RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 ACAA2P42765 397 aaKnown RBP10.07□□□□□ -0.8
BEST3-209ENST00000548658 ATP4BP51164 291 aa10.07□□□□□ -0.8
BEST3-209ENST00000548658 AQP5P55064 265 aa10.07□□□□□ -0.8
BEST3-209ENST00000548658 TGFBR3Q03167 851 aa10.07□□□□□ -0.8
BEST3-209ENST00000548658 PPA1Q15181 289 aa10.07□□□□□ -0.8
BEST3-209ENST00000548658 TSC22D1Q15714 1073 aa10.07□□□□□ -0.8
BEST3-209ENST00000548658 GTDC1Q4AE62 458 aa10.07□□□□□ -0.8
BEST3-209ENST00000548658 ZNF311Q5JNZ3 666 aa10.07□□□□□ -0.8
BEST3-209ENST00000548658 Q5PR19 223 aa10.07□□□□□ -0.8
BEST3-209ENST00000548658 LRIF1Q5T3J3 769 aa10.07□□□□□ -0.8
BEST3-209ENST00000548658 SLC2A7Q6PXP3 512 aa10.07□□□□□ -0.8
BEST3-209ENST00000548658 ZNF836Q6ZNA1 936 aa10.07□□□□□ -0.8
BEST3-209ENST00000548658 VRK2Q86Y07 508 aa10.07□□□□□ -0.8
BEST3-209ENST00000548658 CADM2Q8N3J6 435 aa10.07□□□□□ -0.8
BEST3-209ENST00000548658 BBS10Q8TAM1 723 aa10.07□□□□□ -0.8
BEST3-209ENST00000548658 STON2Q8WXE9 905 aa10.07□□□□□ -0.8
BEST3-209ENST00000548658 AKAP1Q92667 903 aaKnown RBP eCLIP10.07□□□□□ -0.8
BEST3-209ENST00000548658 AURKBQ96GD4 344 aaPredicted RBP10.07□□□□□ -0.8
BEST3-209ENST00000548658 BDH2Q9BUT1 245 aa10.07□□□□□ -0.8
BEST3-209ENST00000548658 SPATA5L1Q9BVQ7 753 aa10.07□□□□□ -0.8
BEST3-209ENST00000548658 TAPBPLQ9BX59 468 aa10.07□□□□□ -0.8
BEST3-209ENST00000548658 PAIP1Q9H074 479 aaKnown RBP10.07□□□□□ -0.8
BEST3-209ENST00000548658 TAS2R16Q9NYV7 291 aa10.07□□□□□ -0.8
BEST3-209ENST00000548658 TRIM33Q9UPN9 1127 aa10.07□□□□□ -0.8
BEST3-209ENST00000548658 GMEB1Q9Y692 573 aa10.07□□□□□ -0.8
BEST3-209ENST00000548658 MAP1AP78559 2803 aaPredicted RBP10.06□□□□□ -0.8
BEST3-209ENST00000548658 CIB4A0PJX0 185 aa10.06□□□□□ -0.8
BEST3-209ENST00000548658 OR5H1A6NKK0 313 aa10.06□□□□□ -0.8
BEST3-209ENST00000548658 CCT8L1PA6NM43 557 aa10.06□□□□□ -0.8
BEST3-209ENST00000548658 CLOCKO15516 846 aa10.06□□□□□ -0.8
BEST3-209ENST00000548658 INHBBP09529 407 aa10.06□□□□□ -0.8
BEST3-209ENST00000548658 GKN3PP0CG01 181 aa10.06□□□□□ -0.8
BEST3-209ENST00000548658 IGHV1-2P23083 117 aa10.06□□□□□ -0.8
BEST3-209ENST00000548658 ADSLP30566 484 aaPredicted RBP10.06□□□□□ -0.8
BEST3-209ENST00000548658 SQLEQ14534 574 aa10.06□□□□□ -0.8
BEST3-209ENST00000548658 STK11Q15831 433 aa10.06□□□□□ -0.8
BEST3-209ENST00000548658 TTMPQ5BVD1 217 aa10.06□□□□□ -0.8
BEST3-209ENST00000548658 TMEM225Q6GV28 225 aa10.06□□□□□ -0.8
BEST3-209ENST00000548658 KLHL17Q6TDP4 642 aa10.06□□□□□ -0.8
BEST3-209ENST00000548658 KRT73Q86Y46 540 aa10.06□□□□□ -0.8
BEST3-209ENST00000548658 FUNDC1Q8IVP5 155 aa10.06□□□□□ -0.8
BEST3-209ENST00000548658 CCDC103Q8IW40 242 aa10.06□□□□□ -0.8
BEST3-209ENST00000548658 ZNF433Q8N7K0 673 aaPredicted RBP10.06□□□□□ -0.8
BEST3-209ENST00000548658 BHLHE22Q8NFJ8 381 aaPredicted RBP10.06□□□□□ -0.8
BEST3-209ENST00000548658 FBXW5Q969U6 566 aa10.06□□□□□ -0.8
BEST3-209ENST00000548658 MAGEB18Q96M61 343 aa10.06□□□□□ -0.8
BEST3-209ENST00000548658 EBF4Q9BQW3 602 aa10.06□□□□□ -0.8
BEST3-209ENST00000548658 SIKE1Q9BRV8 207 aa10.06□□□□□ -0.8
BEST3-209ENST00000548658 FAIMQ9NVQ4 179 aa10.06□□□□□ -0.8
BEST3-209ENST00000548658 UPB1Q9UBR1 384 aa10.06□□□□□ -0.8
BEST3-209ENST00000548658 MALT1Q9UDY8 824 aa10.06□□□□□ -0.8
BEST3-209ENST00000548658 ROS1P08922 2347 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 A0A1W2PP18 115 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 LIPT2A6NK58 231 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 NR5A2O00482 541 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 SERPINB7O75635 380 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 PLAUP00749 431 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 IMPDH2P12268 514 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 GPX2P18283 190 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 PAX7P23759 505 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 PRKAR1BP31321 381 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 PTH2RP49190 550 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 RPS4XP62701 263 aaKnown RBP10.05□□□□□ -0.8
BEST3-209ENST00000548658 BSPH1Q075Z2 132 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 FAPQ12884 760 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 CEACAM7Q14002 265 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 SLC17A1Q14916 467 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 ETFDHQ16134 617 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 AGKQ53H12 422 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 RPS26P11Q5JNZ5 115 aaPredicted RBP10.05□□□□□ -0.8
BEST3-209ENST00000548658 OTUD3Q5T2D3 398 aaPredicted RBP10.05□□□□□ -0.8
BEST3-209ENST00000548658 GCNT6Q5T4J0 391 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 REEP3Q6NUK4 255 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 C5orf46Q6UWT4 87 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 TMEM108Q6UXF1 575 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 ABHD12BQ7Z5M8 362 aaPredicted RBP10.05□□□□□ -0.8
BEST3-209ENST00000548658 YTHDF3Q7Z739 585 aaKnown RBP10.05□□□□□ -0.8
BEST3-209ENST00000548658 KRTAP1-3Q8IUG1 177 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 CLIP4Q8N3C7 705 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 STK35Q8TDR2 534 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 CKAP2Q8WWK9 683 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 IGFBPL1Q8WX77 278 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 MAL2Q969L2 176 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 TMEM45BQ96B21 275 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 TRMT61AQ96FX7 289 aaKnown RBP10.05□□□□□ -0.8
BEST3-209ENST00000548658 PERPQ96FX8 193 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 MUS81Q96NY9 551 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 EVA1AQ9H8M9 152 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 C12orf10Q9HB07 376 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 MRGBPQ9NV56 204 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 ZNF701Q9NV72 531 aaPredicted RBP10.05□□□□□ -0.8
BEST3-209ENST00000548658 SLC25A37Q9NYZ2 338 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 RPS6KB2Q9UBS0 482 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 MGAT4BQ9UQ53 548 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 LAMP3Q9UQV4 416 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 FLVCR1Q9Y5Y0 555 aa10.05□□□□□ -0.8
BEST3-209ENST00000548658 MTORP42345 2549 aa10.04□□□□□ -0.8
BEST3-209ENST00000548658 RAI1Q7Z5J4 1906 aaPredicted RBP10.04□□□□□ -0.8
BEST3-209ENST00000548658 ZC3H12DA2A288 527 aaKnown RBP10.04□□□□□ -0.8
BEST3-209ENST00000548658 PRORSD1PA6NEY8 169 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms