RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 HOXB9P17482 250 aaPredicted RBP7.73□□□□□ -1.17
ACTN1-213ENST00000554508 CXCR1P25024 350 aa7.73□□□□□ -1.17
ACTN1-213ENST00000554508 ADSLP30566 484 aaPredicted RBP7.73□□□□□ -1.17
ACTN1-213ENST00000554508 HOXC12P31275 282 aa7.73□□□□□ -1.17
ACTN1-213ENST00000554508 ACAA2P42765 397 aaKnown RBP7.73□□□□□ -1.17
ACTN1-213ENST00000554508 RIPPLY3P57055 190 aa7.73□□□□□ -1.17
ACTN1-213ENST00000554508 H3F3AP84243 136 aa7.73□□□□□ -1.17
ACTN1-213ENST00000554508 CYLC2Q14093 348 aaPredicted RBP7.73□□□□□ -1.17
ACTN1-213ENST00000554508 GTDC1Q4AE62 458 aa7.73□□□□□ -1.17
ACTN1-213ENST00000554508 ZNF311Q5JNZ3 666 aa7.73□□□□□ -1.17
ACTN1-213ENST00000554508 WBP2NLQ6ICG8 309 aa7.73□□□□□ -1.17
ACTN1-213ENST00000554508 ZNF836Q6ZNA1 936 aa7.73□□□□□ -1.17
ACTN1-213ENST00000554508 P2RY8Q86VZ1 359 aa7.73□□□□□ -1.17
ACTN1-213ENST00000554508 ANKS4BQ8N8V4 417 aa7.73□□□□□ -1.17
ACTN1-213ENST00000554508 BBS10Q8TAM1 723 aa7.73□□□□□ -1.17
ACTN1-213ENST00000554508 TSPEARQ8WU66 669 aa7.73□□□□□ -1.17
ACTN1-213ENST00000554508 KISS1RQ969F8 398 aaPredicted RBP7.73□□□□□ -1.17
ACTN1-213ENST00000554508 ZNF775Q96BV0 537 aaPredicted RBP7.73□□□□□ -1.17
ACTN1-213ENST00000554508 AURKBQ96GD4 344 aaPredicted RBP7.73□□□□□ -1.17
ACTN1-213ENST00000554508 PLPPR2Q96GM1 343 aa7.73□□□□□ -1.17
ACTN1-213ENST00000554508 LRRC37BQ96QE4 947 aa7.73□□□□□ -1.17
ACTN1-213ENST00000554508 HS3ST6Q96QI5 342 aa7.73□□□□□ -1.17
ACTN1-213ENST00000554508 ZNF300Q96RE9 604 aaPredicted RBP7.73□□□□□ -1.17
ACTN1-213ENST00000554508 OR11A1Q9GZK7 315 aa7.73□□□□□ -1.17
ACTN1-213ENST00000554508 MYLK2Q9H1R3 596 aa7.73□□□□□ -1.17
ACTN1-213ENST00000554508 ESRP2Q9H6T0 727 aaKnown RBP7.73□□□□□ -1.17
ACTN1-213ENST00000554508 UBTD1Q9HAC8 227 aa7.73□□□□□ -1.17
ACTN1-213ENST00000554508 A4GALTQ9NPC4 353 aa7.73□□□□□ -1.17
ACTN1-213ENST00000554508 SLC52A3Q9NQ40 469 aa7.73□□□□□ -1.17
ACTN1-213ENST00000554508 RLIMQ9NVW2 624 aa7.73□□□□□ -1.17
ACTN1-213ENST00000554508 PARPBPQ9NWS1 579 aa7.73□□□□□ -1.17
ACTN1-213ENST00000554508 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.73□□□□□ -1.17
ACTN1-213ENST00000554508 PRSS50Q9UI38 385 aa7.73□□□□□ -1.17
ACTN1-213ENST00000554508 CORO2BQ9UQ03 480 aa7.73□□□□□ -1.17
ACTN1-213ENST00000554508 ZNF443Q9Y2A4 671 aaPredicted RBP7.73□□□□□ -1.17
ACTN1-213ENST00000554508 NOSIPQ9Y314 301 aaKnown RBP7.73□□□□□ -1.17
ACTN1-213ENST00000554508 MTORP42345 2549 aa7.72□□□□□ -1.17
ACTN1-213ENST00000554508 ZNF716A6NP11 495 aa7.72□□□□□ -1.17
ACTN1-213ENST00000554508 BBIP1A8MTZ0 92 aa7.72□□□□□ -1.17
ACTN1-213ENST00000554508 EVPLLA8MZ36 301 aa7.72□□□□□ -1.17
ACTN1-213ENST00000554508 C5orf58C9J3I9 102 aa7.72□□□□□ -1.17
ACTN1-213ENST00000554508 MRASO14807 208 aa7.72□□□□□ -1.17
ACTN1-213ENST00000554508 SMPD2O60906 423 aa7.72□□□□□ -1.17
ACTN1-213ENST00000554508 MRPL33O75394 65 aaKnown RBP7.72□□□□□ -1.17
ACTN1-213ENST00000554508 PGM3O95394 542 aa7.72□□□□□ -1.17
ACTN1-213ENST00000554508 IMPDH2P12268 514 aa7.72□□□□□ -1.17
ACTN1-213ENST00000554508 COX4I1P13073 169 aa7.72□□□□□ -1.17
ACTN1-213ENST00000554508 CCNA2P20248 432 aa7.72□□□□□ -1.17
ACTN1-213ENST00000554508 COX5AP20674 150 aa7.72□□□□□ -1.17
ACTN1-213ENST00000554508 IDUAP35475 653 aa7.72□□□□□ -1.17
ACTN1-213ENST00000554508 NKX6-1P78426 367 aaPredicted RBP7.72□□□□□ -1.17
ACTN1-213ENST00000554508 FOXD4Q12950 439 aaPredicted RBP7.72□□□□□ -1.17
ACTN1-213ENST00000554508 NFYCQ13952 458 aa7.72□□□□□ -1.17
ACTN1-213ENST00000554508 TAB1Q15750 504 aa7.72□□□□□ -1.17
ACTN1-213ENST00000554508 RPS26P11Q5JNZ5 115 aaPredicted RBP7.72□□□□□ -1.17
ACTN1-213ENST00000554508 FBXW9Q5XUX1 488 aa7.72□□□□□ -1.17
ACTN1-213ENST00000554508 REP15Q6BDI9 236 aa7.72□□□□□ -1.17
ACTN1-213ENST00000554508 ADAM5Q6NVV9 412 aa7.72□□□□□ -1.17
ACTN1-213ENST00000554508 PAQR6Q6TCH4 344 aa7.72□□□□□ -1.17
ACTN1-213ENST00000554508 PRSS57Q6UWY2 283 aa7.72□□□□□ -1.17
ACTN1-213ENST00000554508 ZNF704Q6ZNC4 412 aaPredicted RBP7.72□□□□□ -1.17
ACTN1-213ENST00000554508 DHDDSQ86SQ9 333 aa7.72□□□□□ -1.17
ACTN1-213ENST00000554508 RETREG3Q86VR2 466 aa7.72□□□□□ -1.17
ACTN1-213ENST00000554508 P3H2Q8IVL5 708 aa7.72□□□□□ -1.17
ACTN1-213ENST00000554508 CLIP4Q8N3C7 705 aa7.72□□□□□ -1.17
ACTN1-213ENST00000554508 POU5F2Q8N7G0 328 aa7.72□□□□□ -1.17
ACTN1-213ENST00000554508 ZNF611Q8N823 705 aa7.72□□□□□ -1.17
ACTN1-213ENST00000554508 RP9Q8TA86 221 aaKnown RBP7.72□□□□□ -1.17
ACTN1-213ENST00000554508 MUCL1Q96DR8 90 aa7.72□□□□□ -1.17
ACTN1-213ENST00000554508 CCL19Q99731 98 aa7.72□□□□□ -1.17
ACTN1-213ENST00000554508 TMEM204Q9BSN7 226 aa7.72□□□□□ -1.17
ACTN1-213ENST00000554508 PIF1Q9H611 641 aa7.72□□□□□ -1.17
ACTN1-213ENST00000554508 SLAMF8Q9P0V8 285 aa7.72□□□□□ -1.17
ACTN1-213ENST00000554508 USF3Q68DE3 2245 aa7.72□□□□□ -1.17
ACTN1-213ENST00000554508 PLCE1Q9P212 2302 aa7.72□□□□□ -1.17
ACTN1-213ENST00000554508 FLNAP21333 2647 aaKnown RBP7.71□□□□□ -1.17
ACTN1-213ENST00000554508 ZC3H12DA2A288 527 aaKnown RBP7.71□□□□□ -1.18
ACTN1-213ENST00000554508 LIPT2A6NK58 231 aa7.71□□□□□ -1.18
ACTN1-213ENST00000554508 A8MVM7 634 aa7.71□□□□□ -1.18
ACTN1-213ENST00000554508 FBP2O00757 339 aa7.71□□□□□ -1.18
ACTN1-213ENST00000554508 HS3ST1O14792 307 aa7.71□□□□□ -1.18
ACTN1-213ENST00000554508 AIM2O14862 343 aa7.71□□□□□ -1.18
ACTN1-213ENST00000554508 LYZL6O75951 148 aa7.71□□□□□ -1.18
ACTN1-213ENST00000554508 VAMP5O95183 116 aa7.71□□□□□ -1.18
ACTN1-213ENST00000554508 GPIP06744 558 aa7.71□□□□□ -1.18
ACTN1-213ENST00000554508 CD3EP07766 207 aa7.71□□□□□ -1.18
ACTN1-213ENST00000554508 NUDT7P0C024 238 aa7.71□□□□□ -1.18
ACTN1-213ENST00000554508 ARAFP10398 606 aa7.71□□□□□ -1.18
ACTN1-213ENST00000554508 GPX2P18283 190 aa7.71□□□□□ -1.18
ACTN1-213ENST00000554508 GGT1P19440 569 aa7.71□□□□□ -1.18
ACTN1-213ENST00000554508 PRKAR1BP31321 381 aa7.71□□□□□ -1.18
ACTN1-213ENST00000554508 CDK6Q00534 326 aa7.71□□□□□ -1.18
ACTN1-213ENST00000554508 CAPRIN1Q14444 709 aaKnown RBP7.71□□□□□ -1.18
ACTN1-213ENST00000554508 TSC22D1Q15714 1073 aa7.71□□□□□ -1.18
ACTN1-213ENST00000554508 COQ5Q5HYK3 327 aa7.71□□□□□ -1.18
ACTN1-213ENST00000554508 TIMM23BQ5SRD1 257 aa7.71□□□□□ -1.18
ACTN1-213ENST00000554508 NCMAPQ5T1S8 102 aa7.71□□□□□ -1.18
ACTN1-213ENST00000554508 GCNT6Q5T4J0 391 aa7.71□□□□□ -1.18
ACTN1-213ENST00000554508 C1QTNF12Q5T7M4 302 aa7.71□□□□□ -1.18
ACTN1-213ENST00000554508 OR7E24Q6IFN5 339 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms