RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 IL4I1Q96RQ9 567 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 MCHR1Q99705 422 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 PELOQ9BRX2 385 aaKnown RBP10.16□□□□□ -0.78
SHMT2-216ENST00000554975 TAPBPLQ9BX59 468 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 ZNF350Q9GZX5 532 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 SP140LQ9H930 580 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 WDR54Q9H977 334 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 FGF20Q9NP95 211 aaPredicted RBP10.16□□□□□ -0.78
SHMT2-216ENST00000554975 MAN2C1Q9NTJ4 1040 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 NDUFB11Q9NX14 153 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 DNAJC27Q9NZQ0 273 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 TNFRSF10DQ9UBN6 386 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 NXT1Q9UKK6 140 aaKnown RBP10.16□□□□□ -0.78
SHMT2-216ENST00000554975 STUB1Q9UNE7 303 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 CDH10Q9Y6N8 788 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 DNAJC13O75165 2243 aa10.16□□□□□ -0.78
SHMT2-216ENST00000554975 A0A0A6YYC8 382 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-216ENST00000554975 LOC100506127A0A0U1RQW1 187 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 TRAPPC13A5PLN9 417 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 TMEM200CA6NKL6 621 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 KDM4EB2RXH2 506 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-216ENST00000554975 FAM227AF5H4B4 570 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 LOC110117498-PIK3R3F6TDL0 507 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 I3L1I5 382 aaPredicted RBP10.15□□□□□ -0.78
SHMT2-216ENST00000554975 KIAA0513O60268 411 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 ONECUT2O95948 504 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 HNRNPCP07910 306 aaKnown RBP eCLIP10.15□□□□□ -0.78
SHMT2-216ENST00000554975 HSMCR30P0CW71 290 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 C8orf89P0DMQ9 161 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 BMP4P12644 408 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 TNNI3P19429 210 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 RPS4Y1P22090 263 aaKnown RBP10.15□□□□□ -0.78
SHMT2-216ENST00000554975 ETV6P41212 452 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 AVPR1BP47901 424 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 GIPRP48546 466 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 PSMD4P55036 377 aaKnown RBP10.15□□□□□ -0.78
SHMT2-216ENST00000554975 CHRNEQ04844 493 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 RUNX1T1Q06455 604 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 ITGADQ13349 1161 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 GINS1Q14691 196 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 SNAPC1Q16533 368 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.15□□□□□ -0.78
SHMT2-216ENST00000554975 DEFB134Q4QY38 66 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 SYT14P1Q58G82 188 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 ZNF628Q5EBL2 1059 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 SPANXN2Q5MJ10 180 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 GARNL3Q5VVW2 1013 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 TMEM236Q5W0B7 351 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 FAM111BQ6SJ93 734 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 MBOAT2Q6ZWT7 520 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 ZER1Q7Z7L7 766 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 KCT2Q8NC54 265 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 STT3BQ8TCJ2 826 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 NANOS1Q8WY41 292 aaKnown RBP10.15□□□□□ -0.78
SHMT2-216ENST00000554975 PIK3R3Q92569 461 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 HAS2Q92819 552 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 RPL3LQ92901 407 aaKnown RBP10.15□□□□□ -0.78
SHMT2-216ENST00000554975 CEP19Q96LK0 163 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 MDFIQ99750 246 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 MACROD1Q9BQ69 325 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 YIPF4Q9BSR8 244 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 CRB3Q9BUF7 120 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 CCDC32Q9BV29 185 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 CXXC4Q9H2H0 198 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 FN3KQ9H479 309 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 SYNPO2LQ9H987 977 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 AMBNQ9NP70 447 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 DLL4Q9NR61 685 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 TVP23BQ9NYZ1 205 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 SELENONQ9NZV5 590 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 KCMF1Q9P0J7 381 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 SSR3Q9UNL2 185 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 BAIAP2Q9UQB8 552 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 ZNF835Q9Y2P0 537 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 MEMO1Q9Y316 297 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 UGT2A1Q9Y4X1 527 aa10.15□□□□□ -0.78
SHMT2-216ENST00000554975 A0A087WUU8 490 aa10.14□□□□□ -0.79
SHMT2-216ENST00000554975 FAM221AA4D161 298 aa10.14□□□□□ -0.79
SHMT2-216ENST00000554975 AGAP5A6NIR3 686 aa10.14□□□□□ -0.79
SHMT2-216ENST00000554975 GALR3O60755 368 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-216ENST00000554975 UPK1BO75841 260 aa10.14□□□□□ -0.79
SHMT2-216ENST00000554975 SNX4O95219 450 aa10.14□□□□□ -0.79
SHMT2-216ENST00000554975 GPR75O95800 540 aa10.14□□□□□ -0.79
SHMT2-216ENST00000554975 WDPCPO95876 746 aa10.14□□□□□ -0.79
SHMT2-216ENST00000554975 PTTG1O95997 202 aa10.14□□□□□ -0.79
SHMT2-216ENST00000554975 HPP00738 406 aa10.14□□□□□ -0.79
SHMT2-216ENST00000554975 ZGLP1P0C6A0 271 aa10.14□□□□□ -0.79
SHMT2-216ENST00000554975 NID1P14543 1247 aa10.14□□□□□ -0.79
SHMT2-216ENST00000554975 NT5EP21589 574 aa10.14□□□□□ -0.79
SHMT2-216ENST00000554975 GRK5P34947 590 aa10.14□□□□□ -0.79
SHMT2-216ENST00000554975 RANBP1P43487 201 aa10.14□□□□□ -0.79
SHMT2-216ENST00000554975 BCAP31P51572 246 aa10.14□□□□□ -0.79
SHMT2-216ENST00000554975 WNT4P56705 351 aa10.14□□□□□ -0.79
SHMT2-216ENST00000554975 POU6F2P78424 691 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-216ENST00000554975 DUSP2Q05923 314 aa10.14□□□□□ -0.79
SHMT2-216ENST00000554975 ZNF155Q12901 538 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-216ENST00000554975 FOXD4Q12950 439 aaPredicted RBP10.14□□□□□ -0.79
SHMT2-216ENST00000554975 DSG2Q14126 1118 aa10.14□□□□□ -0.79
SHMT2-216ENST00000554975 OXA1LQ15070 435 aa10.14□□□□□ -0.79
SHMT2-216ENST00000554975 LTB4RQ15722 352 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms