RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 GLRX2Q9NS18 164 aa12.4□□□□□ -0.42
TUBB3-202ENST00000553656 RIMS3Q9UJD0 308 aa12.4□□□□□ -0.42
TUBB3-202ENST00000553656 TRAPPC4Q9Y296 219 aa12.4□□□□□ -0.42
TUBB3-202ENST00000553656 PHF3Q92576 2039 aaKnown RBP12.4□□□□□ -0.42
TUBB3-202ENST00000553656 MYO7BQ6PIF6 2116 aa12.4□□□□□ -0.43
TUBB3-202ENST00000553656 UBR5O95071 2799 aaPredicted RBP12.39□□□□□ -0.43
TUBB3-202ENST00000553656 TRAV36DV7A0A075B6V5 113 aa12.39□□□□□ -0.43
TUBB3-202ENST00000553656 OR2T1O43869 369 aa12.39□□□□□ -0.43
TUBB3-202ENST00000553656 AQP8O94778 261 aa12.39□□□□□ -0.43
TUBB3-202ENST00000553656 TOXO94900 526 aa12.39□□□□□ -0.43
TUBB3-202ENST00000553656 CRHP06850 196 aa12.39□□□□□ -0.43
TUBB3-202ENST00000553656 THRBP10828 461 aa12.39□□□□□ -0.43
TUBB3-202ENST00000553656 ITGA2P17301 1181 aa12.39□□□□□ -0.43
TUBB3-202ENST00000553656 FPR1P21462 350 aa12.39□□□□□ -0.43
TUBB3-202ENST00000553656 OPRM1P35372 400 aa12.39□□□□□ -0.43
TUBB3-202ENST00000553656 CTBP2P56545 445 aa12.39□□□□□ -0.43
TUBB3-202ENST00000553656 ST3GAL3Q11203 375 aa12.39□□□□□ -0.43
TUBB3-202ENST00000553656 PIN1Q13526 163 aaPredicted RBP12.39□□□□□ -0.43
TUBB3-202ENST00000553656 OR7A5Q15622 319 aa12.39□□□□□ -0.43
TUBB3-202ENST00000553656 LCN8Q6JVE9 175 aa12.39□□□□□ -0.43
TUBB3-202ENST00000553656 GDF7Q7Z4P5 450 aa12.39□□□□□ -0.43
TUBB3-202ENST00000553656 C10orf53Q8N6V4 93 aa12.39□□□□□ -0.43
TUBB3-202ENST00000553656 CNEP1R1Q8N9A8 125 aa12.39□□□□□ -0.43
TUBB3-202ENST00000553656 RNF128Q8TEB7 428 aa12.39□□□□□ -0.43
TUBB3-202ENST00000553656 TMEM43Q9BTV4 400 aa12.39□□□□□ -0.43
TUBB3-202ENST00000553656 FNDC11Q9BVV2 318 aa12.39□□□□□ -0.43
TUBB3-202ENST00000553656 SFXN3Q9BWM7 321 aa12.39□□□□□ -0.43
TUBB3-202ENST00000553656 AMBRA1Q9C0C7 1298 aa12.39□□□□□ -0.43
TUBB3-202ENST00000553656 C6orf203Q9P0P8 240 aaPredicted RBP12.39□□□□□ -0.43
TUBB3-202ENST00000553656 KLHL9Q9P2J3 617 aa12.39□□□□□ -0.43
TUBB3-202ENST00000553656 ZNF629Q9UEG4 869 aaPredicted RBP12.39□□□□□ -0.43
TUBB3-202ENST00000553656 EMC9Q9Y3B6 208 aa12.39□□□□□ -0.43
TUBB3-202ENST00000553656 ARHGAP21Q5T5U3 1957 aa12.39□□□□□ -0.43
TUBB3-202ENST00000553656 IGHV3-15A0A0B4J1V0 119 aa12.38□□□□□ -0.43
TUBB3-202ENST00000553656 WIPF3A6NGB9 483 aa12.38□□□□□ -0.43
TUBB3-202ENST00000553656 LIPT2A6NK58 231 aa12.38□□□□□ -0.43
TUBB3-202ENST00000553656 FAM90A27PA6NNH2 459 aa12.38□□□□□ -0.43
TUBB3-202ENST00000553656 GSC2O15499 205 aa12.38□□□□□ -0.43
TUBB3-202ENST00000553656 CLDN14O95500 239 aa12.38□□□□□ -0.43
TUBB3-202ENST00000553656 IL18BPO95998 194 aa12.38□□□□□ -0.43
TUBB3-202ENST00000553656 IMPDH2P12268 514 aa12.38□□□□□ -0.43
TUBB3-202ENST00000553656 ATP6V1B2P21281 511 aa12.38□□□□□ -0.43
TUBB3-202ENST00000553656 BMP5P22003 454 aa12.38□□□□□ -0.43
TUBB3-202ENST00000553656 RPS5P46782 204 aaKnown RBP12.38□□□□□ -0.43
TUBB3-202ENST00000553656 YAP1P46937 504 aaKnown RBP12.38□□□□□ -0.43
TUBB3-202ENST00000553656 TRAP1Q12931 704 aaKnown RBP12.38□□□□□ -0.43
TUBB3-202ENST00000553656 FOXD4Q12950 439 aaPredicted RBP12.38□□□□□ -0.43
TUBB3-202ENST00000553656 OFCC1Q8IZS5 231 aa12.38□□□□□ -0.43
TUBB3-202ENST00000553656 FAM86B1Q8N7N1 296 aa12.38□□□□□ -0.43
TUBB3-202ENST00000553656 NAXEQ8NCW5 288 aa12.38□□□□□ -0.43
TUBB3-202ENST00000553656 MFSD8Q8NHS3 518 aa12.38□□□□□ -0.43
TUBB3-202ENST00000553656 PIGXQ8TBF5 258 aa12.38□□□□□ -0.43
TUBB3-202ENST00000553656 ABHD3Q8WU67 409 aa12.38□□□□□ -0.43
TUBB3-202ENST00000553656 SLC25A36Q96CQ1 311 aa12.38□□□□□ -0.43
TUBB3-202ENST00000553656 KTI12Q96EK9 354 aaPredicted RBP12.38□□□□□ -0.43
TUBB3-202ENST00000553656 LRRC46Q96FV0 321 aa12.38□□□□□ -0.43
TUBB3-202ENST00000553656 GMPPAQ96IJ6 420 aaPredicted RBP12.38□□□□□ -0.43
TUBB3-202ENST00000553656 TACO1Q9BSH4 297 aaKnown RBP12.38□□□□□ -0.43
TUBB3-202ENST00000553656 CADM1Q9BY67 442 aaKnown RBP12.38□□□□□ -0.43
TUBB3-202ENST00000553656 LRMDAQ9H2I8 198 aa12.38□□□□□ -0.43
TUBB3-202ENST00000553656 MMADHCQ9H3L0 296 aaPredicted RBP12.38□□□□□ -0.43
TUBB3-202ENST00000553656 ENPP4Q9Y6X5 453 aa12.38□□□□□ -0.43
TUBB3-202ENST00000553656 DIDO1Q9BTC0 2240 aaKnown RBP12.37□□□□□ -0.43
TUBB3-202ENST00000553656 IGKV1D-42A0A075B6H8 117 aa12.37□□□□□ -0.43
TUBB3-202ENST00000553656 A0A1W2PNV4 684 aa12.37□□□□□ -0.43
TUBB3-202ENST00000553656 EEF1E1-BLOC1S5C9J1V9 151 aa12.37□□□□□ -0.43
TUBB3-202ENST00000553656 hCG_2039718K7EN88 272 aa12.37□□□□□ -0.43
TUBB3-202ENST00000553656 SMAD9O15198 467 aaKnown RBP12.37□□□□□ -0.43
TUBB3-202ENST00000553656 EEF1E1O43324 174 aaKnown RBP12.37□□□□□ -0.43
TUBB3-202ENST00000553656 CYTIPO60759 359 aa12.37□□□□□ -0.43
TUBB3-202ENST00000553656 NPIPB7O75200 414 aa12.37□□□□□ -0.43
TUBB3-202ENST00000553656 FABP3P05413 133 aa12.37□□□□□ -0.43
TUBB3-202ENST00000553656 RNF224P0DH78 156 aa12.37□□□□□ -0.43
TUBB3-202ENST00000553656 PTNP21246 168 aa12.37□□□□□ -0.43
TUBB3-202ENST00000553656 RBM34P42696 430 aaKnown RBP12.37□□□□□ -0.43
TUBB3-202ENST00000553656 AGFG1P52594 562 aaKnown RBP12.37□□□□□ -0.43
TUBB3-202ENST00000553656 SIRPAP78324 504 aa12.37□□□□□ -0.43
TUBB3-202ENST00000553656 MS4A2Q01362 244 aa12.37□□□□□ -0.43
TUBB3-202ENST00000553656 RASGEF1BQ0VAM2 473 aa12.37□□□□□ -0.43
TUBB3-202ENST00000553656 FLOT2Q14254 428 aa12.37□□□□□ -0.43
TUBB3-202ENST00000553656 MFSD13AQ14CX5 517 aa12.37□□□□□ -0.43
TUBB3-202ENST00000553656 TRAM2Q15035 370 aa12.37□□□□□ -0.43
TUBB3-202ENST00000553656 SLC25A35Q3KQZ1 300 aa12.37□□□□□ -0.43
TUBB3-202ENST00000553656 TMEM201Q5SNT2 666 aa12.37□□□□□ -0.43
TUBB3-202ENST00000553656 OTUD3Q5T2D3 398 aaPredicted RBP12.37□□□□□ -0.43
TUBB3-202ENST00000553656 FAM69AQ5T7M9 428 aa12.37□□□□□ -0.43
TUBB3-202ENST00000553656 PAQR6Q6TCH4 344 aa12.37□□□□□ -0.43
TUBB3-202ENST00000553656 TSPYL5Q86VY4 417 aaPredicted RBP12.37□□□□□ -0.43
TUBB3-202ENST00000553656 P3H2Q8IVL5 708 aa12.37□□□□□ -0.43
TUBB3-202ENST00000553656 LILRB4Q8NHJ6 448 aa12.37□□□□□ -0.43
TUBB3-202ENST00000553656 HS6ST2Q96MM7 605 aa12.37□□□□□ -0.43
TUBB3-202ENST00000553656 ASPNQ9BXN1 380 aa12.37□□□□□ -0.43
TUBB3-202ENST00000553656 SLC19A3Q9BZV2 496 aa12.37□□□□□ -0.43
TUBB3-202ENST00000553656 KLHL4Q9C0H6 718 aa12.37□□□□□ -0.43
TUBB3-202ENST00000553656 GP6Q9HCN6 339 aa12.37□□□□□ -0.43
TUBB3-202ENST00000553656 KCNJ16Q9NPI9 418 aa12.37□□□□□ -0.43
TUBB3-202ENST00000553656 EMC3Q9P0I2 261 aa12.37□□□□□ -0.43
TUBB3-202ENST00000553656 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.37□□□□□ -0.43
TUBB3-202ENST00000553656 CLEC4AQ9UMR7 237 aa12.37□□□□□ -0.43
TUBB3-202ENST00000553656 A4GNTQ9UNA3 340 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms