RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 GLYATQ6IB77 296 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 SSX9Q7RTT3 188 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 SZRD1Q7Z422 152 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 LINC00596Q86U02 117 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 CDC20BQ86Y33 519 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 C20orf196Q8IYI0 205 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 MINDY2Q8NBR6 621 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 EME1Q96AY2 570 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 FOXRED1Q96CU9 486 aaPredicted RBP4.4□□□□□ -1.7
SCAF11-212ENST00000549162 TUBGCP3Q96CW5 907 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 GFM1Q96RP9 751 aaKnown RBP4.4□□□□□ -1.7
SCAF11-212ENST00000549162 PRRG3Q9BZD7 231 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 SEPSECSQ9HD40 501 aaKnown RBP4.4□□□□□ -1.7
SCAF11-212ENST00000549162 KCNK9Q9NPC2 374 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 DECR2Q9NUI1 292 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 FAM118AQ9NWS6 357 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 GAB2Q9UQC2 676 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 EXOSC1Q9Y3B2 195 aaKnown RBP4.4□□□□□ -1.7
SCAF11-212ENST00000549162 ZNF337Q9Y3M9 751 aa4.4□□□□□ -1.7
SCAF11-212ENST00000549162 A0A1B0GVT2 93 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 LDLRAD4O15165 306 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 EIF1BO60739 113 aaKnown RBP4.4□□□□□ -1.71
SCAF11-212ENST00000549162 MTX2O75431 263 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 HMGN1P05114 100 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 TFPIP10646 304 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 PRKCAP17252 672 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 CDH2P19022 906 aaPredicted RBP4.4□□□□□ -1.71
SCAF11-212ENST00000549162 CRHBPP24387 322 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 TAS2R43P59537 309 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 EGR4Q05215 589 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 Q0VFX4 171 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 MAD2L1BPQ15013 274 aaPredicted RBP4.4□□□□□ -1.71
SCAF11-212ENST00000549162 AGKQ53H12 422 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 KHDC1LQ5JSQ8 128 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 LINC01590Q5TEZ4 76 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 CEP68Q76N32 757 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 CYP4Z1Q86W10 505 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 ZNF808Q8N4W9 903 aaPredicted RBP4.4□□□□□ -1.71
SCAF11-212ENST00000549162 OR4A15Q8NGL6 344 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 SLC47A1Q96FL8 570 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 FER1L6-AS2Q96M78 137 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 CSF3RQ99062 836 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 HDHD5Q9BXW7 423 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 TMPRSS13Q9BYE2 586 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 LHPPQ9H008 270 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 HIPK2Q9H2X6 1198 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 DCAF16Q9NXF7 216 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 MYOTQ9UBF9 498 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 UTS2RQ9UKP6 389 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 PACSIN3Q9UKS6 424 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 TCFL5Q9UL49 500 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 WIF1Q9Y5W5 379 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 IGLV1-36A0A0B4J1U3 117 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 TEX51A0A1B0GUA7 166 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 EFCAB10A6NFE3 127 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 FAM90A27PA6NNH2 459 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 ADARB2-AS1A8MUL3 147 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 ITGB1BP1O14713 200 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 PLPP2O43688 288 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 GSTZ1O43708 216 aaPredicted RBP4.4□□□□□ -1.71
SCAF11-212ENST00000549162 PCDH8O95206 1070 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 BRI3O95415 125 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 FESP07332 822 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 CT62P0C5K7 136 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 FAHP16930 419 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 TGFBR2P37173 567 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 GATA4P43694 442 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 DAPP51397 102 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 STPG1Q5TH74 334 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 FOXR1Q6PIV2 292 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 BAIAP2L2Q6UXY1 529 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 H1FNTQ75WM6 255 aaPredicted RBP4.4□□□□□ -1.71
SCAF11-212ENST00000549162 COMTD1Q86VU5 262 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 ADGRG3Q86Y34 549 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 PROKR2Q8NFJ6 384 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 OR4D11Q8NGI4 311 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 KLHL29Q96CT2 875 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 MAP3K3Q99759 626 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 OR51I1Q9H343 314 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 ZNF703Q9H7S9 590 aaPredicted RBP4.4□□□□□ -1.71
SCAF11-212ENST00000549162 NDUFB11Q9NX14 153 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 ZNF226Q9NYT6 803 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.4□□□□□ -1.71
SCAF11-212ENST00000549162 CD84Q9UIB8 345 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 NOSIPQ9Y314 301 aaKnown RBP4.4□□□□□ -1.71
SCAF11-212ENST00000549162 CAB39Q9Y376 341 aaPredicted RBP4.4□□□□□ -1.71
SCAF11-212ENST00000549162 V9GYS6 101 aa4.4□□□□□ -1.71
SCAF11-212ENST00000549162 SPAG17Q6Q759 2223 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 A0A0U1RQV5 110 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 BCKDKO14874 412 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 OR2T1O43869 369 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 CIB2O75838 187 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 ADRB1P08588 477 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 LOXP28300 417 aaPredicted RBP4.39□□□□□ -1.71
SCAF11-212ENST00000549162 CLK3P49761 638 aaKnown RBP4.39□□□□□ -1.71
SCAF11-212ENST00000549162 RAC1P63000 192 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 TUBA1BP68363 451 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 PAX2Q02962 417 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 CHRNEQ04844 493 aa4.39□□□□□ -1.71
SCAF11-212ENST00000549162 MLLT11Q13015 90 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms