RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 C1QL3Q5VWW1 255 aa12.81□□□□□ -0.36
CHD8-208ENST00000555301 TMEM211Q6ICI0 200 aa12.81□□□□□ -0.36
CHD8-208ENST00000555301 RRM2BQ7LG56 351 aa12.81□□□□□ -0.36
CHD8-208ENST00000555301 RNF113BQ8IZP6 322 aaKnown RBP12.81□□□□□ -0.36
CHD8-208ENST00000555301 MFSD8Q8NHS3 518 aa12.81□□□□□ -0.36
CHD8-208ENST00000555301 TMEM255BQ8WV15 326 aa12.81□□□□□ -0.36
CHD8-208ENST00000555301 ACOT11Q8WXI4 607 aaPredicted RBP12.81□□□□□ -0.36
CHD8-208ENST00000555301 WNT2BQ93097 391 aa12.81□□□□□ -0.36
CHD8-208ENST00000555301 RELTQ969Z4 430 aa12.81□□□□□ -0.36
CHD8-208ENST00000555301 KTI12Q96EK9 354 aaPredicted RBP12.81□□□□□ -0.36
CHD8-208ENST00000555301 ZNF845Q96IR2 970 aaPredicted RBP12.81□□□□□ -0.36
CHD8-208ENST00000555301 VKORC1Q9BQB6 163 aa12.81□□□□□ -0.36
CHD8-208ENST00000555301 PRRG4Q9BZD6 226 aa12.81□□□□□ -0.36
CHD8-208ENST00000555301 MAN2C1Q9NTJ4 1040 aa12.81□□□□□ -0.36
CHD8-208ENST00000555301 MED31Q9Y3C7 131 aa12.81□□□□□ -0.36
CHD8-208ENST00000555301 TESMINQ9Y4I5 508 aa12.81□□□□□ -0.36
CHD8-208ENST00000555301 NCKAP5O14513 1909 aa12.8□□□□□ -0.36
CHD8-208ENST00000555301 LIPT2A6NK58 231 aa12.8□□□□□ -0.36
CHD8-208ENST00000555301 SLC22A20A6NK97 555 aa12.8□□□□□ -0.36
CHD8-208ENST00000555301 CST1P01037 141 aa12.8□□□□□ -0.36
CHD8-208ENST00000555301 MT-ND1P03886 318 aa12.8□□□□□ -0.36
CHD8-208ENST00000555301 IMPDH2P12268 514 aa12.8□□□□□ -0.36
CHD8-208ENST00000555301 FPR1P21462 350 aa12.8□□□□□ -0.36
CHD8-208ENST00000555301 ENPP1P22413 925 aa12.8□□□□□ -0.36
CHD8-208ENST00000555301 GTF2E2P29084 291 aaKnown RBP12.8□□□□□ -0.36
CHD8-208ENST00000555301 RPS5P46782 204 aaKnown RBP12.8□□□□□ -0.36
CHD8-208ENST00000555301 AGFG1P52594 562 aaKnown RBP12.8□□□□□ -0.36
CHD8-208ENST00000555301 OR2B6P58173 313 aa12.8□□□□□ -0.36
CHD8-208ENST00000555301 FOXD4Q12950 439 aaPredicted RBP12.8□□□□□ -0.36
CHD8-208ENST00000555301 GK3PQ14409 553 aa12.8□□□□□ -0.36
CHD8-208ENST00000555301 OR7A5Q15622 319 aa12.8□□□□□ -0.36
CHD8-208ENST00000555301 ZNF239Q16600 458 aaKnown RBP12.8□□□□□ -0.36
CHD8-208ENST00000555301 FGD3Q5JSP0 725 aa12.8□□□□□ -0.36
CHD8-208ENST00000555301 RTL6Q6ICC9 239 aa12.8□□□□□ -0.36
CHD8-208ENST00000555301 OR2T5Q6IEZ7 315 aa12.8□□□□□ -0.36
CHD8-208ENST00000555301 MTFR2Q6P444 385 aa12.8□□□□□ -0.36
CHD8-208ENST00000555301 RPTNQ6XPR3 784 aa12.8□□□□□ -0.36
CHD8-208ENST00000555301 C3P1Q6ZMU1 363 aa12.8□□□□□ -0.36
CHD8-208ENST00000555301 ZNF730Q6ZMV8 503 aa12.8□□□□□ -0.36
CHD8-208ENST00000555301 P4HA3Q7Z4N8 544 aa12.8□□□□□ -0.36
CHD8-208ENST00000555301 OR2T29Q8NH02 315 aa12.8□□□□□ -0.36
CHD8-208ENST00000555301 SLC7A13Q8TCU3 470 aa12.8□□□□□ -0.36
CHD8-208ENST00000555301 SLCO4A1Q96BD0 722 aa12.8□□□□□ -0.36
CHD8-208ENST00000555301 TM9SF2Q99805 663 aa12.8□□□□□ -0.36
CHD8-208ENST00000555301 TTYH2Q9BSA4 534 aa12.8□□□□□ -0.36
CHD8-208ENST00000555301 PTDSS2Q9BVG9 487 aa12.8□□□□□ -0.36
CHD8-208ENST00000555301 SRXN1Q9BYN0 137 aa12.8□□□□□ -0.36
CHD8-208ENST00000555301 DENND2DQ9H6A0 471 aaPredicted RBP12.8□□□□□ -0.36
CHD8-208ENST00000555301 ARMC1Q9NVT9 282 aa12.8□□□□□ -0.36
CHD8-208ENST00000555301 CLCF1Q9UBD9 225 aa12.8□□□□□ -0.36
CHD8-208ENST00000555301 MEMO1Q9Y316 297 aa12.8□□□□□ -0.36
CHD8-208ENST00000555301 AP4S1Q9Y587 144 aa12.8□□□□□ -0.36
CHD8-208ENST00000555301 FAM215AQ9Y5M1 114 aa12.8□□□□□ -0.36
CHD8-208ENST00000555301 A0A087WUU8 490 aa12.79□□□□□ -0.36
CHD8-208ENST00000555301 MBD3L4A6NDZ8 208 aaPredicted RBP12.79□□□□□ -0.36
CHD8-208ENST00000555301 MBD3L3A6NE82 208 aaPredicted RBP12.79□□□□□ -0.36
CHD8-208ENST00000555301 MBD3L5A6NJ08 208 aaPredicted RBP12.79□□□□□ -0.36
CHD8-208ENST00000555301 FTCDNL1E5RQL4 147 aa12.79□□□□□ -0.36
CHD8-208ENST00000555301 CCL21O00585 134 aa12.79□□□□□ -0.36
CHD8-208ENST00000555301 KPNA4O00629 521 aaPredicted RBP12.79□□□□□ -0.36
CHD8-208ENST00000555301 GNGT2O14610 69 aa12.79□□□□□ -0.36
CHD8-208ENST00000555301 HNRNPRO43390 633 aaKnown RBP12.79□□□□□ -0.36
CHD8-208ENST00000555301 MT-ATP6P00846 226 aa12.79□□□□□ -0.36
CHD8-208ENST00000555301 PLA2G2AP14555 144 aa12.79□□□□□ -0.36
CHD8-208ENST00000555301 TIMP3P35625 211 aa12.79□□□□□ -0.36
CHD8-208ENST00000555301 HMGA2P52926 109 aa12.79□□□□□ -0.36
CHD8-208ENST00000555301 UGT2B15P54855 530 aa12.79□□□□□ -0.36
CHD8-208ENST00000555301 C4orf17Q53FE4 359 aa12.79□□□□□ -0.36
CHD8-208ENST00000555301 GTF2IRD2BQ6EKJ0 949 aa12.79□□□□□ -0.36
CHD8-208ENST00000555301 OR2A2Q6IF42 318 aa12.79□□□□□ -0.36
CHD8-208ENST00000555301 PPP4R4Q6NUP7 873 aa12.79□□□□□ -0.36
CHD8-208ENST00000555301 ZFP1Q6P2D0 407 aa12.79□□□□□ -0.36
CHD8-208ENST00000555301 PAQR6Q6TCH4 344 aa12.79□□□□□ -0.36
CHD8-208ENST00000555301 MBOAT2Q6ZWT7 520 aa12.79□□□□□ -0.36
CHD8-208ENST00000555301 GTF2IRD2Q86UP8 949 aa12.79□□□□□ -0.36
CHD8-208ENST00000555301 P3H2Q8IVL5 708 aa12.79□□□□□ -0.36
CHD8-208ENST00000555301 CDK20Q8IZL9 346 aa12.79□□□□□ -0.36
CHD8-208ENST00000555301 SLC43A2Q8N370 569 aa12.79□□□□□ -0.36
CHD8-208ENST00000555301 C10orf53Q8N6V4 93 aa12.79□□□□□ -0.36
CHD8-208ENST00000555301 OR52J3Q8NH60 311 aa12.79□□□□□ -0.36
CHD8-208ENST00000555301 MBD3L2Q8NHZ7 208 aaPredicted RBP12.79□□□□□ -0.36
CHD8-208ENST00000555301 FNDC9Q8TBE3 224 aa12.79□□□□□ -0.36
CHD8-208ENST00000555301 TAAR8Q969N4 342 aa12.79□□□□□ -0.36
CHD8-208ENST00000555301 SLC25A36Q96CQ1 311 aa12.79□□□□□ -0.36
CHD8-208ENST00000555301 DNAJA3Q96EY1 480 aa12.79□□□□□ -0.36
CHD8-208ENST00000555301 ALPK1Q96QP1 1244 aa12.79□□□□□ -0.36
CHD8-208ENST00000555301 NAA11Q9BSU3 229 aaPredicted RBP12.79□□□□□ -0.36
CHD8-208ENST00000555301 REEP1Q9H902 201 aa12.79□□□□□ -0.36
CHD8-208ENST00000555301 KRCC1Q9NPI7 259 aaPredicted RBP12.79□□□□□ -0.36
CHD8-208ENST00000555301 MEPEQ9NQ76 525 aaPredicted RBP12.79□□□□□ -0.36
CHD8-208ENST00000555301 TMCC3Q9ULS5 477 aa12.79□□□□□ -0.36
CHD8-208ENST00000555301 CORINQ9Y5Q5 1042 aa12.79□□□□□ -0.36
CHD8-208ENST00000555301 CFAP46Q8IYW2 2715 aa12.78□□□□□ -0.36
CHD8-208ENST00000555301 ENO4A6NNW6 628 aa12.78□□□□□ -0.36
CHD8-208ENST00000555301 J3QKU1 62 aa12.78□□□□□ -0.36
CHD8-208ENST00000555301 TNFRSF11BO00300 401 aa12.78□□□□□ -0.36
CHD8-208ENST00000555301 RRP9O43818 475 aaKnown RBP12.78□□□□□ -0.36
CHD8-208ENST00000555301 FZD7O75084 574 aa12.78□□□□□ -0.36
CHD8-208ENST00000555301 IL2RAP01589 272 aa12.78□□□□□ -0.36
CHD8-208ENST00000555301 FCGR1AP12314 374 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms