RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 SNX4O95219 450 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 AHSA1O95433 338 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 BCL10O95999 233 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 SERPINA7P05543 415 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 CD36P16671 472 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 ADH6P28332 368 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 RBMS1P29558 406 aaKnown RBP12.23□□□□□ -0.45
PTCH1-215ENST00000547672 OTX2P32243 289 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 NBL1P41271 181 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 SERPINB10P48595 397 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 MASP1P48740 699 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 LIMK1P53667 647 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 RPS4XP62701 263 aaKnown RBP12.23□□□□□ -0.45
PTCH1-215ENST00000547672 TUBA1BP68363 451 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 CHAF1BQ13112 559 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 ITGADQ13349 1161 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 LSAMPQ13449 338 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 DNASE1L3Q13609 305 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 IL10RAQ13651 578 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 MED22Q15528 200 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 SLC25A53Q5H9E4 307 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 ARMCX4Q5H9R4 360 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 SLC35D3Q5M8T2 416 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 FAM69AQ5T7M9 428 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 SLC22A10Q63ZE4 541 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 DHRS13Q6UX07 377 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 TUBA1AQ71U36 451 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 NANOGNBQ7Z5D8 188 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 OR52I1Q8NGK6 324 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 OTULINQ96BN8 352 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 YIPF6Q96EC8 236 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 MGLLQ99685 303 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 ASPNQ9BXN1 380 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 POTEKPQ9BYX7 375 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 TIMMDC1Q9NPL8 285 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 NRIP3Q9NQ35 241 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 HAO2Q9NYQ3 351 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 ABI3Q9P2A4 366 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 TNFRSF10DQ9UBN6 386 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 SEC14L4Q9UDX3 406 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 WIF1Q9Y5W5 379 aa12.23□□□□□ -0.45
PTCH1-215ENST00000547672 IGKV1D-42A0A075B6H8 117 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 TRIM64BA6NI03 449 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 M0R129 80 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 ETV2O00321 342 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-215ENST00000547672 CCRL2O00421 344 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 SUSD5O60279 629 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 TNFSF15O95150 251 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 GABARAPO95166 117 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 CD14P08571 375 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 ASAH2BP0C7U1 165 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 ADORA3P0DMS8 318 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 CSRP1P21291 193 aaKnown RBP12.22□□□□□ -0.45
PTCH1-215ENST00000547672 CASP3P42574 277 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 CENPAP49450 140 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 GAS1P54826 345 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 MLF1P58340 268 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 ACTC1P68032 377 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 ACTA1P68133 377 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 DYNC1I2Q13409 638 aaKnown RBP12.22□□□□□ -0.45
PTCH1-215ENST00000547672 PON3Q15166 354 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 ALG10Q5BKT4 473 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 H3F3CQ6NXT2 135 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 PLBD1Q6P4A8 553 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 LYPD8Q6UX82 237 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 LINC00299Q6ZSB3 139 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 SLC46A3Q7Z3Q1 461 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 PPP1R32Q7Z5V6 425 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 FAM98AQ8NCA5 519 aaKnown RBP12.22□□□□□ -0.45
PTCH1-215ENST00000547672 OR4K17Q8NGC6 315 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 SLC25A43Q8WUT9 341 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-215ENST00000547672 KIAA1143Q96AT1 154 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-215ENST00000547672 LGALS12Q96DT0 336 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 RNF31Q96EP0 1072 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 CDCP1Q9H5V8 836 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 ZNF160Q9HCG1 818 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 SACM1LQ9NTJ5 587 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 HPF1Q9NWY4 346 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 GRHPRQ9UBQ7 328 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 CHRNA9Q9UGM1 479 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 MOKQ9UQ07 419 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 GPR52Q9Y2T5 361 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 IER3IP1Q9Y5U9 82 aa12.22□□□□□ -0.45
PTCH1-215ENST00000547672 TEX51A0A1B0GUA7 166 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 BLOC1S5-TXNDC5H3BN57 136 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 RAD1O60671 282 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 DKK1O94907 266 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 NTN1O95631 604 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 PPP1R3DO95685 299 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 TXNDC12O95881 172 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 SCG5P05408 212 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 LCKP06239 509 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 PSMA1P25786 263 aaKnown RBP12.21□□□□□ -0.45
PTCH1-215ENST00000547672 GTF2E2P29084 291 aaKnown RBP12.21□□□□□ -0.45
PTCH1-215ENST00000547672 DLSTP36957 453 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 RGS6P49758 472 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 BLVRAP53004 296 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 FOXL2P58012 376 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 FXYD6P3P58550 94 aa12.21□□□□□ -0.45
PTCH1-215ENST00000547672 MLLT11Q13015 90 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms