RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 LCLAT1Q6UWP7 414 aa3.53□□□□□ -1.84
SCAF11-210ENST00000547654 SLC26A9Q7LBE3 791 aa3.53□□□□□ -1.84
SCAF11-210ENST00000547654 NUFIP2Q7Z417 695 aaKnown RBP3.53□□□□□ -1.84
SCAF11-210ENST00000547654 SCD5Q86SK9 330 aa3.53□□□□□ -1.84
SCAF11-210ENST00000547654 MYPOPQ86VE0 399 aaPredicted RBP3.53□□□□□ -1.84
SCAF11-210ENST00000547654 TRIM69Q86WT6 500 aa3.53□□□□□ -1.84
SCAF11-210ENST00000547654 OR4D9Q8NGE8 314 aa3.53□□□□□ -1.84
SCAF11-210ENST00000547654 OR10V1Q8NGI7 309 aa3.53□□□□□ -1.84
SCAF11-210ENST00000547654 HCAR2Q8TDS4 363 aa3.53□□□□□ -1.84
SCAF11-210ENST00000547654 RAB3CQ96E17 227 aa3.53□□□□□ -1.84
SCAF11-210ENST00000547654 ZNF641Q96N77 438 aaPredicted RBP3.53□□□□□ -1.84
SCAF11-210ENST00000547654 GAL3ST1Q99999 423 aa3.53□□□□□ -1.84
SCAF11-210ENST00000547654 MAPKAP1Q9BPZ7 522 aa3.53□□□□□ -1.84
SCAF11-210ENST00000547654 RBM4Q9BWF3 364 aaKnown RBP3.53□□□□□ -1.84
SCAF11-210ENST00000547654 TEKT3Q9BXF9 490 aa3.53□□□□□ -1.84
SCAF11-210ENST00000547654 ROGDIQ9GZN7 287 aa3.53□□□□□ -1.84
SCAF11-210ENST00000547654 IKZF5Q9H5V7 419 aa3.53□□□□□ -1.84
SCAF11-210ENST00000547654 SMYD3Q9H7B4 428 aa3.53□□□□□ -1.84
SCAF11-210ENST00000547654 MRPS30Q9NP92 439 aaKnown RBP3.53□□□□□ -1.84
SCAF11-210ENST00000547654 CCNB1IP1Q9NPC3 277 aa3.53□□□□□ -1.84
SCAF11-210ENST00000547654 DEPPQ9NTK1 212 aa3.53□□□□□ -1.84
SCAF11-210ENST00000547654 LYARQ9NX58 379 aaKnown RBP3.53□□□□□ -1.84
SCAF11-210ENST00000547654 AHSPQ9NZD4 102 aa3.53□□□□□ -1.84
SCAF11-210ENST00000547654 TMCO1Q9UM00 188 aa3.53□□□□□ -1.84
SCAF11-210ENST00000547654 SBF2Q86WG5 1849 aa3.53□□□□□ -1.84
SCAF11-210ENST00000547654 XRN1Q8IZH2 1706 aaKnown RBP3.53□□□□□ -1.85
SCAF11-210ENST00000547654 ABCC5O15440 1437 aa3.53□□□□□ -1.85
SCAF11-210ENST00000547654 DCCP43146 1447 aa3.53□□□□□ -1.85
SCAF11-210ENST00000547654 LOC100506127A0A0U1RQW1 187 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 IQANK1A0A1B0GTG1 560 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 A0A1B0GU03 582 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 FAM172BPA6NC97 362 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 A8MXQ7 604 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 SLCO1B7G3V0H7 640 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 H3BMQ9 156 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 CLOCKO15516 846 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 PSTPIP1O43586 416 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 UGT2B17O75795 530 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 TMEM50AO95807 157 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 IGHG3P01860 377 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 MBP02144 154 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 GAPDHP04406 335 aaKnown RBP3.52□□□□□ -1.85
SCAF11-210ENST00000547654 CRYGCP07315 174 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 CCNB1P14635 433 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 PTNP21246 168 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 U2AF2P26368 475 aaKnown RBP eCLIP3.52□□□□□ -1.851e-7■■■□□ 15.1
SCAF11-210ENST00000547654 GTF2E2P29084 291 aaKnown RBP3.52□□□□□ -1.85
SCAF11-210ENST00000547654 PDHA2P29803 388 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 MAP3K8P41279 467 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 RFX3P48380 749 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 POU3F4P49335 361 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 MFAP2P55001 183 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 DAOAP59103 153 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 SNRPD1P62314 119 aaKnown RBP3.52□□□□□ -1.85
SCAF11-210ENST00000547654 RPL8P62917 257 aaKnown RBP3.52□□□□□ -1.85
SCAF11-210ENST00000547654 KCNJ2P63252 427 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 CYCSP99999 105 aaKnown RBP3.52□□□□□ -1.85
SCAF11-210ENST00000547654 PAX5Q02548 391 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 LIPEQ05469 1076 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 CUL1Q13616 776 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 LAGE3Q14657 143 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 SYCP1Q15431 976 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 ZIC1Q15915 447 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 TRIM16LQ309B1 348 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 HLA-BQ31612 363 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 MS4A18Q3C1V0 323 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 Q3ZCU0 254 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 SEL1L2Q5TEA6 688 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 WSCD1Q658N2 575 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 TMEM220Q6QAJ8 160 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 C19orf48Q6RUI8 117 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 LRRC31Q6UY01 552 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 MARCH9Q86YJ5 346 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 OR4K14Q8NGD5 310 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 RFESDQ8TAC1 157 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 MRPS31Q92665 395 aaKnown RBP3.52□□□□□ -1.85
SCAF11-210ENST00000547654 NRGNQ92686 78 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 UBE2E3Q969T4 207 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 PLEKHA8Q96JA3 519 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 PRAC1Q96KF2 57 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 SLC35A5Q9BS91 424 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 CLEC7AQ9BXN2 247 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 PPA2Q9H2U2 334 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 ELOVL6Q9H5J4 265 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 IL1RAPQ9NPH3 570 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 ZNF71Q9NQZ8 489 aaPredicted RBP3.52□□□□□ -1.85
SCAF11-210ENST00000547654 NANSQ9NR45 359 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 SPHK2Q9NRA0 654 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 NUDT15Q9NV35 164 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 MTCH1Q9NZJ7 389 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 THYN1Q9P016 225 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 NUP50Q9UKX7 468 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 SCML2Q9UQR0 700 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 FBXO7Q9Y3I1 522 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 BZW2Q9Y6E2 419 aaKnown RBP3.52□□□□□ -1.85
SCAF11-210ENST00000547654 SMCHD1A6NHR9 2005 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 ADAMTS7Q9UKP4 1686 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 FMN1Q68DA7 1419 aa3.52□□□□□ -1.85
SCAF11-210ENST00000547654 IGHV3-20A0A0C4DH32 117 aa3.51□□□□□ -1.85
SCAF11-210ENST00000547654 IGHV2-70DA0A0C4DH43 119 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms