RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 C16orf89Q6UX73 402 aa12.59□□□□□ -0.39
PTCH1-226ENST00000553011 FAM214BQ7L5A3 538 aa12.59□□□□□ -0.39
PTCH1-226ENST00000553011 LUZP2Q86TE4 346 aa12.59□□□□□ -0.39
PTCH1-226ENST00000553011 P3H2Q8IVL5 708 aa12.59□□□□□ -0.39
PTCH1-226ENST00000553011 DNAJA4Q8WW22 397 aaPredicted RBP12.59□□□□□ -0.39
PTCH1-226ENST00000553011 SLC47A1Q96FL8 570 aa12.59□□□□□ -0.39
PTCH1-226ENST00000553011 TPD52L3Q96J77 140 aa12.59□□□□□ -0.39
PTCH1-226ENST00000553011 CDRT15Q96T59 188 aa12.59□□□□□ -0.39
PTCH1-226ENST00000553011 OPN3Q9H1Y3 402 aaPredicted RBP12.59□□□□□ -0.39
PTCH1-226ENST00000553011 PIGMQ9H3S5 423 aa12.59□□□□□ -0.39
PTCH1-226ENST00000553011 C12orf10Q9HB07 376 aa12.59□□□□□ -0.39
PTCH1-226ENST00000553011 ING1Q9UK53 422 aaPredicted RBP12.59□□□□□ -0.39
PTCH1-226ENST00000553011 TRAPPC4Q9Y296 219 aa12.59□□□□□ -0.39
PTCH1-226ENST00000553011 SLC9A8Q9Y2E8 581 aa12.59□□□□□ -0.39
PTCH1-226ENST00000553011 NAV2Q8IVL1 2488 aa12.59□□□□□ -0.39
PTCH1-226ENST00000553011 IGKV1D-42A0A075B6H8 117 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 LIPT2A6NK58 231 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 CYTIPO60759 359 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 RAMP1O60894 148 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 PRKD3O94806 890 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 ZNF682O95780 498 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 CGAP01215 116 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 THY1P04216 161 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 TCN1P20061 433 aaPredicted RBP12.58□□□□□ -0.4
PTCH1-226ENST00000553011 FPR1P21462 350 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 CALB2P22676 271 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 AGTR1P30556 359 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 MSX2P35548 267 aaPredicted RBP12.58□□□□□ -0.4
PTCH1-226ENST00000553011 OR1E2P47887 323 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 MNAT1P51948 309 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 CDH12P55289 794 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 SLC35A1P78382 337 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 RASGEF1BQ0VAM2 473 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 SNTB1Q13884 538 aaKnown RBP12.58□□□□□ -0.4
PTCH1-226ENST00000553011 CEACAM7Q14002 265 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 RNPS1Q15287 305 aaKnown RBP12.58□□□□□ -0.4
PTCH1-226ENST00000553011 OR7A5Q15622 319 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 FBXL19-AS1Q494R0 122 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 SAMD4BQ5PRF9 694 aaKnown RBP12.58□□□□□ -0.4
PTCH1-226ENST00000553011 EEF1A1P5Q5VTE0 462 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 GTF2IRD2BQ6EKJ0 949 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 DEF8Q6ZN54 512 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 RINLQ6ZS11 566 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 TRPM8Q7Z2W7 1104 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 VTCN1Q7Z7D3 282 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 GTF2IRD2Q86UP8 949 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 CCDC103Q8IW40 242 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 TUSC5Q8IXB3 177 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 SLC43A2Q8N370 569 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 ACBD4Q8NC06 268 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 RBM15BQ8NDT2 890 aaKnown RBP12.58□□□□□ -0.4
PTCH1-226ENST00000553011 STK35Q8TDR2 534 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 SLC38A4Q969I6 547 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 ZHX1-C8orf76Q96EF9 292 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 KTI12Q96EK9 354 aaPredicted RBP12.58□□□□□ -0.4
PTCH1-226ENST00000553011 PSD2Q9BQI7 771 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 GLRX2Q9NS18 164 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 NDE1Q9NXR1 346 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 SELENONQ9NZV5 590 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 CD300AQ9UGN4 299 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 EMC9Q9Y3B6 208 aa12.58□□□□□ -0.4
PTCH1-226ENST00000553011 AKAP6Q13023 2319 aa12.57□□□□□ -0.4
PTCH1-226ENST00000553011 NBPF19A0A087WUL8 3843 aa12.57□□□□□ -0.4
PTCH1-226ENST00000553011 A0A087WUJ7 227 aa12.57□□□□□ -0.4
PTCH1-226ENST00000553011 A8MXE2 369 aa12.57□□□□□ -0.4
PTCH1-226ENST00000553011 MSTNO14793 375 aa12.57□□□□□ -0.4
PTCH1-226ENST00000553011 DNPH1O43598 174 aa12.57□□□□□ -0.4
PTCH1-226ENST00000553011 LYPD3O95274 346 aa12.57□□□□□ -0.4
PTCH1-226ENST00000553011 AHSA1O95433 338 aa12.57□□□□□ -0.4
PTCH1-226ENST00000553011 SERPINA1P01009 418 aa12.57□□□□□ -0.4
PTCH1-226ENST00000553011 PNMTP11086 282 aa12.57□□□□□ -0.4
PTCH1-226ENST00000553011 HSD17B1P14061 328 aa12.57□□□□□ -0.4
PTCH1-226ENST00000553011 IGFBP2P18065 325 aa12.57□□□□□ -0.4
PTCH1-226ENST00000553011 UQCRC1P31930 480 aa12.57□□□□□ -0.4
PTCH1-226ENST00000553011 RPS5P46782 204 aaKnown RBP12.57□□□□□ -0.4
PTCH1-226ENST00000553011 SELENOWP63302 87 aa12.57□□□□□ -0.4
PTCH1-226ENST00000553011 ABLIM2Q6H8Q1 611 aa12.57□□□□□ -0.4
PTCH1-226ENST00000553011 GLYATQ6IB77 296 aa12.57□□□□□ -0.4
PTCH1-226ENST00000553011 ZNF613Q6PF04 617 aa12.57□□□□□ -0.4
PTCH1-226ENST00000553011 ZNF474Q6S9Z5 364 aaPredicted RBP12.57□□□□□ -0.4
PTCH1-226ENST00000553011 WDR88Q6ZMY6 472 aa12.57□□□□□ -0.4
PTCH1-226ENST00000553011 MEX3BQ6ZN04 569 aaKnown RBP12.57□□□□□ -0.4
PTCH1-226ENST00000553011 CBLL1Q75N03 491 aa12.57□□□□□ -0.4
PTCH1-226ENST00000553011 NUFIP2Q7Z417 695 aaKnown RBP12.57□□□□□ -0.4
PTCH1-226ENST00000553011 TMEM99Q8N816 258 aa12.57□□□□□ -0.4
PTCH1-226ENST00000553011 OR6K3Q8NGY3 331 aa12.57□□□□□ -0.4
PTCH1-226ENST00000553011 ADAMTS16Q8TE57 1224 aa12.57□□□□□ -0.4
PTCH1-226ENST00000553011 RNASE6Q93091 150 aaKnown RBP12.57□□□□□ -0.4
PTCH1-226ENST00000553011 FAM162AQ96A26 154 aa12.57□□□□□ -0.4
PTCH1-226ENST00000553011 ZNF775Q96BV0 537 aaPredicted RBP12.57□□□□□ -0.4
PTCH1-226ENST00000553011 ZNF300Q96RE9 604 aaPredicted RBP12.57□□□□□ -0.4
PTCH1-226ENST00000553011 PTDSS2Q9BVG9 487 aa12.57□□□□□ -0.4
PTCH1-226ENST00000553011 RBM24Q9BX46 236 aaKnown RBP12.57□□□□□ -0.4
PTCH1-226ENST00000553011 ENKD1Q9H0I2 346 aa12.57□□□□□ -0.4
PTCH1-226ENST00000553011 PCDHAC1Q9H158 963 aa12.57□□□□□ -0.4
PTCH1-226ENST00000553011 C12orf49Q9H741 205 aa12.57□□□□□ -0.4
PTCH1-226ENST00000553011 ADPRHL2Q9NX46 363 aa12.57□□□□□ -0.4
PTCH1-226ENST00000553011 KLHL9Q9P2J3 617 aa12.57□□□□□ -0.4
PTCH1-226ENST00000553011 KLHL13Q9P2N7 655 aa12.57□□□□□ -0.4
PTCH1-226ENST00000553011 PROCRQ9UNN8 238 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms