RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 CD79BP40259 229 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 STARP49675 285 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 HNRNPFP52597 415 aaKnown RBP3.66□□□□□ -1.82
CBX5-203ENST00000547872 MTTPP55157 894 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 TBPL1P62380 186 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 UBE2V1Q13404 147 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 DOC2AQ14183 400 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 SQLEQ14534 574 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 ITIH4Q14624 930 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 TSC22D1Q15714 1073 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 FASTKD1Q53R41 847 aaKnown RBP3.66□□□□□ -1.82
CBX5-203ENST00000547872 OTUD3Q5T2D3 398 aaPredicted RBP3.66□□□□□ -1.82
CBX5-203ENST00000547872 CCNYL2Q5T2Q4 361 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 SLC22A10Q63ZE4 541 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 KCTD11Q693B1 232 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 CAPN13Q6MZZ7 669 aaPredicted RBP3.66□□□□□ -1.82
CBX5-203ENST00000547872 PPP1R2P3Q6NXS1 205 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 ENPP6Q6UWR7 440 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 MFSD7Q6UXD7 560 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 PACS1Q6VY07 963 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 HSDL2Q6YN16 418 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 MBOAT1Q6ZNC8 495 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 CLEC17AQ6ZS10 378 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 Q75L30 129 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 CTAGE4Q8IX94 777 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 PRR22Q8IZ63 422 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 NIPA2Q8N8Q9 360 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 MLKLQ8NB16 471 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 CAMKVQ8NCB2 501 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 MCUQ8NE86 351 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 PLPP5Q8NEB5 264 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 OR9A1PQ8NGU1 263 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 SMPDL3AQ92484 453 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 P3H4Q92791 437 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 NXNL1Q96CM4 212 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 PGM2Q96G03 612 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 ST6GAL2Q96JF0 529 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 DDOQ99489 341 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 FERMT1Q9BQL6 677 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 SRSF8Q9BRL6 282 aaKnown RBP3.66□□□□□ -1.82
CBX5-203ENST00000547872 METTL17Q9H7H0 456 aaPredicted RBP3.66□□□□□ -1.82
CBX5-203ENST00000547872 PRTFDC1Q9NRG1 225 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 NLE1Q9NVX2 485 aaPredicted RBP3.66□□□□□ -1.82
CBX5-203ENST00000547872 AIPL1Q9NZN9 384 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 RCC2Q9P258 522 aaKnown RBP3.66□□□□□ -1.82
CBX5-203ENST00000547872 CLEC4AQ9UMR7 237 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 CLCA3PQ9Y6N3 262 aa3.66□□□□□ -1.82
CBX5-203ENST00000547872 CNTRLQ7Z7A1 2325 aa3.65□□□□□ -1.82
CBX5-203ENST00000547872 SVEP1Q4LDE5 3571 aa3.65□□□□□ -1.82
CBX5-203ENST00000547872 ZNF407Q9C0G0 2248 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 TRBV5-4A0A0C4DH59 114 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 A0A1W2PNV4 684 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 C17orf105B2RV13 164 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 E5RI56 91 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 J3QR06 171 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 LCMT2O60294 686 aaKnown RBP3.65□□□□□ -1.83
CBX5-203ENST00000547872 GALR3O60755 368 aaPredicted RBP3.65□□□□□ -1.83
CBX5-203ENST00000547872 ANXA9O76027 345 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 PROSCO94903 275 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 SLC16A8O95907 504 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 TGM6O95932 706 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 ALOX12P18054 663 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 LOXP28300 417 aaPredicted RBP3.65□□□□□ -1.83
CBX5-203ENST00000547872 PSMB10P40306 273 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 CLNS1AP54105 237 aaKnown RBP3.65□□□□□ -1.83
CBX5-203ENST00000547872 RPS15AP62244 130 aaKnown RBP3.65□□□□□ -1.83
CBX5-203ENST00000547872 BTN3A2P78410 334 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 CCZ1BP86790 482 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 CCZ1P86791 482 aaPredicted RBP3.65□□□□□ -1.83
CBX5-203ENST00000547872 VLDLRP98155 873 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 PLOD1Q02809 727 aaPredicted RBP3.65□□□□□ -1.83
CBX5-203ENST00000547872 PRDX1Q06830 199 aaKnown RBP3.65□□□□□ -1.83
CBX5-203ENST00000547872 KCNJ11Q14654 390 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 HERC3Q15034 1050 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 NNATQ16517 81 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 KLHL38Q2WGJ6 581 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 IQCCQ4KMZ1 466 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 ANKRD20A4Q4UJ75 823 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 ACSBG2Q5FVE4 666 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 BEX5Q5H9J7 111 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 TOR1AIP1Q5JTV8 583 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 ANKRD20A2Q5SQ80 823 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 ANKRD20A1Q5TYW2 823 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 ANKRD20A3Q5VUR7 823 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 ITPRIPL1Q6GPH6 555 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 OPN5Q6U736 354 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 AFTPHQ6ULP2 937 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 CHMP1BQ7LBR1 199 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 PIWIL4Q7Z3Z4 852 aaKnown RBP3.65□□□□□ -1.83
CBX5-203ENST00000547872 GALNT5Q7Z7M9 940 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 GPALPP1Q8IXQ4 340 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 RCOR2Q8IZ40 523 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 ZNF611Q8N823 705 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 RBM15BQ8NDT2 890 aaKnown RBP3.65□□□□□ -1.83
CBX5-203ENST00000547872 SMAP2Q8WU79 429 aaPredicted RBP3.65□□□□□ -1.83
CBX5-203ENST00000547872 TAF15Q92804 592 aaKnown RBP eCLIP3.65□□□□□ -1.83
CBX5-203ENST00000547872 PYCR2Q96C36 320 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 FBXO17Q96EF6 278 aa3.65□□□□□ -1.83
CBX5-203ENST00000547872 SAT2Q96F10 170 aaPredicted RBP3.65□□□□□ -1.83
CBX5-203ENST00000547872 TSNARE1Q96NA8 513 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms