RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 A0A1B0GTQ1 180 aa16.15■□□□□ 0.18
SYNE3-202ENST00000553340 A0A1B0GX12 115 aa16.15■□□□□ 0.18
SYNE3-202ENST00000553340 SULT1B1O43704 296 aa16.15■□□□□ 0.18
SYNE3-202ENST00000553340 EPCAMP16422 314 aa16.15■□□□□ 0.18
SYNE3-202ENST00000553340 CXCL2P19875 107 aa16.15■□□□□ 0.18
SYNE3-202ENST00000553340 NFYAP23511 347 aaPredicted RBP16.15■□□□□ 0.18
SYNE3-202ENST00000553340 PSMA6P60900 246 aaKnown RBP16.15■□□□□ 0.18
SYNE3-202ENST00000553340 SNRPNP63162 240 aaKnown RBP16.15■□□□□ 0.18
SYNE3-202ENST00000553340 ID2Q02363 134 aa16.15■□□□□ 0.18
SYNE3-202ENST00000553340 GGTLC2Q14390 218 aa16.15■□□□□ 0.18
SYNE3-202ENST00000553340 FHL5Q5TD97 284 aa16.15■□□□□ 0.18
SYNE3-202ENST00000553340 AGBL4Q5VU57 503 aa16.15■□□□□ 0.18
SYNE3-202ENST00000553340 ZNF433Q8N7K0 673 aaPredicted RBP16.15■□□□□ 0.18
SYNE3-202ENST00000553340 ZCCHC10Q8TBK6 192 aa16.15■□□□□ 0.18
SYNE3-202ENST00000553340 NT5CQ8TCD5 201 aa16.15■□□□□ 0.18
SYNE3-202ENST00000553340 S100A16Q96FQ6 103 aaKnown RBP16.15■□□□□ 0.18
SYNE3-202ENST00000553340 WBP1Q96G27 269 aa16.15■□□□□ 0.18
SYNE3-202ENST00000553340 LRFN5Q96NI6 719 aa16.15■□□□□ 0.18
SYNE3-202ENST00000553340 GPN1Q9HCN4 374 aaPredicted RBP16.15■□□□□ 0.18
SYNE3-202ENST00000553340 SDHAF2Q9NX18 166 aa16.15■□□□□ 0.18
SYNE3-202ENST00000553340 FBXL3Q9UKT7 428 aa16.15■□□□□ 0.18
SYNE3-202ENST00000553340 ICAM5Q9UMF0 924 aa16.15■□□□□ 0.18
SYNE3-202ENST00000553340 SESN1Q9Y6P5 492 aa16.15■□□□□ 0.18
SYNE3-202ENST00000553340 DOCK9Q9BZ29 2069 aa16.14■□□□□ 0.17
SYNE3-202ENST00000553340 TSPAN4O14817 238 aa16.14■□□□□ 0.17
SYNE3-202ENST00000553340 CREBL2O60519 120 aaPredicted RBP16.14■□□□□ 0.17
SYNE3-202ENST00000553340 SERPINI2O75830 405 aa16.14■□□□□ 0.17
SYNE3-202ENST00000553340 CEACAM5P06731 702 aa16.14■□□□□ 0.17
SYNE3-202ENST00000553340 HNRNPA1P09651 372 aaKnown RBP eCLIP16.14■□□□□ 0.17
SYNE3-202ENST00000553340 HIST1H1CP16403 213 aaKnown RBP16.14■□□□□ 0.17
SYNE3-202ENST00000553340 DPP4P27487 766 aa16.14■□□□□ 0.17
SYNE3-202ENST00000553340 MAP2K6P52564 334 aa16.14■□□□□ 0.17
SYNE3-202ENST00000553340 ILF3Q12906 894 aaKnown RBP eCLIP16.14■□□□□ 0.17
SYNE3-202ENST00000553340 HTR4Q13639 388 aa16.14■□□□□ 0.17
SYNE3-202ENST00000553340 RUNX2Q13950 521 aa16.14■□□□□ 0.17
SYNE3-202ENST00000553340 SERPINA12Q8IW75 414 aa16.14■□□□□ 0.17
SYNE3-202ENST00000553340 OR4E2Q8NGC2 313 aa16.14■□□□□ 0.17
SYNE3-202ENST00000553340 MRPL48Q96GC5 212 aaKnown RBP16.14■□□□□ 0.17
SYNE3-202ENST00000553340 STACQ99469 402 aa16.14■□□□□ 0.17
SYNE3-202ENST00000553340 CCDC86Q9H6F5 360 aaKnown RBP16.14■□□□□ 0.17
SYNE3-202ENST00000553340 CA10Q9NS85 328 aa16.14■□□□□ 0.17
SYNE3-202ENST00000553340 TAS2R10Q9NYW0 307 aa16.14■□□□□ 0.17
SYNE3-202ENST00000553340 TAS2R5Q9NYW4 299 aa16.14■□□□□ 0.17
SYNE3-202ENST00000553340 SCML1Q9UN30 329 aa16.14■□□□□ 0.17
SYNE3-202ENST00000553340 GXYLT2A0PJZ3 443 aa16.14■□□□□ 0.17
SYNE3-202ENST00000553340 NARSO43776 548 aaKnown RBP16.14■□□□□ 0.17
SYNE3-202ENST00000553340 B3GALT2O43825 422 aa16.14■□□□□ 0.17
SYNE3-202ENST00000553340 CTRB1P17538 263 aa16.14■□□□□ 0.17
SYNE3-202ENST00000553340 PSMB10P40306 273 aa16.14■□□□□ 0.17
SYNE3-202ENST00000553340 MRPS10P82664 201 aaKnown RBP16.14■□□□□ 0.17
SYNE3-202ENST00000553340 LGALS3BPQ08380 585 aa16.14■□□□□ 0.17
SYNE3-202ENST00000553340 STX4Q12846 297 aa16.14■□□□□ 0.17
SYNE3-202ENST00000553340 PON3Q15166 354 aa16.14■□□□□ 0.17
SYNE3-202ENST00000553340 OLFML2AQ68BL7 652 aa16.14■□□□□ 0.17
SYNE3-202ENST00000553340 CTRB2Q6GPI1 263 aa16.14■□□□□ 0.17
SYNE3-202ENST00000553340 ORAI1Q96D31 301 aa16.14■□□□□ 0.17
SYNE3-202ENST00000553340 GFI1Q99684 422 aa16.14■□□□□ 0.17
SYNE3-202ENST00000553340 ARPC5LQ9BPX5 153 aa16.14■□□□□ 0.17
SYNE3-202ENST00000553340 SLC25A18Q9H1K4 315 aa16.14■□□□□ 0.17
SYNE3-202ENST00000553340 CD93Q9NPY3 652 aa16.14■□□□□ 0.17
SYNE3-202ENST00000553340 POT1Q9NUX5 634 aa16.14■□□□□ 0.17
SYNE3-202ENST00000553340 NCDNQ9UBB6 729 aa16.14■□□□□ 0.17
SYNE3-202ENST00000553340 CHRNA9Q9UGM1 479 aa16.14■□□□□ 0.17
SYNE3-202ENST00000553340 DAPP1Q9UN19 280 aa16.14■□□□□ 0.17
SYNE3-202ENST00000553340 LAMA3Q16787 3333 aa16.14■□□□□ 0.17
SYNE3-202ENST00000553340 A0A1B0GWA3 101 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 ANKRD20A5PA0PJZ0 165 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 LRRC72A6NJI9 287 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 TRIM77I1YAP6 450 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 PIN1P1O15428 100 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 KCNJ13O60928 360 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 TMEM127O75204 238 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 AK1P00568 194 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 IFNA16P05015 189 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 ACRP10323 421 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 FHL1Q13642 323 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 EXOSC6Q5RKV6 272 aaKnown RBP16.13■□□□□ 0.17
SYNE3-202ENST00000553340 TMEM69Q5SWH9 247 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 OR14A16Q8NHC5 309 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 C1orf216Q8TAB5 229 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 LCN9Q8WX39 176 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 PMM1Q92871 262 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 TMPRSS13Q9BYE2 586 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 REG4Q9BYZ8 158 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 LIN7BQ9HAP6 207 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 C12orf4Q9NQ89 552 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 ANKRD10Q9NXR5 420 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 FLRT3Q9NZU0 649 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 CA5BQ9Y2D0 317 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 KCNMB2Q9Y691 235 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 COLEC10Q9Y6Z7 277 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 MFSD2BA6NFX1 497 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 PRR19A6NJB7 356 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 ACOD1A6NK06 481 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 BRINP1O60477 761 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 RGS11O94810 467 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 RBM34P42696 430 aaKnown RBP16.13■□□□□ 0.17
SYNE3-202ENST00000553340 PTH2RP49190 550 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 PLAURQ03405 335 aa16.13■□□□□ 0.17
SYNE3-202ENST00000553340 CNOT9Q92600 299 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms