RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 PPP4R4Q6NUP7 873 aa19■□□□□ 0.63
VPS29-206ENST00000549578 RPRMLQ8N4K4 120 aa19■□□□□ 0.63
VPS29-206ENST00000549578 OR2T29Q8NH02 315 aa19■□□□□ 0.63
VPS29-206ENST00000549578 SLC7A13Q8TCU3 470 aa19■□□□□ 0.63
VPS29-206ENST00000549578 ZPLD1Q8TCW7 415 aa19■□□□□ 0.63
VPS29-206ENST00000549578 TAAR8Q969N4 342 aa19■□□□□ 0.63
VPS29-206ENST00000549578 DUS3LQ96G46 650 aaKnown RBP19■□□□□ 0.63
VPS29-206ENST00000549578 TRIB1Q96RU8 372 aa19■□□□□ 0.63
VPS29-206ENST00000549578 TP63Q9H3D4 680 aaPredicted RBP19■□□□□ 0.63
VPS29-206ENST00000549578 ANKRD19PQ9H560 264 aa19■□□□□ 0.63
VPS29-206ENST00000549578 MEPEQ9NQ76 525 aaPredicted RBP19■□□□□ 0.63
VPS29-206ENST00000549578 VNN3Q9NY84 501 aa19■□□□□ 0.63
VPS29-206ENST00000549578 AP4S1Q9Y587 144 aa19■□□□□ 0.63
VPS29-206ENST00000549578 KIAA1549Q9HCM3 1950 aa19■□□□□ 0.63
VPS29-206ENST00000549578 TRAV36DV7A0A075B6V5 113 aa19■□□□□ 0.63
VPS29-206ENST00000549578 A0A087WUU8 490 aa19■□□□□ 0.63
VPS29-206ENST00000549578 PYCARD-AS1I3L0S3 204 aa19■□□□□ 0.63
VPS29-206ENST00000549578 PIP5K1CO60331 668 aa19■□□□□ 0.63
VPS29-206ENST00000549578 GABRA1P14867 456 aa19■□□□□ 0.63
VPS29-206ENST00000549578 ACVR2AP27037 513 aa19■□□□□ 0.63
VPS29-206ENST00000549578 OR2B6P58173 313 aa19■□□□□ 0.63
VPS29-206ENST00000549578 PPP1R8Q12972 351 aaKnown RBP19■□□□□ 0.63
VPS29-206ENST00000549578 OR7A5Q15622 319 aa19■□□□□ 0.63
VPS29-206ENST00000549578 RTL6Q6ICC9 239 aa19■□□□□ 0.63
VPS29-206ENST00000549578 PODNL1Q6PEZ8 512 aa19■□□□□ 0.63
VPS29-206ENST00000549578 TBPL2Q6SJ96 375 aa19■□□□□ 0.63
VPS29-206ENST00000549578 C5orf46Q6UWT4 87 aa19■□□□□ 0.63
VPS29-206ENST00000549578 RPTNQ6XPR3 784 aa19■□□□□ 0.63
VPS29-206ENST00000549578 ACOT11Q8WXI4 607 aaPredicted RBP19■□□□□ 0.63
VPS29-206ENST00000549578 HS6ST2Q96MM7 605 aa19■□□□□ 0.63
VPS29-206ENST00000549578 EPYCQ99645 322 aa19■□□□□ 0.63
VPS29-206ENST00000549578 YY1AP1Q9H869 796 aa19■□□□□ 0.63
VPS29-206ENST00000549578 FAM215AQ9Y5M1 114 aa19■□□□□ 0.63
VPS29-206ENST00000549578 RELNP78509 3460 aa18.99■□□□□ 0.63
VPS29-206ENST00000549578 ESPL1Q14674 2120 aa18.99■□□□□ 0.63
VPS29-206ENST00000549578 LIPT2A6NK58 231 aa18.99■□□□□ 0.63
VPS29-206ENST00000549578 LRRN3E7EW58 273 aa18.99■□□□□ 0.63
VPS29-206ENST00000549578 PMS2P2O95744 297 aa18.99■□□□□ 0.63
VPS29-206ENST00000549578 KLK2P20151 261 aa18.99■□□□□ 0.63
VPS29-206ENST00000549578 FPR1P21462 350 aa18.99■□□□□ 0.63
VPS29-206ENST00000549578 CA7P43166 264 aa18.99■□□□□ 0.63
VPS29-206ENST00000549578 CASP6P55212 293 aa18.99■□□□□ 0.63
VPS29-206ENST00000549578 SMIM11AP58511 58 aa18.99■□□□□ 0.63
VPS29-206ENST00000549578 RAC3P60763 192 aa18.99■□□□□ 0.63
VPS29-206ENST00000549578 PON3Q15166 354 aa18.99■□□□□ 0.63
VPS29-206ENST00000549578 SEC23BQ15437 767 aa18.99■□□□□ 0.63
VPS29-206ENST00000549578 C1orf185Q5T7R7 199 aa18.99■□□□□ 0.63
VPS29-206ENST00000549578 ZNF730Q6ZMV8 503 aa18.99■□□□□ 0.63
VPS29-206ENST00000549578 ADGRE4PQ86SQ3 457 aa18.99■□□□□ 0.63
VPS29-206ENST00000549578 PRR7Q8TB68 274 aa18.99■□□□□ 0.63
VPS29-206ENST00000549578 FNDC9Q8TBE3 224 aa18.99■□□□□ 0.63
VPS29-206ENST00000549578 SLC25A36Q96CQ1 311 aa18.99■□□□□ 0.63
VPS29-206ENST00000549578 FUZQ9BT04 418 aa18.99■□□□□ 0.63
VPS29-206ENST00000549578 SLC19A3Q9BZV2 496 aa18.99■□□□□ 0.63
VPS29-206ENST00000549578 TIGARQ9NQ88 270 aa18.99■□□□□ 0.63
VPS29-206ENST00000549578 C20orf141Q9NUB4 165 aa18.99■□□□□ 0.63
VPS29-206ENST00000549578 ARMC1Q9NVT9 282 aa18.99■□□□□ 0.63
VPS29-206ENST00000549578 TRAPPC4Q9Y296 219 aa18.99■□□□□ 0.63
VPS29-206ENST00000549578 MED31Q9Y3C7 131 aa18.99■□□□□ 0.63
VPS29-206ENST00000549578 LYVE1Q9Y5Y7 322 aa18.99■□□□□ 0.63
VPS29-206ENST00000549578 U3KQV3 271 aa18.99■□□□□ 0.63
VPS29-206ENST00000549578 IGHV3-15A0A0B4J1V0 119 aa18.98■□□□□ 0.63
VPS29-206ENST00000549578 ENO4A6NNW6 628 aa18.98■□□□□ 0.63
VPS29-206ENST00000549578 STSP08842 583 aa18.98■□□□□ 0.63
VPS29-206ENST00000549578 CBLP22681 906 aa18.98■□□□□ 0.63
VPS29-206ENST00000549578 CSNK2A1P68400 391 aaPredicted RBP18.98■□□□□ 0.63
VPS29-206ENST00000549578 LTBQ06643 244 aa18.98■□□□□ 0.63
VPS29-206ENST00000549578 ZNF239Q16600 458 aaKnown RBP18.98■□□□□ 0.63
VPS29-206ENST00000549578 EXOC3L2Q2M3D2 409 aa18.98■□□□□ 0.63
VPS29-206ENST00000549578 FAM69AQ5T7M9 428 aa18.98■□□□□ 0.63
VPS29-206ENST00000549578 NRMQ8IXM6 262 aa18.98■□□□□ 0.63
VPS29-206ENST00000549578 C10orf53Q8N6V4 93 aa18.98■□□□□ 0.63
VPS29-206ENST00000549578 CPNE4Q96A23 557 aaPredicted RBP18.98■□□□□ 0.63
VPS29-206ENST00000549578 MOGAT1Q96PD6 335 aa18.98■□□□□ 0.63
VPS29-206ENST00000549578 ALPK1Q96QP1 1244 aa18.98■□□□□ 0.63
VPS29-206ENST00000549578 TAPBPLQ9BX59 468 aa18.98■□□□□ 0.63
VPS29-206ENST00000549578 REEP1Q9H902 201 aa18.98■□□□□ 0.63
VPS29-206ENST00000549578 PAQR5Q9NXK6 330 aaPredicted RBP18.98■□□□□ 0.63
VPS29-206ENST00000549578 CLCF1Q9UBD9 225 aa18.98■□□□□ 0.63
VPS29-206ENST00000549578 SAMHD1Q9Y3Z3 626 aaKnown RBP18.98■□□□□ 0.63
VPS29-206ENST00000549578 FTCDNL1E5RQL4 147 aa18.97■□□□□ 0.63
VPS29-206ENST00000549578 TNFRSF11BO00300 401 aa18.97■□□□□ 0.63
VPS29-206ENST00000549578 KRT36O76013 467 aa18.97■□□□□ 0.63
VPS29-206ENST00000549578 SYNGR4O95473 234 aa18.97■□□□□ 0.63
VPS29-206ENST00000549578 TGM6O95932 706 aa18.97■□□□□ 0.63
VPS29-206ENST00000549578 PTGER4P35408 488 aa18.97■□□□□ 0.63
VPS29-206ENST00000549578 LIMS1P48059 325 aa18.97■□□□□ 0.63
VPS29-206ENST00000549578 IST1P53990 364 aa18.97■□□□□ 0.63
VPS29-206ENST00000549578 MBOAT2Q6ZWT7 520 aa18.97■□□□□ 0.63
VPS29-206ENST00000549578 MEX3DQ86XN8 651 aaKnown RBP18.97■□□□□ 0.63
VPS29-206ENST00000549578 OR4C15Q8NGM1 316 aa18.97■□□□□ 0.63
VPS29-206ENST00000549578 MFSD8Q8NHS3 518 aa18.97■□□□□ 0.63
VPS29-206ENST00000549578 ROBO4Q8WZ75 1007 aa18.97■□□□□ 0.63
VPS29-206ENST00000549578 UCN2Q96RP3 112 aa18.97■□□□□ 0.63
VPS29-206ENST00000549578 KLHL4Q9C0H6 718 aa18.97■□□□□ 0.63
VPS29-206ENST00000549578 SH3PXD2BA1X283 911 aa18.96■□□□□ 0.63
VPS29-206ENST00000549578 SLC22A20A6NK97 555 aa18.96■□□□□ 0.63
VPS29-206ENST00000549578 H3BNX3 289 aa18.96■□□□□ 0.63
VPS29-206ENST00000549578 GNGT2O14610 69 aa18.96■□□□□ 0.63
VPS29-206ENST00000549578 OR2T1O43869 369 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms