR5A2O00482 541 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 EDF1O60869 148 aaKnown RBP10.44□□□□□ -0.74
VRK1-204ENST00000555351 LYZL6O75951 148 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 NUDT7P0C024 238 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 GKN3PP0CG01 181 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 EDNRAP25101 427 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 NTF4P34130 210 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 CDK6Q00534 326 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 TGFBR3Q03167 851 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 RBBP4Q09028 425 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 CEACAM7Q14002 265 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 ETFDHQ16134 617 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 ZNF672Q499Z4 452 aaPredicted RBP10.44□□□□□ -0.74
VRK1-204ENST00000555351 AGKQ53H12 422 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 RPS26P11Q5JNZ5 115 aaPredicted RBP10.44□□□□□ -0.74
VRK1-204ENST00000555351 PAGE3Q5JUK9 113 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 Q5PR19 223 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 OTUD3Q5T2D3 398 aaPredicted RBP10.44□□□□□ -0.74
VRK1-204ENST00000555351 C1orf140Q5VVS0 124 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 DLEU7Q6UYE1 221 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 ABHD12BQ7Z5M8 362 aaPredicted RBP10.44□□□□□ -0.74
VRK1-204ENST00000555351 ATG4DQ86TL0 474 aaPredicted RBP10.44□□□□□ -0.74
VRK1-204ENST00000555351 SERPINA11Q86U17 422 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 UBE2J2Q8N2K1 259 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 CADM2Q8N3J6 435 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 POMGNT2Q8NAT1 580 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 MFSD8Q8NHS3 518 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 AKAP1Q92667 903 aaKnown RBP eCLIP10.44□□□□□ -0.74
VRK1-204ENST00000555351 MAL2Q969L2 176 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 FBXW5Q969U6 566 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 C3orf49Q96BT1 292 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 ZNF775Q96BV0 537 aaPredicted RBP10.44□□□□□ -0.74
VRK1-204ENST00000555351 ZNF607Q96SK3 696 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 BDH2Q9BUT1 245 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 TAPBPLQ9BX59 468 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 TRIM2Q9C040 744 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 ZNF385DQ9H6B1 395 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 SLAMF8Q9P0V8 285 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 LEF1Q9UJU2 399 aaPredicted RBP10.44□□□□□ -0.74
VRK1-204ENST00000555351 MGAT4BQ9UQ53 548 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 RASD1Q9Y272 281 aa10.44□□□□□ -0.74
VRK1-204ENST00000555351 FLNAP21333 2647 aaKnown RBP10.44□□□□□ -0.74
VRK1-204ENST00000555351 DSCAMO60469 2012 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms