RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 RASSF6Q6ZTQ3 369 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 ASB18Q6ZVZ8 466 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 DTX2Q86UW9 622 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 THOC6Q86W42 341 aaKnown RBP4.05□□□□□ -1.76
ATXN3-227ENST00000554491 CPNE9Q8IYJ1 553 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 RASGEF1AQ8N9B8 481 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 ZBTB34Q8NCN2 500 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 BPIFB6Q8NFQ5 453 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 STEAP2Q8NFT2 490 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 OR5B17Q8NGF7 314 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 OR5T3Q8NGG3 340 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 OR13D1Q8NGV5 346 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 OR2L2Q8NH16 312 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 OR51A7Q8NH64 312 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 DNAJB14Q8TBM8 379 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 TBCKQ8TEA7 893 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 RLN3Q8WXF3 142 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 ATG4AQ8WYN0 398 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 HSD17B8Q92506 261 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 RAB1CQ92928 201 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 PSMG2Q969U7 264 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 FAM120BQ96EK7 910 aaKnown RBP4.05□□□□□ -1.76
ATXN3-227ENST00000554491 SMIM12Q96EX1 92 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 WBP1Q96G27 269 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 SLC41A2Q96JW4 573 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 MRGPRX1Q96LB2 322 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 SPATA13Q96N96 652 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 GAL3ST4Q96RP7 486 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 ACO2Q99798 780 aaKnown RBP4.05□□□□□ -1.76
ATXN3-227ENST00000554491 ITPAQ9BY32 194 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 ZNF436Q9C0F3 470 aaPredicted RBP4.05□□□□□ -1.76
ATXN3-227ENST00000554491 TMEM117Q9H0C3 514 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 HIPK2Q9H2X6 1198 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 VCX2Q9H322 139 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 NXF3Q9H4D5 531 aaKnown RBP4.05□□□□□ -1.76
ATXN3-227ENST00000554491 FBXO44Q9H4M3 255 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 ACTL8Q9H568 366 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 CACYBPQ9HB71 228 aaKnown RBP4.05□□□□□ -1.76
ATXN3-227ENST00000554491 LPAR2Q9HBW0 351 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 KCNK9Q9NPC2 374 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 NGBQ9NPG2 151 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 SLC22A11Q9NSA0 550 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 FAM118AQ9NWS6 357 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 FBXL12Q9NXK8 326 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 SLCO1C1Q9NYB5 712 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 HEY2Q9UBP5 337 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 DUX4Q9UBX2 424 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 ZNF282Q9UDV7 671 aaPredicted RBP4.05□□□□□ -1.76
ATXN3-227ENST00000554491 LGALS13Q9UHV8 139 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 ANAPC7Q9UJX3 599 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 DNPEPQ9ULA0 475 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 ING4Q9UNL4 249 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 PSG11Q9UQ72 335 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 MAB21L2Q9Y586 359 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 MRPS18BQ9Y676 258 aaKnown RBP4.05□□□□□ -1.76
ATXN3-227ENST00000554491 ACACAQ13085 2346 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 TSC2P49815 1807 aa4.05□□□□□ -1.76
ATXN3-227ENST00000554491 SHROOM3Q8TF72 1996 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 IGKV6D-41A0A0C4DH26 115 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 A0A0U1RQS6 177 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 A0A1B0GV72 72 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 C17orf102A2RUQ5 167 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 TRIM49BA6NDI0 452 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 A8MV72 311 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-227ENST00000554491 HIDE1A8MVS5 230 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 CDRT15L2A8MXV6 281 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 C1orf196B1AJZ1 125 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 PRAMEF26H0Y7S4 382 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 M0QYG6 137 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 M0R3G1 203 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 LGALS8O00214 317 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 WWP2O00308 870 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 SYT5O00445 386 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 PDXKO00764 312 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 TP53I11O14683 189 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 ADAM20O43506 726 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 LCMT2O60294 686 aaKnown RBP4.04□□□□□ -1.76
ATXN3-227ENST00000554491 NME2P1O60361 137 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 HCN1O60741 890 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 TBX19O60806 448 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 PRAMEF11O60813 436 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 KHDRBS3O75525 346 aaKnown RBP4.04□□□□□ -1.76
ATXN3-227ENST00000554491 AKAP3O75969 853 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 CH25HO95992 272 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 CYB5R3P00387 301 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-227ENST00000554491 LALBAP00709 142 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 NR3C1P04150 777 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 ERCC1P07992 297 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-227ENST00000554491 SRPRAP08240 638 aaKnown RBP4.04□□□□□ -1.76
ATXN3-227ENST00000554491 MMP2P08253 660 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 F7P08709 466 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-227ENST00000554491 SPP1P10451 314 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 CTSAP10619 480 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 NELFEP18615 380 aaKnown RBP4.04□□□□□ -1.76
ATXN3-227ENST00000554491 NPR2P20594 1047 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 EEF1B2P24534 225 aaKnown RBP4.04□□□□□ -1.76
ATXN3-227ENST00000554491 SSTR2P30874 369 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 CALCRP30988 508 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 MAP2K4P45985 399 aa4.04□□□□□ -1.76
ATXN3-227ENST00000554491 GABRA4P48169 554 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms