RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 AQP1P29972 269 aa14.09□□□□□ -0.15
DDX54-204ENST00000546898 RGS8P57771 180 aaPredicted RBP14.09□□□□□ -0.15
DDX54-204ENST00000546898 NCALDP61601 193 aa14.09□□□□□ -0.15
DDX54-204ENST00000546898 ITGADQ13349 1161 aa14.09□□□□□ -0.15
DDX54-204ENST00000546898 CAPRIN1Q14444 709 aaKnown RBP14.09□□□□□ -0.15
DDX54-204ENST00000546898 SFRP5Q5T4F7 317 aa14.09□□□□□ -0.15
DDX54-204ENST00000546898 INTS11Q5TA45 600 aaKnown RBP14.09□□□□□ -0.15
DDX54-204ENST00000546898 ANKRD34AQ69YU3 496 aa14.09□□□□□ -0.15
DDX54-204ENST00000546898 REP15Q6BDI9 236 aa14.09□□□□□ -0.15
DDX54-204ENST00000546898 C5orf46Q6UWT4 87 aa14.09□□□□□ -0.15
DDX54-204ENST00000546898 PATL1Q86TB9 770 aaKnown RBP14.09□□□□□ -0.15
DDX54-204ENST00000546898 CXorf67Q86X51 503 aaPredicted RBP14.09□□□□□ -0.15
DDX54-204ENST00000546898 ZNF100Q8IYN0 542 aa14.09□□□□□ -0.15
DDX54-204ENST00000546898 OR8J3Q8NGG0 315 aa14.09□□□□□ -0.15
DDX54-204ENST00000546898 KISS1RQ969F8 398 aaPredicted RBP14.09□□□□□ -0.15
DDX54-204ENST00000546898 ZC3HAV1LQ96H79 300 aaKnown RBP14.09□□□□□ -0.15
DDX54-204ENST00000546898 TAPBPLQ9BX59 468 aa14.09□□□□□ -0.15
DDX54-204ENST00000546898 RSPO3Q9BXY4 272 aaPredicted RBP14.09□□□□□ -0.15
DDX54-204ENST00000546898 PLEKHF2Q9H8W4 249 aa14.09□□□□□ -0.15
DDX54-204ENST00000546898 C6orf203Q9P0P8 240 aaPredicted RBP14.09□□□□□ -0.15
DDX54-204ENST00000546898 SLC9A8Q9Y2E8 581 aa14.09□□□□□ -0.15
DDX54-204ENST00000546898 NOSIPQ9Y314 301 aaKnown RBP14.09□□□□□ -0.15
DDX54-204ENST00000546898 AKAP9Q99996 3911 aa14.09□□□□□ -0.15
DDX54-204ENST00000546898 RAI1Q7Z5J4 1906 aaPredicted RBP14.09□□□□□ -0.15
DDX54-204ENST00000546898 PRR14LQ5THK1 2151 aa14.09□□□□□ -0.15
DDX54-204ENST00000546898 F8P00451 2351 aa14.08□□□□□ -0.16
DDX54-204ENST00000546898 ZNF814B7Z6K7 855 aa14.08□□□□□ -0.16
DDX54-204ENST00000546898 FXYD1O00168 92 aa14.08□□□□□ -0.16
DDX54-204ENST00000546898 MRASO14807 208 aa14.08□□□□□ -0.16
DDX54-204ENST00000546898 SIAH2O43255 324 aa14.08□□□□□ -0.16
DDX54-204ENST00000546898 TPST1O60507 370 aa14.08□□□□□ -0.16
DDX54-204ENST00000546898 MFN2O95140 757 aa14.08□□□□□ -0.16
DDX54-204ENST00000546898 ADAP00813 363 aa14.08□□□□□ -0.16
DDX54-204ENST00000546898 RAF1P04049 648 aa14.08□□□□□ -0.16
DDX54-204ENST00000546898 THBDP07204 575 aa14.08□□□□□ -0.16
DDX54-204ENST00000546898 DNASE1P24855 282 aa14.08□□□□□ -0.16
DDX54-204ENST00000546898 PCGF2P35227 344 aa14.08□□□□□ -0.16
DDX54-204ENST00000546898 HOXC5Q00444 222 aa14.08□□□□□ -0.16
DDX54-204ENST00000546898 SF3A3Q12874 501 aaKnown RBP eCLIP14.08□□□□□ -0.16
DDX54-204ENST00000546898 BNIP2Q12982 314 aa14.08□□□□□ -0.16
DDX54-204ENST00000546898 CEACAM7Q14002 265 aa14.08□□□□□ -0.16
DDX54-204ENST00000546898 TESK1Q15569 626 aa14.08□□□□□ -0.16
DDX54-204ENST00000546898 OR7A5Q15622 319 aa14.08□□□□□ -0.16
DDX54-204ENST00000546898 GLIPR1L2Q4G1C9 344 aa14.08□□□□□ -0.16
DDX54-204ENST00000546898 BEX5Q5H9J7 111 aa14.08□□□□□ -0.16
DDX54-204ENST00000546898 OTUD3Q5T2D3 398 aaPredicted RBP14.08□□□□□ -0.16
DDX54-204ENST00000546898 C1orf140Q5VVS0 124 aa14.08□□□□□ -0.16
DDX54-204ENST00000546898 FAM91A1Q658Y4 838 aa14.08□□□□□ -0.16
DDX54-204ENST00000546898 NANOGP8Q6NSW7 305 aa14.08□□□□□ -0.16
DDX54-204ENST00000546898 C22orf34Q6ZV56 151 aa14.08□□□□□ -0.16
DDX54-204ENST00000546898 COMTD1Q86VU5 262 aa14.08□□□□□ -0.16
DDX54-204ENST00000546898 SNX32Q86XE0 403 aa14.08□□□□□ -0.16
DDX54-204ENST00000546898 CCDC103Q8IW40 242 aa14.08□□□□□ -0.16
DDX54-204ENST00000546898 PCYOX1LQ8NBM8 494 aa14.08□□□□□ -0.16
DDX54-204ENST00000546898 OR52E4Q8NGH9 312 aa14.08□□□□□ -0.16
DDX54-204ENST00000546898 OR10A6Q8NH74 314 aa14.08□□□□□ -0.16
DDX54-204ENST00000546898 DNAJA4Q8WW22 397 aaPredicted RBP14.08□□□□□ -0.16
DDX54-204ENST00000546898 APH1AQ96BI3 265 aa14.08□□□□□ -0.16
DDX54-204ENST00000546898 LRRC58Q96CX6 371 aa14.08□□□□□ -0.16
DDX54-204ENST00000546898 PIK3IP1Q96FE7 263 aa14.08□□□□□ -0.16
DDX54-204ENST00000546898 SF3B5Q9BWJ5 86 aaKnown RBP14.08□□□□□ -0.16
DDX54-204ENST00000546898 PIF1Q9H611 641 aa14.08□□□□□ -0.16
DDX54-204ENST00000546898 NANOGQ9H9S0 305 aa14.08□□□□□ -0.16
DDX54-204ENST00000546898 PRSS50Q9UI38 385 aa14.08□□□□□ -0.16
DDX54-204ENST00000546898 A0A1B0GWA3 101 aa14.07□□□□□ -0.16
DDX54-204ENST00000546898 AQP7P3A6NL99 342 aa14.07□□□□□ -0.16
DDX54-204ENST00000546898 ELOA3DA6NLF2 546 aaPredicted RBP14.07□□□□□ -0.16
DDX54-204ENST00000546898 RAMP1O60894 148 aa14.07□□□□□ -0.16
DDX54-204ENST00000546898 MRPL33O75394 65 aaKnown RBP14.07□□□□□ -0.16
DDX54-204ENST00000546898 VAMP5O95183 116 aa14.07□□□□□ -0.16
DDX54-204ENST00000546898 AHSA1O95433 338 aa14.07□□□□□ -0.16
DDX54-204ENST00000546898 C8BP07358 591 aa14.07□□□□□ -0.16
DDX54-204ENST00000546898 PNMTP11086 282 aa14.07□□□□□ -0.16
DDX54-204ENST00000546898 COX5AP20674 150 aa14.07□□□□□ -0.16
DDX54-204ENST00000546898 HTR2AP28223 471 aa14.07□□□□□ -0.16
DDX54-204ENST00000546898 IST1P53990 364 aa14.07□□□□□ -0.16
DDX54-204ENST00000546898 NR1H2P55055 460 aa14.07□□□□□ -0.16
DDX54-204ENST00000546898 DMTNQ08495 405 aa14.07□□□□□ -0.16
DDX54-204ENST00000546898 SLC17A1Q14916 467 aa14.07□□□□□ -0.16
DDX54-204ENST00000546898 VMACQ2NL98 169 aa14.07□□□□□ -0.16
DDX54-204ENST00000546898 ELOA3BQ3SY89 546 aa14.07□□□□□ -0.16
DDX54-204ENST00000546898 ULK3Q6PHR2 472 aa14.07□□□□□ -0.16
DDX54-204ENST00000546898 SSX8Q7RTT4 187 aa14.07□□□□□ -0.16
DDX54-204ENST00000546898 RANBP3LQ86VV4 465 aaPredicted RBP14.07□□□□□ -0.16
DDX54-204ENST00000546898 ELOA3Q8NG57 546 aa14.07□□□□□ -0.16
DDX54-204ENST00000546898 RASSF5Q8WWW0 418 aa14.07□□□□□ -0.16
DDX54-204ENST00000546898 S100PBPQ96BU1 408 aa14.07□□□□□ -0.16
DDX54-204ENST00000546898 ZNF775Q96BV0 537 aaPredicted RBP14.07□□□□□ -0.16
DDX54-204ENST00000546898 LIME1Q9H400 295 aa14.07□□□□□ -0.16
DDX54-204ENST00000546898 PARPBPQ9NWS1 579 aa14.07□□□□□ -0.16
DDX54-204ENST00000546898 GID8Q9NWU2 228 aa14.07□□□□□ -0.16
DDX54-204ENST00000546898 FLVCR1Q9Y5Y0 555 aa14.07□□□□□ -0.16
DDX54-204ENST00000546898 PRRC2AP48634 2157 aaKnown RBP14.07□□□□□ -0.16
DDX54-204ENST00000546898 A0A1W2PPR1 153 aa14.06□□□□□ -0.16
DDX54-204ENST00000546898 M0QX08 132 aa14.06□□□□□ -0.16
DDX54-204ENST00000546898 FMO6PO60774 539 aa14.06□□□□□ -0.16
DDX54-204ENST00000546898 CCDC22O60826 627 aa14.06□□□□□ -0.16
DDX54-204ENST00000546898 FZD7O75084 574 aa14.06□□□□□ -0.16
DDX54-204ENST00000546898 EDNRAP25101 427 aa14.06□□□□□ -0.16
DDX54-204ENST00000546898 GZMMP51124 257 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms