RNA–Protein interactions for RNA: ENST00000548247.1

RACGAP1-211, Transcript of Rac GTPase activating protein 1, human

TSL 4

Gene RACGAP1, Length 564 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACGAP1-211	ENST00000548247	TXNL4A	P83876	142 aa	Known RBP	11.59	□□□□□ -0.55
RACGAP1-211	ENST00000548247	LRRC74A	Q0VAA2	488 aa		11.59	□□□□□ -0.55
RACGAP1-211	ENST00000548247	SYPL1	Q16563	259 aa		11.59	□□□□□ -0.55
RACGAP1-211	ENST00000548247	BEND6	Q5SZJ8	279 aa	Predicted RBP	11.59	□□□□□ -0.55
RACGAP1-211	ENST00000548247	TMPPE	Q6ZT21	453 aa		11.59	□□□□□ -0.55
RACGAP1-211	ENST00000548247		Q6ZT83	130 aa		11.59	□□□□□ -0.55
RACGAP1-211	ENST00000548247	ANKFN1	Q8N957	763 aa		11.59	□□□□□ -0.55
RACGAP1-211	ENST00000548247	GLB1L3	Q8NCI6	653 aa	Predicted RBP	11.59	□□□□□ -0.55
RACGAP1-211	ENST00000548247	ZNF563	Q8TA94	476 aa		11.59	□□□□□ -0.55
RACGAP1-211	ENST00000548247	TRNT1	Q96Q11	434 aa	Known RBP	11.59	□□□□□ -0.55
RACGAP1-211	ENST00000548247	PSD2	Q9BQI7	771 aa		11.59	□□□□□ -0.55
RACGAP1-211	ENST00000548247	BCO1	Q9HAY6	547 aa		11.59	□□□□□ -0.55
RACGAP1-211	ENST00000548247	TMBIM4	Q9HC24	238 aa		11.59	□□□□□ -0.55
RACGAP1-211	ENST00000548247	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	11.59	□□□□□ -0.55
RACGAP1-211	ENST00000548247	ING1	Q9UK53	422 aa	Predicted RBP	11.59	□□□□□ -0.55
RACGAP1-211	ENST00000548247	CLDN24	A6NM45	220 aa		11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	SULT2B1	O00204	365 aa		11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	SMAD9	O15198	467 aa	Known RBP	11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	CYTIP	O60759	359 aa		11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	SLC22A3	O75751	556 aa		11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	TGFA	P01135	160 aa		11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	CHRM4	P08173	479 aa		11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	IDO1	P14902	403 aa		11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	DIO1	P49895	249 aa		11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	ANXA11	P50995	505 aa	Known RBP	11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	PLAUR	Q03405	335 aa		11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	RASGEF1B	Q0VAM2	473 aa		11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	CR1L	Q2VPA4	569 aa		11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	SLC9B1	Q4ZJI4	515 aa		11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	PDCD4	Q53EL6	469 aa	Known RBP	11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	SYT14P1	Q58G82	188 aa		11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	COX20	Q5RI15	118 aa		11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	SLC22A25	Q6T423	547 aa		11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	MAVS	Q7Z434	540 aa		11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	FBXL14	Q8N1E6	418 aa		11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	DEPDC4	Q8N2C3	294 aa		11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	ARFGAP2	Q8N6H7	521 aa		11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	PNPT1	Q8TCS8	783 aa	Known RBP	11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	SLC25A43	Q8WUT9	341 aa	Predicted RBP	11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	CNOT9	Q92600	299 aa	Known RBP	11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	C3orf49	Q96BT1	292 aa		11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	ZNF775	Q96BV0	537 aa	Predicted RBP	11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	MUCL1	Q96DR8	90 aa		11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	RADIL	Q96JH8	1075 aa		11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	MAEL	Q96JY0	434 aa	Known RBP	11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	SOX7	Q9BT81	388 aa		11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	CCDC106	Q9BWC9	280 aa		11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	SLC38A1	Q9H2H9	487 aa		11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	EXOSC3	Q9NQT5	275 aa	Known RBP	11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	CTPS2	Q9NRF8	586 aa		11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	POU2F3	Q9UKI9	436 aa		11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	SPIN1	Q9Y657	262 aa	Predicted RBP	11.58	□□□□□ -0.56
RACGAP1-211	ENST00000548247	ARFGEF3	Q5TH69	2177 aa		11.57	□□□□□ -0.56
RACGAP1-211	ENST00000548247	IGHV4-61	A0A0C4DH41	118 aa		11.57	□□□□□ -0.56
RACGAP1-211	ENST00000548247	RFXANK	O14593	260 aa		11.57	□□□□□ -0.56
RACGAP1-211	ENST00000548247	KRT75	O95678	551 aa		11.57	□□□□□ -0.56
RACGAP1-211	ENST00000548247	IL6	P05231	212 aa		11.57	□□□□□ -0.56
RACGAP1-211	ENST00000548247	CSF3	P09919	207 aa		11.57	□□□□□ -0.56
RACGAP1-211	ENST00000548247	TFPI	P10646	304 aa		11.57	□□□□□ -0.56
RACGAP1-211	ENST00000548247	APEH	P13798	732 aa	Known RBP	11.57	□□□□□ -0.56
RACGAP1-211	ENST00000548247	IGHV1-2	P23083	117 aa		11.57	□□□□□ -0.56
RACGAP1-211	ENST00000548247	NR4A2	P43354	598 aa		11.57	□□□□□ -0.56
RACGAP1-211	ENST00000548247	OR3A2	P47893	321 aa		11.57	□□□□□ -0.56
RACGAP1-211	ENST00000548247	FABP6	P51161	128 aa		11.57	□□□□□ -0.56
RACGAP1-211	ENST00000548247	CSNK2A1	P68400	391 aa	Predicted RBP	11.57	□□□□□ -0.56
RACGAP1-211	ENST00000548247	TIMM23B	Q5SRD1	257 aa		11.57	□□□□□ -0.56
RACGAP1-211	ENST00000548247	LRRC74B	Q6ZQY2	392 aa		11.57	□□□□□ -0.56
RACGAP1-211	ENST00000548247	GRINA	Q7Z429	371 aa		11.57	□□□□□ -0.56
RACGAP1-211	ENST00000548247	ZNF300	Q96RE9	604 aa	Predicted RBP	11.57	□□□□□ -0.56
RACGAP1-211	ENST00000548247	MTHFD2L	Q9H903	347 aa	Predicted RBP	11.57	□□□□□ -0.56
RACGAP1-211	ENST00000548247	ZIM2	Q9NZV7	527 aa		11.57	□□□□□ -0.56
RACGAP1-211	ENST00000548247	CHRNA9	Q9UGM1	479 aa		11.57	□□□□□ -0.56
RACGAP1-211	ENST00000548247	CMYA5	Q8N3K9	4069 aa		11.56	□□□□□ -0.56
RACGAP1-211	ENST00000548247	AGAP5	A6NIR3	686 aa		11.56	□□□□□ -0.56
RACGAP1-211	ENST00000548247	ZNF724	A8MTY0	619 aa		11.56	□□□□□ -0.56
RACGAP1-211	ENST00000548247	AP3D1	O14617	1153 aa		11.56	□□□□□ -0.56
RACGAP1-211	ENST00000548247	KLF11	O14901	512 aa		11.56	□□□□□ -0.56
RACGAP1-211	ENST00000548247	PGM3	O95394	542 aa		11.56	□□□□□ -0.56
RACGAP1-211	ENST00000548247	NR2F1	P10589	423 aa		11.56	□□□□□ -0.56
RACGAP1-211	ENST00000548247	GGT1	P19440	569 aa		11.56	□□□□□ -0.56
RACGAP1-211	ENST00000548247	RPS4Y1	P22090	263 aa	Known RBP	11.56	□□□□□ -0.56
RACGAP1-211	ENST00000548247	FKBP2	P26885	142 aa	Known RBP	11.56	□□□□□ -0.56
RACGAP1-211	ENST00000548247	IDH2	P48735	452 aa	Known RBP	11.56	□□□□□ -0.56
RACGAP1-211	ENST00000548247	GNA13	Q14344	377 aa		11.56	□□□□□ -0.56
RACGAP1-211	ENST00000548247	GSTA3	Q16772	222 aa		11.56	□□□□□ -0.56
RACGAP1-211	ENST00000548247	ABLIM2	Q6H8Q1	611 aa		11.56	□□□□□ -0.56
RACGAP1-211	ENST00000548247	TMEM108	Q6UXF1	575 aa		11.56	□□□□□ -0.56
RACGAP1-211	ENST00000548247	GALNT5	Q7Z7M9	940 aa		11.56	□□□□□ -0.56
RACGAP1-211	ENST00000548247	MTDH	Q86UE4	582 aa	Known RBP	11.56	□□□□□ -0.56
RACGAP1-211	ENST00000548247	ADGRG3	Q86Y34	549 aa		11.56	□□□□□ -0.56
RACGAP1-211	ENST00000548247	CMIP	Q8IY22	773 aa		11.56	□□□□□ -0.56
RACGAP1-211	ENST00000548247	WDR60	Q8WVS4	1066 aa		11.56	□□□□□ -0.56
RACGAP1-211	ENST00000548247	ZNF75CP	Q92670	426 aa	Predicted RBP	11.56	□□□□□ -0.56
RACGAP1-211	ENST00000548247	OR52B2	Q96RD2	323 aa		11.56	□□□□□ -0.56
RACGAP1-211	ENST00000548247	OR11A1	Q9GZK7	315 aa		11.56	□□□□□ -0.56
RACGAP1-211	ENST00000548247	SDR39U1	Q9NRG7	319 aa	Predicted RBP	11.56	□□□□□ -0.56
RACGAP1-211	ENST00000548247	SLC6A13	Q9NSD5	602 aa		11.56	□□□□□ -0.56
RACGAP1-211	ENST00000548247	HEATR1	Q9H583	2144 aa	Known RBP	11.56	□□□□□ -0.56
RACGAP1-211	ENST00000548247	PRKDC	P78527	4128 aa	Known RBP	11.55	□□□□□ -0.56
RACGAP1-211	ENST00000548247	OR5H1	A6NKK0	313 aa		11.55	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 44 ms